RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 ARHGEF11O15085 1522 aa17.15■□□□□ 0.34
MDH1-216ENST00000544381 IFT140Q96RY7 1462 aa17.13■□□□□ 0.33
MDH1-216ENST00000544381 TOPBP1Q92547 1522 aa17.13■□□□□ 0.33
MDH1-216ENST00000544381 EIF4G3O43432 1585 aaKnown RBP17.11■□□□□ 0.33
MDH1-216ENST00000544381 CCDC88BA6NC98 1476 aa17.11■□□□□ 0.33
MDH1-216ENST00000544381 CHD1O14646 1710 aa17.06■□□□□ 0.32
MDH1-216ENST00000544381 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
MDH1-216ENST00000544381 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
MDH1-216ENST00000544381 ARAP1Q96P48 1450 aa16.99■□□□□ 0.31
MDH1-216ENST00000544381 AQRO60306 1485 aaKnown RBP eCLIP16.97■□□□□ 0.316e-7■■■■□ 21.6
MDH1-216ENST00000544381 ABCC8Q09428 1581 aa16.96■□□□□ 0.31
MDH1-216ENST00000544381 POLA1P09884 1462 aaPredicted RBP16.94■□□□□ 0.3
MDH1-216ENST00000544381 ZBTB12Q9Y330 459 aaPredicted RBP16.92■□□□□ 0.3
MDH1-216ENST00000544381 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
MDH1-216ENST00000544381 RAD54L2Q9Y4B4 1467 aa16.87■□□□□ 0.29
MDH1-216ENST00000544381 CLASP1Q7Z460 1538 aa16.86■□□□□ 0.29
MDH1-216ENST00000544381 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
MDH1-216ENST00000544381 TDRD9Q8NDG6 1382 aaKnown RBP16.79■□□□□ 0.28
MDH1-216ENST00000544381 RBM42Q9BTD8 480 aaKnown RBP16.79■□□□□ 0.28
MDH1-216ENST00000544381 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
MDH1-216ENST00000544381 FGD5Q6ZNL6 1462 aa16.77■□□□□ 0.27
MDH1-216ENST00000544381 CUX1P39880 1505 aa16.77■□□□□ 0.27
MDH1-216ENST00000544381 SOGA1O94964 1423 aa16.76■□□□□ 0.27
MDH1-216ENST00000544381 FBLN2P98095 1184 aa16.75■□□□□ 0.27
MDH1-216ENST00000544381 MAGI1Q96QZ7 1491 aaPredicted RBP16.72■□□□□ 0.27
MDH1-216ENST00000544381 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
MDH1-216ENST00000544381 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
MDH1-216ENST00000544381 GRIN2BQ13224 1484 aa16.68■□□□□ 0.26
MDH1-216ENST00000544381 SYNJ2O15056 1496 aa16.67■□□□□ 0.26
MDH1-216ENST00000544381 ABCA5Q8WWZ7 1642 aa16.63■□□□□ 0.25
MDH1-216ENST00000544381 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
MDH1-216ENST00000544381 GAPVD1Q14C86 1478 aa16.6■□□□□ 0.25
MDH1-216ENST00000544381 CHMP7Q8WUX9 453 aaPredicted RBP16.6■□□□□ 0.25
MDH1-216ENST00000544381 POTEHQ6S545 545 aa16.58■□□□□ 0.24
MDH1-216ENST00000544381 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
MDH1-216ENST00000544381 WRNQ14191 1432 aaPredicted RBP eCLIP16.55■□□□□ 0.24
MDH1-216ENST00000544381 MKRN4PQ13434 485 aaPredicted RBP16.54■□□□□ 0.24
MDH1-216ENST00000544381 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
MDH1-216ENST00000544381 CEP170Q5SW79 1584 aa16.51■□□□□ 0.23
MDH1-216ENST00000544381 SHROOM2Q13796 1616 aa16.5■□□□□ 0.23
MDH1-216ENST00000544381 GRIN2AQ12879 1464 aa16.49■□□□□ 0.23
MDH1-216ENST00000544381 NUP160Q12769 1436 aa16.49■□□□□ 0.23
MDH1-216ENST00000544381 AKT1S1Q96B36 256 aa16.48■□□□□ 0.23
MDH1-216ENST00000544381 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
MDH1-216ENST00000544381 BIVM-ERCC5R4GMW8 1640 aa16.43■□□□□ 0.22
MDH1-216ENST00000544381 SPDYE2BA6NHP3 402 aa16.42■□□□□ 0.22
MDH1-216ENST00000544381 SPDYE6P0CI01 402 aa16.42■□□□□ 0.22
MDH1-216ENST00000544381 SPDYE2Q495Y8 402 aa16.42■□□□□ 0.22
MDH1-216ENST00000544381 FAM9AQ8IZU1 332 aaPredicted RBP16.41■□□□□ 0.22
MDH1-216ENST00000544381 TOP2BQ02880 1626 aa16.41■□□□□ 0.22
MDH1-216ENST00000544381 FHAD1B1AJZ9 1412 aa16.36■□□□□ 0.21
MDH1-216ENST00000544381 ERICH3Q5RHP9 1530 aa16.34■□□□□ 0.21
MDH1-216ENST00000544381 REM2Q8IYK8 340 aaPredicted RBP16.32■□□□□ 0.2
MDH1-216ENST00000544381 EEA1Q15075 1411 aa16.31■□□□□ 0.2
MDH1-216ENST00000544381 LOC105371045A0A1W2PR82 267 aa16.3■□□□□ 0.2
MDH1-216ENST00000544381 RUSC2Q8N2Y8 1516 aa16.3■□□□□ 0.2
MDH1-216ENST00000544381 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
MDH1-216ENST00000544381 PRG4Q92954 1404 aaPredicted RBP16.27■□□□□ 0.2
MDH1-216ENST00000544381 CHRDL2Q6WN34 429 aa16.26■□□□□ 0.19
MDH1-216ENST00000544381 ADCY10Q96PN6 1610 aa16.24■□□□□ 0.19
MDH1-216ENST00000544381 DIP2BQ9P265 1576 aa16.23■□□□□ 0.19
MDH1-216ENST00000544381 ABCC10Q5T3U5 1492 aa16.22■□□□□ 0.19
MDH1-216ENST00000544381 MAPKBP1O60336 1514 aa16.22■□□□□ 0.19
MDH1-216ENST00000544381 SSUH2Q9Y2M2 353 aa16.21■□□□□ 0.19
MDH1-216ENST00000544381 JPH4Q96JJ6 628 aa16.19■□□□□ 0.18
MDH1-216ENST00000544381 KIF27Q86VH2 1401 aa16.16■□□□□ 0.18
MDH1-216ENST00000544381 PITPNM1O00562 1244 aa16.13■□□□□ 0.17
MDH1-216ENST00000544381 FAM69CQ0P6D2 419 aa16.11■□□□□ 0.17
MDH1-216ENST00000544381 KDM6BO15054 1643 aa16.1■□□□□ 0.17
MDH1-216ENST00000544381 TSPOAP1O95153 1857 aa16.1■□□□□ 0.17
MDH1-216ENST00000544381 KIAA0586Q9BVV6 1533 aa16.08■□□□□ 0.17
MDH1-216ENST00000544381 KDM4FA0A1W2PPD8 638 aa16.08■□□□□ 0.16
MDH1-216ENST00000544381 KIF21BO75037 1637 aa16.07■□□□□ 0.16
MDH1-216ENST00000544381 PPRC1Q5VV67 1664 aaKnown RBP16.07■□□□□ 0.16
MDH1-216ENST00000544381 GOLGA3Q08378 1498 aa16.07■□□□□ 0.16
MDH1-216ENST00000544381 IGF1RP08069 1367 aa16.05■□□□□ 0.16
MDH1-216ENST00000544381 CUL7Q14999 1698 aa16.05■□□□□ 0.16
MDH1-216ENST00000544381 UBTFP17480 764 aaKnown RBP16.04■□□□□ 0.16
MDH1-216ENST00000544381 SPDYE1Q8NFV5 336 aaPredicted RBP16.04■□□□□ 0.16
MDH1-216ENST00000544381 TNIKQ9UKE5 1360 aa16.01■□□□□ 0.15
MDH1-216ENST00000544381 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
MDH1-216ENST00000544381 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
MDH1-216ENST00000544381 PRXQ9BXM0 1461 aa15.99■□□□□ 0.15
MDH1-216ENST00000544381 RAPGEF2Q9Y4G8 1499 aa15.97■□□□□ 0.15
MDH1-216ENST00000544381 NPM1P06748 294 aaKnown RBP eCLIP15.96■□□□□ 0.15
MDH1-216ENST00000544381 ABCC2Q92887 1545 aa15.96■□□□□ 0.15
MDH1-216ENST00000544381 GLI2P10070 1586 aa15.96■□□□□ 0.15
MDH1-216ENST00000544381 PIP4P2Q8N4L2 257 aa15.94■□□□□ 0.14
MDH1-216ENST00000544381 PTPRGP23470 1445 aa15.94■□□□□ 0.14
MDH1-216ENST00000544381 CARMIL1Q5VZK9 1371 aa15.94■□□□□ 0.14
MDH1-216ENST00000544381 COL17A1Q9UMD9 1497 aaPredicted RBP15.93■□□□□ 0.14
MDH1-216ENST00000544381 ASXL2Q76L83 1435 aa15.93■□□□□ 0.14
MDH1-216ENST00000544381 IQGAP2Q13576 1575 aa15.91■□□□□ 0.14
MDH1-216ENST00000544381 DISP1Q96F81 1524 aa15.91■□□□□ 0.14
MDH1-216ENST00000544381 UHRF1BP1LA0JNW5 1464 aa15.91■□□□□ 0.14
MDH1-216ENST00000544381 FXR2P51116 673 aaKnown RBP eCLIP15.91■□□□□ 0.146e-6■■■■□ 22.2
MDH1-216ENST00000544381 CEP162Q5TB80 1403 aa15.9■□□□□ 0.14
MDH1-216ENST00000544381 MAP3K4Q9Y6R4 1608 aa15.9■□□□□ 0.14
MDH1-216ENST00000544381 ADGRL1O94910 1474 aa15.89■□□□□ 0.13
MDH1-216ENST00000544381 PLB1Q6P1J6 1458 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms