RNA–Protein interactions for RNA: ENST00000544307.1

PDE3A-203, Transcript of phosphodiesterase 3A, humanhuman

TSL 1 (best)

Gene PDE3A, Length 2,969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-203ENST00000544307 WDR97A6NE52 1622 aa9.15□□□□□ -0.94
PDE3A-203ENST00000544307 SETD5Q9C0A6 1442 aa9.14□□□□□ -0.95
PDE3A-203ENST00000544307 PHLDB1Q86UU1 1377 aa9.13□□□□□ -0.95
PDE3A-203ENST00000544307 PRKCSHP14314 528 aaPredicted RBP9.12□□□□□ -0.95
PDE3A-203ENST00000544307 BCL11AQ9H165 835 aa9.12□□□□□ -0.95
PDE3A-203ENST00000544307 TIAM1Q13009 1591 aa9.11□□□□□ -0.95
PDE3A-203ENST00000544307 IGF1RP08069 1367 aa9.11□□□□□ -0.95
PDE3A-203ENST00000544307 HIRIP3Q9BW71 556 aaPredicted RBP9.11□□□□□ -0.95
PDE3A-203ENST00000544307 MAP3K1Q13233 1512 aa9.1□□□□□ -0.95
PDE3A-203ENST00000544307 LRRC9Q6ZRR7 1453 aa9.1□□□□□ -0.95
PDE3A-203ENST00000544307 RBM19Q9Y4C8 960 aaKnown RBP9.09□□□□□ -0.95
PDE3A-203ENST00000544307 NCAPD3P42695 1498 aa9.09□□□□□ -0.95
PDE3A-203ENST00000544307 SENP3Q9H4L4 574 aaPredicted RBP9.09□□□□□ -0.95
PDE3A-203ENST00000544307 CFTRP13569 1480 aa9.08□□□□□ -0.96
PDE3A-203ENST00000544307 TRIM52Q96A61 297 aa9.08□□□□□ -0.96
PDE3A-203ENST00000544307 FAM50AQ14320 339 aaKnown RBP9.07□□□□□ -0.96
PDE3A-203ENST00000544307 CCER2I3L3R5 266 aa9.07□□□□□ -0.96
PDE3A-203ENST00000544307 NCBP3Q53F19 620 aaKnown RBP9.06□□□□□ -0.96
PDE3A-203ENST00000544307 HMGXB3Q12766 1538 aa9.06□□□□□ -0.96
PDE3A-203ENST00000544307 ERICH6Q7L0X2 663 aa9.06□□□□□ -0.96
PDE3A-203ENST00000544307 TIMELESSQ9UNS1 1208 aa9.06□□□□□ -0.96
PDE3A-203ENST00000544307 CARMIL1Q5VZK9 1371 aa9.04□□□□□ -0.96
PDE3A-203ENST00000544307 MSH5O43196 834 aa9.03□□□□□ -0.96
PDE3A-203ENST00000544307 P3H3Q8IVL6 736 aa9.03□□□□□ -0.96
PDE3A-203ENST00000544307 ANP32CO43423 234 aa9.03□□□□□ -0.96
PDE3A-203ENST00000544307 NEFLP07196 543 aa9.02□□□□□ -0.97
PDE3A-203ENST00000544307 PLPPR3Q6T4P5 718 aa9.02□□□□□ -0.97
PDE3A-203ENST00000544307 PCF11O94913 1555 aaKnown RBP9.01□□□□□ -0.97
PDE3A-203ENST00000544307 PHF23Q9BUL5 403 aaPredicted RBP9□□□□□ -0.97
PDE3A-203ENST00000544307 CFAP43Q8NDM7 1665 aa9□□□□□ -0.97
PDE3A-203ENST00000544307 FHAD1B1AJZ9 1412 aa9□□□□□ -0.97
PDE3A-203ENST00000544307 RTN4Q9NQC3 1192 aaKnown RBP9□□□□□ -0.97
PDE3A-203ENST00000544307 ATP1B4Q9UN42 357 aaPredicted RBP8.99□□□□□ -0.97
PDE3A-203ENST00000544307 PTPRKQ15262 1439 aa8.98□□□□□ -0.97
PDE3A-203ENST00000544307 FHOD3Q2V2M9 1422 aa8.98□□□□□ -0.97
PDE3A-203ENST00000544307 FGD5Q6ZNL6 1462 aa8.98□□□□□ -0.97
PDE3A-203ENST00000544307 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.98□□□□□ -0.97
PDE3A-203ENST00000544307 KDM5BQ9UGL1 1544 aa8.97□□□□□ -0.97
PDE3A-203ENST00000544307 TONSLQ96HA7 1378 aa8.96□□□□□ -0.98
PDE3A-203ENST00000544307 IRX6P78412 446 aaPredicted RBP8.96□□□□□ -0.98
PDE3A-203ENST00000544307 AQRO60306 1485 aaKnown RBP eCLIP8.95□□□□□ -0.98
PDE3A-203ENST00000544307 CASKIN1Q8WXD9 1431 aa8.95□□□□□ -0.98
PDE3A-203ENST00000544307 FGD6Q6ZV73 1430 aa8.95□□□□□ -0.98
PDE3A-203ENST00000544307 CCDC18Q5T9S5 1454 aa8.94□□□□□ -0.98
PDE3A-203ENST00000544307 FYCO1Q9BQS8 1478 aa8.94□□□□□ -0.98
PDE3A-203ENST00000544307 CADPSQ9ULU8 1353 aa8.94□□□□□ -0.98
PDE3A-203ENST00000544307 HNRNPUQ00839 825 aaKnown RBP eCLIP8.94□□□□□ -0.98
PDE3A-203ENST00000544307 UACAQ9BZF9 1416 aa8.93□□□□□ -0.98
PDE3A-203ENST00000544307 HFM1A2PYH4 1435 aa8.93□□□□□ -0.98
PDE3A-203ENST00000544307 FANCIQ9NVI1 1328 aa8.93□□□□□ -0.98
PDE3A-203ENST00000544307 CCDC184Q52MB2 194 aa8.92□□□□□ -0.98
PDE3A-203ENST00000544307 WASHC2AQ641Q2 1341 aa8.92□□□□□ -0.98
PDE3A-203ENST00000544307 NAIPQ13075 1403 aa8.92□□□□□ -0.98
PDE3A-203ENST00000544307 PTPN23Q9H3S7 1636 aa8.91□□□□□ -0.98
PDE3A-203ENST00000544307 PRDM2Q13029 1718 aa8.91□□□□□ -0.98
PDE3A-203ENST00000544307 RAD54L2Q9Y4B4 1467 aa8.9□□□□□ -0.98
PDE3A-203ENST00000544307 HSPA5P11021 654 aaKnown RBP8.9□□□□□ -0.98
PDE3A-203ENST00000544307 SNAPC4Q5SXM2 1469 aa8.9□□□□□ -0.98
PDE3A-203ENST00000544307 EFCAB5A4FU69 1503 aa8.89□□□□□ -0.99
PDE3A-203ENST00000544307 DENND4BO75064 1496 aaPredicted RBP8.89□□□□□ -0.99
PDE3A-203ENST00000544307 CDK11AQ9UQ88 783 aaPredicted RBP8.88□□□□□ -0.99
PDE3A-203ENST00000544307 C11orf95C9JLR9 678 aaPredicted RBP8.88□□□□□ -0.99
PDE3A-203ENST00000544307 MTUS2Q5JR59 1369 aa8.87□□□□□ -0.99
PDE3A-203ENST00000544307 ABCA10Q8WWZ4 1543 aa8.86□□□□□ -0.99
PDE3A-203ENST00000544307 NCOA2Q15596 1464 aa8.86□□□□□ -0.99
PDE3A-203ENST00000544307 MYOM3Q5VTT5 1437 aa8.86□□□□□ -0.99
PDE3A-203ENST00000544307 FMN1Q68DA7 1419 aa8.86□□□□□ -0.99
PDE3A-203ENST00000544307 PPP4R2Q9NY27 417 aa8.85□□□□□ -0.99
PDE3A-203ENST00000544307 POLA1P09884 1462 aaPredicted RBP8.85□□□□□ -0.99
PDE3A-203ENST00000544307 FANCD2Q9BXW9 1451 aa8.85□□□□□ -0.99
PDE3A-203ENST00000544307 ERICH6BQ5W0A0 696 aa8.85□□□□□ -0.99
PDE3A-203ENST00000544307 RRP7BPQ9NSQ0 103 aa8.85□□□□□ -0.99
PDE3A-203ENST00000544307 LRRIQ1Q96JM4 1722 aa8.84□□□□□ -0.99
PDE3A-203ENST00000544307 GRIN2BQ13224 1484 aa8.84□□□□□ -1
PDE3A-203ENST00000544307 CNTLNQ9NXG0 1405 aa8.83□□□□□ -1
PDE3A-203ENST00000544307 PRKRIP1Q9H875 184 aaPredicted RBP8.83□□□□□ -1
PDE3A-203ENST00000544307 B4GALNT3Q6L9W6 998 aa8.83□□□□□ -1
PDE3A-203ENST00000544307 CHIC2Q9UKJ5 165 aa8.83□□□□□ -1
PDE3A-203ENST00000544307 EIF4G2P78344 907 aaKnown RBP eCLIP8.82□□□□□ -1
PDE3A-203ENST00000544307 TOPBP1Q92547 1522 aa8.82□□□□□ -1
PDE3A-203ENST00000544307 KDM6BO15054 1643 aa8.82□□□□□ -1
PDE3A-203ENST00000544307 L3MBTL2Q969R5 705 aa8.82□□□□□ -1
PDE3A-203ENST00000544307 MAGI3Q5TCQ9 1506 aa8.82□□□□□ -1
PDE3A-203ENST00000544307 DNMBPQ6XZF7 1577 aa8.82□□□□□ -1
PDE3A-203ENST00000544307 FAM9BQ8IZU0 186 aa8.82□□□□□ -1
PDE3A-203ENST00000544307 ARHGEF11O15085 1522 aa8.81□□□□□ -1
PDE3A-203ENST00000544307 CCDC7Q96M83 1385 aa8.81□□□□□ -1
PDE3A-203ENST00000544307 NCOA1Q15788 1441 aa8.81□□□□□ -1
PDE3A-203ENST00000544307 CTTNBP2Q8WZ74 1663 aa8.81□□□□□ -1
PDE3A-203ENST00000544307 CC2D2AQ9P2K1 1620 aa8.81□□□□□ -1
PDE3A-203ENST00000544307 SAMD9Q5K651 1589 aa8.81□□□□□ -1
PDE3A-203ENST00000544307 FOXD1Q16676 465 aa8.81□□□□□ -1
PDE3A-203ENST00000544307 UGGT2Q9NYU1 1516 aa8.8□□□□□ -1
PDE3A-203ENST00000544307 NBPF8Q3BBV2 869 aa8.8□□□□□ -1
PDE3A-203ENST00000544307 CUL7Q14999 1698 aa8.8□□□□□ -1
PDE3A-203ENST00000544307 MPHOSPH9Q99550 1183 aa8.8□□□□□ -1
PDE3A-203ENST00000544307 ZBED9Q6R2W3 1325 aa8.8□□□□□ -1
PDE3A-203ENST00000544307 TCOF1Q13428 1488 aaKnown RBP8.79□□□□□ -1
PDE3A-203ENST00000544307 MRS2Q9HD23 443 aa8.79□□□□□ -1
PDE3A-203ENST00000544307 AMER1Q5JTC6 1135 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms