RNA–Protein interactions for RNA: ENST00000544307.1

PDE3A-203, Transcript of phosphodiesterase 3A, humanhuman

TSL 1 (best)

Gene PDE3A, Length 2,969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-203ENST00000544307 NISCHQ9Y2I1 1504 aa12.68□□□□□ -0.38
PDE3A-203ENST00000544307 SHROOM4Q9ULL8 1493 aa11.05□□□□□ -0.64
PDE3A-203ENST00000544307 SUPT5HO00267 1087 aaKnown RBP10.93□□□□□ -0.66
PDE3A-203ENST00000544307 MYO15BQ96JP2 1530 aa10.8□□□□□ -0.68
PDE3A-203ENST00000544307 HRCP23327 699 aa10.79□□□□□ -0.68
PDE3A-203ENST00000544307 ZCCHC6Q5VYS8 1495 aaKnown RBP10.77□□□□□ -0.68
PDE3A-203ENST00000544307 CHIC1Q5VXU3 224 aa10.75□□□□□ -0.69
PDE3A-203ENST00000544307 AEBP2Q6ZN18 517 aaPredicted RBP10.7□□□□□ -0.7
PDE3A-203ENST00000544307 PCGF6Q9BYE7 350 aa10.63□□□□□ -0.71
PDE3A-203ENST00000544307 PPARGC1BQ86YN6 1023 aaKnown RBP10.59□□□□□ -0.71
PDE3A-203ENST00000544307 CCDC180Q9P1Z9 1646 aa10.59□□□□□ -0.71
PDE3A-203ENST00000544307 DCAF8L2P0C7V8 631 aa10.49□□□□□ -0.73
PDE3A-203ENST00000544307 LOC105371045A0A1W2PR82 267 aa10.48□□□□□ -0.73
PDE3A-203ENST00000544307 DCAF1Q9Y4B6 1507 aa10.48□□□□□ -0.73
PDE3A-203ENST00000544307 TRIM26Q12899 539 aaPredicted RBP10.34□□□□□ -0.75
PDE3A-203ENST00000544307 ABCC9O60706 1549 aa10.19□□□□□ -0.78
PDE3A-203ENST00000544307 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
PDE3A-203ENST00000544307 RSF1Q96T23 1441 aaPredicted RBP10.17□□□□□ -0.78
PDE3A-203ENST00000544307 ZEB1P37275 1124 aaPredicted RBP10.16□□□□□ -0.78
PDE3A-203ENST00000544307 TRIM41Q8WV44 630 aa10.12□□□□□ -0.79
PDE3A-203ENST00000544307 SCAF1Q9H7N4 1312 aaKnown RBP10.12□□□□□ -0.79
PDE3A-203ENST00000544307 FAM9AQ8IZU1 332 aaPredicted RBP10.1□□□□□ -0.79
PDE3A-203ENST00000544307 RB1CC1Q8TDY2 1594 aa10.07□□□□□ -0.8
PDE3A-203ENST00000544307 SCRIBQ14160 1630 aa10.04□□□□□ -0.8
PDE3A-203ENST00000544307 PELP1Q8IZL8 1130 aaKnown RBP10.03□□□□□ -0.8
PDE3A-203ENST00000544307 EHMT2Q96KQ7 1210 aa10.03□□□□□ -0.8
PDE3A-203ENST00000544307 CECR2Q9BXF3 1484 aa9.95□□□□□ -0.82
PDE3A-203ENST00000544307 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.93□□□□□ -0.82
PDE3A-203ENST00000544307 MROH2BQ7Z745 1585 aa9.91□□□□□ -0.82
PDE3A-203ENST00000544307 NEUROD1Q13562 356 aa9.9□□□□□ -0.82
PDE3A-203ENST00000544307 ACIN1Q9UKV3 1341 aaKnown RBP9.9□□□□□ -0.83
PDE3A-203ENST00000544307 CCER1Q8TC90 406 aaPredicted RBP9.86□□□□□ -0.83
PDE3A-203ENST00000544307 WIZO95785 1651 aa9.85□□□□□ -0.83
PDE3A-203ENST00000544307 EIF4G1Q04637 1599 aaKnown RBP9.82□□□□□ -0.84
PDE3A-203ENST00000544307 DIEXFQ68CQ4 756 aaKnown RBP9.81□□□□□ -0.84
PDE3A-203ENST00000544307 GTF3C3Q9Y5Q9 886 aa9.8□□□□□ -0.84
PDE3A-203ENST00000544307 WRNQ14191 1432 aaPredicted RBP eCLIP9.77□□□□□ -0.85
PDE3A-203ENST00000544307 NACADO15069 1562 aa9.77□□□□□ -0.85
PDE3A-203ENST00000544307 BAZ1AQ9NRL2 1556 aaPredicted RBP9.76□□□□□ -0.85
PDE3A-203ENST00000544307 TTBK1Q5TCY1 1321 aaPredicted RBP9.76□□□□□ -0.85
PDE3A-203ENST00000544307 CCDC88BA6NC98 1476 aa9.75□□□□□ -0.85
PDE3A-203ENST00000544307 ABCC8Q09428 1581 aa9.73□□□□□ -0.85
PDE3A-203ENST00000544307 CEP162Q5TB80 1403 aa9.72□□□□□ -0.85
PDE3A-203ENST00000544307 CENPBP07199 599 aaPredicted RBP9.72□□□□□ -0.85
PDE3A-203ENST00000544307 SOGA1O94964 1423 aa9.71□□□□□ -0.86
PDE3A-203ENST00000544307 TNIKQ9UKE5 1360 aa9.69□□□□□ -0.86
PDE3A-203ENST00000544307 ZNF316A6NFI3 1004 aaPredicted RBP9.68□□□□□ -0.86
PDE3A-203ENST00000544307 RUSC2Q8N2Y8 1516 aa9.67□□□□□ -0.86
PDE3A-203ENST00000544307 TOP2AP11388 1531 aaKnown RBP9.66□□□□□ -0.86
PDE3A-203ENST00000544307 CSRNP3Q8WYN3 585 aa9.64□□□□□ -0.87
PDE3A-203ENST00000544307 SMARCA2P51531 1590 aa9.64□□□□□ -0.87
PDE3A-203ENST00000544307 MIER1Q8N108 512 aa9.62□□□□□ -0.87
PDE3A-203ENST00000544307 UBTFP17480 764 aaKnown RBP9.6□□□□□ -0.87
PDE3A-203ENST00000544307 YTHDC1Q96MU7 727 aaKnown RBP9.6□□□□□ -0.87
PDE3A-203ENST00000544307 SMARCA4P51532 1647 aa9.59□□□□□ -0.87
PDE3A-203ENST00000544307 EEA1Q15075 1411 aa9.59□□□□□ -0.87
PDE3A-203ENST00000544307 GOLGA3Q08378 1498 aa9.57□□□□□ -0.88
PDE3A-203ENST00000544307 HNRNPUL2Q1KMD3 747 aaKnown RBP9.56□□□□□ -0.88
PDE3A-203ENST00000544307 MYT1Q01538 1121 aa9.56□□□□□ -0.88
PDE3A-203ENST00000544307 CLIP1P30622 1438 aa9.49□□□□□ -0.89
PDE3A-203ENST00000544307 CEP164Q9UPV0 1460 aa9.48□□□□□ -0.89
PDE3A-203ENST00000544307 VPS8Q8N3P4 1428 aa9.47□□□□□ -0.89
PDE3A-203ENST00000544307 SYNJ1O43426 1573 aa9.47□□□□□ -0.89
PDE3A-203ENST00000544307 KIF21BO75037 1637 aa9.46□□□□□ -0.89
PDE3A-203ENST00000544307 UNC13AQ9UPW8 1703 aa9.44□□□□□ -0.9
PDE3A-203ENST00000544307 RAPGEF2Q9Y4G8 1499 aa9.44□□□□□ -0.9
PDE3A-203ENST00000544307 DHX57Q6P158 1386 aaKnown RBP9.41□□□□□ -0.9
PDE3A-203ENST00000544307 BAZ1BQ9UIG0 1483 aaKnown RBP9.41□□□□□ -0.9
PDE3A-203ENST00000544307 PABPN1Q86U42 306 aaKnown RBP eCLIP9.4□□□□□ -0.9
PDE3A-203ENST00000544307 RANGAP1P46060 587 aaPredicted RBP9.4□□□□□ -0.9
PDE3A-203ENST00000544307 PEG3Q9GZU2 1588 aa9.39□□□□□ -0.91
PDE3A-203ENST00000544307 SUPT16HQ9Y5B9 1047 aaKnown RBP9.39□□□□□ -0.91
PDE3A-203ENST00000544307 APLP2Q06481 763 aa9.38□□□□□ -0.91
PDE3A-203ENST00000544307 BICRAQ9NZM4 1560 aa9.37□□□□□ -0.91
PDE3A-203ENST00000544307 CLSPNQ9HAW4 1339 aa9.37□□□□□ -0.91
PDE3A-203ENST00000544307 KANK4Q5T7N3 995 aaPredicted RBP9.36□□□□□ -0.91
PDE3A-203ENST00000544307 DAXXQ9UER7 740 aaPredicted RBP9.36□□□□□ -0.91
PDE3A-203ENST00000544307 ARAP1Q96P48 1450 aa9.34□□□□□ -0.91
PDE3A-203ENST00000544307 ATAD2BQ9ULI0 1458 aa9.32□□□□□ -0.92
PDE3A-203ENST00000544307 TSHZ2Q9NRE2 1034 aa9.31□□□□□ -0.92
PDE3A-203ENST00000544307 PRXQ9BXM0 1461 aa9.31□□□□□ -0.92
PDE3A-203ENST00000544307 KCNH8Q96L42 1107 aa9.3□□□□□ -0.92
PDE3A-203ENST00000544307 RRBP1Q9P2E9 1410 aaKnown RBP9.3□□□□□ -0.92
PDE3A-203ENST00000544307 TOP2BQ02880 1626 aa9.29□□□□□ -0.92
PDE3A-203ENST00000544307 CUX2O14529 1486 aa9.28□□□□□ -0.92
PDE3A-203ENST00000544307 ERICH3Q5RHP9 1530 aa9.27□□□□□ -0.93
PDE3A-203ENST00000544307 BIVM-ERCC5R4GMW8 1640 aa9.24□□□□□ -0.93
PDE3A-203ENST00000544307 CCNB3Q8WWL7 1395 aa9.24□□□□□ -0.93
PDE3A-203ENST00000544307 MAPKBP1O60336 1514 aa9.22□□□□□ -0.93
PDE3A-203ENST00000544307 ITGAEP38570 1179 aa9.21□□□□□ -0.93
PDE3A-203ENST00000544307 ARHGAP35Q9NRY4 1499 aa9.21□□□□□ -0.93
PDE3A-203ENST00000544307 ANP32EQ9BTT0 268 aa9.21□□□□□ -0.94
PDE3A-203ENST00000544307 RAB3GAP2Q9H2M9 1393 aa9.2□□□□□ -0.94
PDE3A-203ENST00000544307 CUX1P39880 1505 aa9.2□□□□□ -0.94
PDE3A-203ENST00000544307 BCANQ96GW7 911 aa9.18□□□□□ -0.94
PDE3A-203ENST00000544307 KIF27Q86VH2 1401 aa9.17□□□□□ -0.94
PDE3A-203ENST00000544307 DDX10Q13206 875 aaKnown RBP9.16□□□□□ -0.94
PDE3A-203ENST00000544307 SIN3AQ96ST3 1273 aa9.16□□□□□ -0.94
PDE3A-203ENST00000544307 PPP1R15AO75807 674 aaPredicted RBP9.16□□□□□ -0.94
PDE3A-203ENST00000544307 FKBP8Q14318 412 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms