RNA–Protein interactions for RNA: ENST00000544693.5

NPIPB4-220, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-220ENST00000544693 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
NPIPB4-220ENST00000544693 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
NPIPB4-220ENST00000544693 SENP3Q9H4L4 574 aaPredicted RBP18.02■□□□□ 0.48
NPIPB4-220ENST00000544693 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
NPIPB4-220ENST00000544693 FOXD1Q16676 465 aa16.9■□□□□ 0.3
NPIPB4-220ENST00000544693 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
NPIPB4-220ENST00000544693 MSH5O43196 834 aa15.93■□□□□ 0.14
NPIPB4-220ENST00000544693 PIAS4Q8N2W9 510 aaPredicted RBP15.62■□□□□ 0.09
NPIPB4-220ENST00000544693 PPP6R1Q9UPN7 881 aa15.47■□□□□ 0.07
NPIPB4-220ENST00000544693 PLPPR3Q6T4P5 718 aa15.39■□□□□ 0.05
NPIPB4-220ENST00000544693 ADRA2BP18089 450 aa15.35■□□□□ 0.05
NPIPB4-220ENST00000544693 NISCHQ9Y2I1 1504 aa14.56□□□□□ -0.08
NPIPB4-220ENST00000544693 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
NPIPB4-220ENST00000544693 DMRT2Q9Y5R5 561 aa14.25□□□□□ -0.13
NPIPB4-220ENST00000544693 SCAF1Q9H7N4 1312 aaKnown RBP13.95□□□□□ -0.18
NPIPB4-220ENST00000544693 CACNB1Q02641 598 aaPredicted RBP13.92□□□□□ -0.18
NPIPB4-220ENST00000544693 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
NPIPB4-220ENST00000544693 DCAF8L1A6NGE4 600 aa13.56□□□□□ -0.24
NPIPB4-220ENST00000544693 HOXD11P31277 338 aaPredicted RBP13.56□□□□□ -0.24
NPIPB4-220ENST00000544693 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
NPIPB4-220ENST00000544693 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
NPIPB4-220ENST00000544693 CNKSR2Q8WXI2 1034 aa13.3□□□□□ -0.28
NPIPB4-220ENST00000544693 RNF216Q9NWF9 866 aaPredicted RBP13.3□□□□□ -0.28
NPIPB4-220ENST00000544693 DNAJC5BQ9UF47 199 aa13.19□□□□□ -0.3
NPIPB4-220ENST00000544693 CCDC180Q9P1Z9 1646 aa13.11□□□□□ -0.31
NPIPB4-220ENST00000544693 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.82□□□□□ -0.36
NPIPB4-220ENST00000544693 NCBP3Q53F19 620 aaKnown RBP12.72□□□□□ -0.37
NPIPB4-220ENST00000544693 POTEHQ6S545 545 aa12.72□□□□□ -0.37
NPIPB4-220ENST00000544693 NPM3O75607 178 aaKnown RBP12.63□□□□□ -0.39
NPIPB4-220ENST00000544693 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
NPIPB4-220ENST00000544693 DSG3P32926 999 aa12.58□□□□□ -0.4
NPIPB4-220ENST00000544693 ABCC9O60706 1549 aa12.55□□□□□ -0.4
NPIPB4-220ENST00000544693 SPINK5Q9NQ38 1064 aaPredicted RBP12.53□□□□□ -0.4
NPIPB4-220ENST00000544693 CAPN15O75808 1086 aa12.45□□□□□ -0.42
NPIPB4-220ENST00000544693 RB1CC1Q8TDY2 1594 aa12.26□□□□□ -0.45
NPIPB4-220ENST00000544693 NACADO15069 1562 aa12.25□□□□□ -0.45
NPIPB4-220ENST00000544693 SLC4A2P04920 1241 aa12.21□□□□□ -0.45
NPIPB4-220ENST00000544693 MYO15BQ96JP2 1530 aa12.2□□□□□ -0.46
NPIPB4-220ENST00000544693 ABCB7O75027 752 aa12.16□□□□□ -0.46
NPIPB4-220ENST00000544693 TRHP20396 242 aaPredicted RBP12.15□□□□□ -0.46
NPIPB4-220ENST00000544693 ZCCHC6Q5VYS8 1495 aaKnown RBP12.14□□□□□ -0.47
NPIPB4-220ENST00000544693 DCAF1Q9Y4B6 1507 aa12.14□□□□□ -0.47
NPIPB4-220ENST00000544693 ZNF219Q9P2Y4 722 aaPredicted RBP12.12□□□□□ -0.47
NPIPB4-220ENST00000544693 APLP2Q06481 763 aa12.07□□□□□ -0.48
NPIPB4-220ENST00000544693 DCAF8L2P0C7V8 631 aa12.04□□□□□ -0.48
NPIPB4-220ENST00000544693 UNC13AQ9UPW8 1703 aa12□□□□□ -0.49
NPIPB4-220ENST00000544693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.97□□□□□ -0.49
NPIPB4-220ENST00000544693 KCNA4P22459 653 aa11.97□□□□□ -0.49
NPIPB4-220ENST00000544693 HNRNPUL2Q1KMD3 747 aaKnown RBP11.97□□□□□ -0.49
NPIPB4-220ENST00000544693 RBM42Q9BTD8 480 aaKnown RBP11.94□□□□□ -0.5
NPIPB4-220ENST00000544693 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
NPIPB4-220ENST00000544693 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
NPIPB4-220ENST00000544693 SHROOM4Q9ULL8 1493 aa11.83□□□□□ -0.52
NPIPB4-220ENST00000544693 SCRIBQ14160 1630 aa11.81□□□□□ -0.52
NPIPB4-220ENST00000544693 BICRAQ9NZM4 1560 aa11.76□□□□□ -0.53
NPIPB4-220ENST00000544693 POLA2Q14181 598 aa11.75□□□□□ -0.53
NPIPB4-220ENST00000544693 SP7Q8TDD2 431 aaPredicted RBP11.71□□□□□ -0.53
NPIPB4-220ENST00000544693 MYCNP04198 464 aaPredicted RBP11.66□□□□□ -0.54
NPIPB4-220ENST00000544693 PABPN1Q86U42 306 aaKnown RBP eCLIP11.63□□□□□ -0.55
NPIPB4-220ENST00000544693 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
NPIPB4-220ENST00000544693 PIP4P2Q8N4L2 257 aa11.54□□□□□ -0.56
NPIPB4-220ENST00000544693 REM2Q8IYK8 340 aaPredicted RBP11.5□□□□□ -0.57
NPIPB4-220ENST00000544693 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
NPIPB4-220ENST00000544693 ATF5Q9Y2D1 282 aaPredicted RBP11.49□□□□□ -0.57
NPIPB4-220ENST00000544693 ZBTB12Q9Y330 459 aaPredicted RBP11.44□□□□□ -0.58
NPIPB4-220ENST00000544693 CC2D2AQ9P2K1 1620 aa11.44□□□□□ -0.58
NPIPB4-220ENST00000544693 FXR2P51116 673 aaKnown RBP eCLIP11.41□□□□□ -0.58
NPIPB4-220ENST00000544693 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
NPIPB4-220ENST00000544693 PITPNM1O00562 1244 aa11.4□□□□□ -0.58
NPIPB4-220ENST00000544693 HAX1O00165 279 aa11.38□□□□□ -0.59
NPIPB4-220ENST00000544693 BAZ1AQ9NRL2 1556 aaPredicted RBP11.36□□□□□ -0.59
NPIPB4-220ENST00000544693 SMARCA4P51532 1647 aa11.34□□□□□ -0.59
NPIPB4-220ENST00000544693 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
NPIPB4-220ENST00000544693 EVX2Q03828 476 aa11.32□□□□□ -0.6
NPIPB4-220ENST00000544693 SMARCA2P51531 1590 aa11.31□□□□□ -0.6
NPIPB4-220ENST00000544693 FOXD4L1Q9NU39 408 aa11.29□□□□□ -0.6
NPIPB4-220ENST00000544693 PEG3Q9GZU2 1588 aa11.25□□□□□ -0.61
NPIPB4-220ENST00000544693 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
NPIPB4-220ENST00000544693 NCAPD3P42695 1498 aa11.21□□□□□ -0.61
NPIPB4-220ENST00000544693 ATAD2BQ9ULI0 1458 aa11.19□□□□□ -0.62
NPIPB4-220ENST00000544693 SLC4A1APQ9BWU0 796 aaKnown RBP11.16□□□□□ -0.62
NPIPB4-220ENST00000544693 BAZ1BQ9UIG0 1483 aaKnown RBP11.16□□□□□ -0.62
NPIPB4-220ENST00000544693 MROH2BQ7Z745 1585 aa11.16□□□□□ -0.62
NPIPB4-220ENST00000544693 WIZO95785 1651 aa11.1□□□□□ -0.63
NPIPB4-220ENST00000544693 SPDYE2BA6NHP3 402 aa11.09□□□□□ -0.63
NPIPB4-220ENST00000544693 SPDYE6P0CI01 402 aa11.09□□□□□ -0.63
NPIPB4-220ENST00000544693 SPDYE2Q495Y8 402 aa11.09□□□□□ -0.63
NPIPB4-220ENST00000544693 PRKAR2AP13861 404 aaKnown RBP11.07□□□□□ -0.64
NPIPB4-220ENST00000544693 C19orf67A6NJJ6 358 aa11.06□□□□□ -0.64
NPIPB4-220ENST00000544693 ZBTB22O15209 634 aa11.04□□□□□ -0.64
NPIPB4-220ENST00000544693 RSF1Q96T23 1441 aaPredicted RBP11.03□□□□□ -0.64
NPIPB4-220ENST00000544693 TOP2AP11388 1531 aaKnown RBP11.03□□□□□ -0.64
NPIPB4-220ENST00000544693 LAMC3Q9Y6N6 1575 aa11.02□□□□□ -0.65
NPIPB4-220ENST00000544693 PRDM2Q13029 1718 aa10.99□□□□□ -0.65
NPIPB4-220ENST00000544693 GABBR2O75899 941 aa10.99□□□□□ -0.65
NPIPB4-220ENST00000544693 ATXN8OSP0DMR3 200 aa10.99□□□□□ -0.65
NPIPB4-220ENST00000544693 SPDYE1Q8NFV5 336 aaPredicted RBP10.98□□□□□ -0.65
NPIPB4-220ENST00000544693 LHX8Q68G74 356 aa10.96□□□□□ -0.65
NPIPB4-220ENST00000544693 CLEC11AQ9Y240 323 aa10.96□□□□□ -0.65
NPIPB4-220ENST00000544693 FBLN2P98095 1184 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms