RNA–Protein interactions for RNA: ENST00000543942.6

C12orf56-207, Transcript of chromosome 12 open reading frame 56, humanhuman

APPRIS P1 TSL 5 BASIC

Gene C12orf56, Length 3,242 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-207ENST00000543942 PHLDB1Q86UU1 1377 aa24.36■■□□□ 1.49
C12orf56-207ENST00000543942 IGF1RP08069 1367 aa24.35■■□□□ 1.49
C12orf56-207ENST00000543942 MAPKBP1O60336 1514 aa24.34■■□□□ 1.49
C12orf56-207ENST00000543942 WDR97A6NE52 1622 aa24.31■■□□□ 1.48
C12orf56-207ENST00000543942 CARMIL1Q5VZK9 1371 aa24.31■■□□□ 1.48
C12orf56-207ENST00000543942 NEFLP07196 543 aa24.3■■□□□ 1.48
C12orf56-207ENST00000543942 ANP32CO43423 234 aa24.27■■□□□ 1.48
C12orf56-207ENST00000543942 ANP32EQ9BTT0 268 aa24.26■■□□□ 1.47
C12orf56-207ENST00000543942 PPP1R15AO75807 674 aaPredicted RBP24.25■■□□□ 1.47
C12orf56-207ENST00000543942 NCAPD3P42695 1498 aa24.24■■□□□ 1.47
C12orf56-207ENST00000543942 CFTRP13569 1480 aa24.22■■□□□ 1.47
C12orf56-207ENST00000543942 LRRC9Q6ZRR7 1453 aa24.22■■□□□ 1.47
C12orf56-207ENST00000543942 TIAM1Q13009 1591 aa24.2■■□□□ 1.46
C12orf56-207ENST00000543942 IRX6P78412 446 aaPredicted RBP24.16■■□□□ 1.46
C12orf56-207ENST00000543942 FHOD3Q2V2M9 1422 aa24.16■■□□□ 1.46
C12orf56-207ENST00000543942 TONSLQ96HA7 1378 aa24.11■■□□□ 1.45
C12orf56-207ENST00000543942 RBM19Q9Y4C8 960 aaKnown RBP24.11■■□□□ 1.45
C12orf56-207ENST00000543942 FGD5Q6ZNL6 1462 aa24.09■■□□□ 1.45
C12orf56-207ENST00000543942 HMGXB3Q12766 1538 aa24.09■■□□□ 1.45
C12orf56-207ENST00000543942 FHAD1B1AJZ9 1412 aa24.06■■□□□ 1.44
C12orf56-207ENST00000543942 HNRNPUQ00839 825 aaKnown RBP eCLIP24.06■■□□□ 1.44
C12orf56-207ENST00000543942 CCER2I3L3R5 266 aa24.03■■□□□ 1.44
C12orf56-207ENST00000543942 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
C12orf56-207ENST00000543942 CHIC2Q9UKJ5 165 aa24.02■■□□□ 1.44
C12orf56-207ENST00000543942 TIMELESSQ9UNS1 1208 aa24.01■■□□□ 1.43
C12orf56-207ENST00000543942 PCF11O94913 1555 aaKnown RBP23.99■■□□□ 1.43
C12orf56-207ENST00000543942 RAD54L2Q9Y4B4 1467 aa23.98■■□□□ 1.43
C12orf56-207ENST00000543942 RRP7BPQ9NSQ0 103 aa23.98■■□□□ 1.43
C12orf56-207ENST00000543942 MTUS2Q5JR59 1369 aa23.96■■□□□ 1.43
C12orf56-207ENST00000543942 ARID3CA6NKF2 412 aa23.96■■□□□ 1.43
C12orf56-207ENST00000543942 MAP3K1Q13233 1512 aa23.96■■□□□ 1.43
C12orf56-207ENST00000543942 CNGB1Q14028 1251 aaPredicted RBP23.95■■□□□ 1.42
C12orf56-207ENST00000543942 PTPRKQ15262 1439 aa23.89■■□□□ 1.41
C12orf56-207ENST00000543942 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
C12orf56-207ENST00000543942 FGD6Q6ZV73 1430 aa23.87■■□□□ 1.41
C12orf56-207ENST00000543942 HSPA5P11021 654 aaKnown RBP23.85■■□□□ 1.41
C12orf56-207ENST00000543942 FOXD1Q16676 465 aa23.85■■□□□ 1.41
C12orf56-207ENST00000543942 CCDC184Q52MB2 194 aa23.84■■□□□ 1.41
C12orf56-207ENST00000543942 FAM9BQ8IZU0 186 aa23.83■■□□□ 1.41
C12orf56-207ENST00000543942 CASKIN1Q8WXD9 1431 aa23.82■■□□□ 1.4
C12orf56-207ENST00000543942 MSH5O43196 834 aa23.81■■□□□ 1.4
C12orf56-207ENST00000543942 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
C12orf56-207ENST00000543942 AQRO60306 1485 aaKnown RBP eCLIP23.79■■□□□ 1.4
C12orf56-207ENST00000543942 BCL11AQ9H165 835 aa23.79■■□□□ 1.4
C12orf56-207ENST00000543942 CDK11AQ9UQ88 783 aaPredicted RBP23.79■■□□□ 1.4
C12orf56-207ENST00000543942 WASHC2AQ641Q2 1341 aa23.79■■□□□ 1.4
C12orf56-207ENST00000543942 FYCO1Q9BQS8 1478 aa23.78■■□□□ 1.4
C12orf56-207ENST00000543942 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
C12orf56-207ENST00000543942 CFAP43Q8NDM7 1665 aa23.77■■□□□ 1.4
C12orf56-207ENST00000543942 SENP3-EIF4A1A0A087X0R7 540 aa23.77■■□□□ 1.4
C12orf56-207ENST00000543942 UACAQ9BZF9 1416 aa23.76■■□□□ 1.39
C12orf56-207ENST00000543942 ERICH6Q7L0X2 663 aa23.73■■□□□ 1.39
C12orf56-207ENST00000543942 NAIPQ13075 1403 aa23.72■■□□□ 1.39
C12orf56-207ENST00000543942 EIF4G2P78344 907 aaKnown RBP eCLIP23.72■■□□□ 1.39
C12orf56-207ENST00000543942 FMN1Q68DA7 1419 aa23.72■■□□□ 1.39
C12orf56-207ENST00000543942 POLR3GLQ9BT43 218 aa23.72■■□□□ 1.39
C12orf56-207ENST00000543942 HFM1A2PYH4 1435 aa23.71■■□□□ 1.39
C12orf56-207ENST00000543942 NESP48681 1621 aa23.71■■□□□ 1.39
C12orf56-207ENST00000543942 POLA1P09884 1462 aaPredicted RBP23.71■■□□□ 1.39
C12orf56-207ENST00000543942 C11orf95C9JLR9 678 aaPredicted RBP23.7■■□□□ 1.38
C12orf56-207ENST00000543942 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.69■■□□□ 1.38
C12orf56-207ENST00000543942 B4GALNT3Q6L9W6 998 aa23.69■■□□□ 1.38
C12orf56-207ENST00000543942 L3MBTL2Q969R5 705 aa23.69■■□□□ 1.38
C12orf56-207ENST00000543942 MRS2Q9HD23 443 aa23.68■■□□□ 1.38
C12orf56-207ENST00000543942 NCOA2Q15596 1464 aa23.68■■□□□ 1.38
C12orf56-207ENST00000543942 PTPN23Q9H3S7 1636 aa23.64■■□□□ 1.38
C12orf56-207ENST00000543942 MYOM3Q5VTT5 1437 aa23.64■■□□□ 1.37
C12orf56-207ENST00000543942 TOPBP1Q92547 1522 aa23.63■■□□□ 1.37
C12orf56-207ENST00000543942 MPHOSPH9Q99550 1183 aa23.63■■□□□ 1.37
C12orf56-207ENST00000543942 PRDM2Q13029 1718 aa23.61■■□□□ 1.37
C12orf56-207ENST00000543942 EFCAB5A4FU69 1503 aa23.61■■□□□ 1.37
C12orf56-207ENST00000543942 ABCA10Q8WWZ4 1543 aa23.61■■□□□ 1.37
C12orf56-207ENST00000543942 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
C12orf56-207ENST00000543942 ZNF326Q5BKZ1 582 aaKnown RBP23.58■■□□□ 1.37
C12orf56-207ENST00000543942 PRKRIP1Q9H875 184 aaPredicted RBP23.57■■□□□ 1.36
C12orf56-207ENST00000543942 PPP4R2Q9NY27 417 aa23.56■■□□□ 1.36
C12orf56-207ENST00000543942 NBPF8Q3BBV2 869 aa23.54■■□□□ 1.36
C12orf56-207ENST00000543942 DNMBPQ6XZF7 1577 aa23.53■■□□□ 1.36
C12orf56-207ENST00000543942 CC2D2AQ9P2K1 1620 aa23.52■■□□□ 1.36
C12orf56-207ENST00000543942 KDM5BQ9UGL1 1544 aa23.51■■□□□ 1.35
C12orf56-207ENST00000543942 SLC4A1APQ9BWU0 796 aaKnown RBP23.48■■□□□ 1.35
C12orf56-207ENST00000543942 FANCIQ9NVI1 1328 aa23.48■■□□□ 1.35
C12orf56-207ENST00000543942 DNAJC5BQ9UF47 199 aa23.47■■□□□ 1.35
C12orf56-207ENST00000543942 CCDC7Q96M83 1385 aa23.47■■□□□ 1.35
C12orf56-207ENST00000543942 ZNF644Q9H582 1327 aaPredicted RBP23.47■■□□□ 1.35
C12orf56-207ENST00000543942 CNTLNQ9NXG0 1405 aa23.47■■□□□ 1.35
C12orf56-207ENST00000543942 CTTNBP2Q8WZ74 1663 aa23.46■■□□□ 1.35
C12orf56-207ENST00000543942 GRIN2BQ13224 1484 aa23.45■■□□□ 1.34
C12orf56-207ENST00000543942 DENND4BO75064 1496 aaPredicted RBP23.44■■□□□ 1.34
C12orf56-207ENST00000543942 GAPVD1Q14C86 1478 aa23.44■■□□□ 1.34
C12orf56-207ENST00000543942 KDM6BO15054 1643 aa23.44■■□□□ 1.34
C12orf56-207ENST00000543942 MAGI3Q5TCQ9 1506 aa23.44■■□□□ 1.34
C12orf56-207ENST00000543942 LRRIQ1Q96JM4 1722 aa23.42■■□□□ 1.34
C12orf56-207ENST00000543942 KIF7Q2M1P5 1343 aa23.42■■□□□ 1.34
C12orf56-207ENST00000543942 CUL7Q14999 1698 aa23.42■■□□□ 1.34
C12orf56-207ENST00000543942 SUPT6HQ7KZ85 1726 aaKnown RBP23.42■■□□□ 1.34
C12orf56-207ENST00000543942 URB2Q14146 1524 aaKnown RBP23.4■■□□□ 1.34
C12orf56-207ENST00000543942 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
C12orf56-207ENST00000543942 NBR1Q14596 966 aa23.38■■□□□ 1.33
C12orf56-207ENST00000543942 ZBED9Q6R2W3 1325 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms