RNA–Protein interactions for RNA: ENST00000543770.5

ATP1A3-207, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 2 BASIC

Gene ATP1A3, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-207ENST00000543770 FAM50AQ14320 339 aaKnown RBP15.52■□□□□ 0.07
ATP1A3-207ENST00000543770 MAPKBP1O60336 1514 aa15.51■□□□□ 0.07
ATP1A3-207ENST00000543770 CUX2O14529 1486 aa15.48■□□□□ 0.07
ATP1A3-207ENST00000543770 FKBP8Q14318 412 aa15.47■□□□□ 0.07
ATP1A3-207ENST00000543770 WDR97A6NE52 1622 aa15.45■□□□□ 0.06
ATP1A3-207ENST00000543770 PHLDB1Q86UU1 1377 aa15.45■□□□□ 0.06
ATP1A3-207ENST00000543770 TRIM52Q96A61 297 aa15.44■□□□□ 0.06
ATP1A3-207ENST00000543770 SETD5Q9C0A6 1442 aa15.41■□□□□ 0.06
ATP1A3-207ENST00000543770 IGF1RP08069 1367 aa15.4■□□□□ 0.06
ATP1A3-207ENST00000543770 TIAM1Q13009 1591 aa15.39■□□□□ 0.05
ATP1A3-207ENST00000543770 CFTRP13569 1480 aa15.37■□□□□ 0.05
ATP1A3-207ENST00000543770 LRRC9Q6ZRR7 1453 aa15.37■□□□□ 0.05
ATP1A3-207ENST00000543770 NCAPD3P42695 1498 aa15.36■□□□□ 0.05
ATP1A3-207ENST00000543770 PPP1R15AO75807 674 aaPredicted RBP15.35■□□□□ 0.05
ATP1A3-207ENST00000543770 ANP32EQ9BTT0 268 aa15.35■□□□□ 0.05
ATP1A3-207ENST00000543770 CARMIL1Q5VZK9 1371 aa15.35■□□□□ 0.05
ATP1A3-207ENST00000543770 EIF5BO60841 1220 aaKnown RBP15.33■□□□□ 0.04
ATP1A3-207ENST00000543770 HMGXB3Q12766 1538 aa15.32■□□□□ 0.04
ATP1A3-207ENST00000543770 FHOD3Q2V2M9 1422 aa15.3■□□□□ 0.04
ATP1A3-207ENST00000543770 PCF11O94913 1555 aaKnown RBP15.29■□□□□ 0.04
ATP1A3-207ENST00000543770 FGD5Q6ZNL6 1462 aa15.28■□□□□ 0.04
ATP1A3-207ENST00000543770 ANP32CO43423 234 aa15.28■□□□□ 0.04
ATP1A3-207ENST00000543770 NEFLP07196 543 aa15.27■□□□□ 0.04
ATP1A3-207ENST00000543770 IRX6P78412 446 aaPredicted RBP15.26■□□□□ 0.03
ATP1A3-207ENST00000543770 RBM19Q9Y4C8 960 aaKnown RBP15.24■□□□□ 0.03
ATP1A3-207ENST00000543770 MAP3K1Q13233 1512 aa15.22■□□□□ 0.03
ATP1A3-207ENST00000543770 TONSLQ96HA7 1378 aa15.22■□□□□ 0.03
ATP1A3-207ENST00000543770 FHAD1B1AJZ9 1412 aa15.22■□□□□ 0.03
ATP1A3-207ENST00000543770 RAD54L2Q9Y4B4 1467 aa15.19■□□□□ 0.02
ATP1A3-207ENST00000543770 CADPSQ9ULU8 1353 aa15.18■□□□□ 0.02
ATP1A3-207ENST00000543770 CFAP43Q8NDM7 1665 aa15.18■□□□□ 0.02
ATP1A3-207ENST00000543770 CCER2I3L3R5 266 aa15.17■□□□□ 0.02
ATP1A3-207ENST00000543770 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
ATP1A3-207ENST00000543770 HNRNPUQ00839 825 aaKnown RBP eCLIP15.17■□□□□ 0.02
ATP1A3-207ENST00000543770 CCDC18Q5T9S5 1454 aa15.15■□□□□ 0.02
ATP1A3-207ENST00000543770 TIMELESSQ9UNS1 1208 aa15.13■□□□□ 0.01
ATP1A3-207ENST00000543770 FGD6Q6ZV73 1430 aa15.13■□□□□ 0.01
ATP1A3-207ENST00000543770 CHIC2Q9UKJ5 165 aa15.13■□□□□ 0.01
ATP1A3-207ENST00000543770 MTUS2Q5JR59 1369 aa15.12■□□□□ 0.01
ATP1A3-207ENST00000543770 AQRO60306 1485 aaKnown RBP eCLIP15.12■□□□□ 0.01
ATP1A3-207ENST00000543770 MSH5O43196 834 aa15.11■□□□□ 0.01
ATP1A3-207ENST00000543770 RRP7BPQ9NSQ0 103 aa15.11■□□□□ 0.01
ATP1A3-207ENST00000543770 FYCO1Q9BQS8 1478 aa15.1■□□□□ 0.01
ATP1A3-207ENST00000543770 CASKIN1Q8WXD9 1431 aa15.1■□□□□ 0.01
ATP1A3-207ENST00000543770 PLEKHG5O94827 1062 aa15.09■□□□□ 0.01
ATP1A3-207ENST00000543770 CCDC184Q52MB2 194 aa15.09■□□□□ 0.01
ATP1A3-207ENST00000543770 PRDM2Q13029 1718 aa15.08■□□□□ 0
ATP1A3-207ENST00000543770 ARID3CA6NKF2 412 aa15.08■□□□□ 0
ATP1A3-207ENST00000543770 FANCD2Q9BXW9 1451 aa15.08■□□□□ 0
ATP1A3-207ENST00000543770 FOXD1Q16676 465 aa15.06■□□□□ 0
ATP1A3-207ENST00000543770 WASHC2AQ641Q2 1341 aa15.06■□□□□ 0
ATP1A3-207ENST00000543770 HSPA5P11021 654 aaKnown RBP15.06■□□□□ 0
ATP1A3-207ENST00000543770 UACAQ9BZF9 1416 aa15.06■□□□□ 0
ATP1A3-207ENST00000543770 CNGB1Q14028 1251 aaPredicted RBP15.05■□□□□ -0
ATP1A3-207ENST00000543770 HFM1A2PYH4 1435 aa15.05■□□□□ -0
ATP1A3-207ENST00000543770 PTPN23Q9H3S7 1636 aa15.04■□□□□ -0
ATP1A3-207ENST00000543770 NAIPQ13075 1403 aa15.04■□□□□ -0
ATP1A3-207ENST00000543770 POLA1P09884 1462 aaPredicted RBP15.04■□□□□ -0
ATP1A3-207ENST00000543770 NESP48681 1621 aa15.03■□□□□ -0
ATP1A3-207ENST00000543770 SNAPC4Q5SXM2 1469 aa15.02■□□□□ -0
ATP1A3-207ENST00000543770 NCOA2Q15596 1464 aa15.01□□□□□ -0.01
ATP1A3-207ENST00000543770 TDRD9Q8NDG6 1382 aaKnown RBP15.01□□□□□ -0.01
ATP1A3-207ENST00000543770 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.01□□□□□ -0.01
ATP1A3-207ENST00000543770 KDM5BQ9UGL1 1544 aa15.01□□□□□ -0.01
ATP1A3-207ENST00000543770 FAM9BQ8IZU0 186 aa15.01□□□□□ -0.01
ATP1A3-207ENST00000543770 SENP3-EIF4A1A0A087X0R7 540 aa15□□□□□ -0.01
ATP1A3-207ENST00000543770 FMN1Q68DA7 1419 aa15□□□□□ -0.01
ATP1A3-207ENST00000543770 CC2D2AQ9P2K1 1620 aa15□□□□□ -0.01
ATP1A3-207ENST00000543770 EFCAB5A4FU69 1503 aa15□□□□□ -0.01
ATP1A3-207ENST00000543770 C11orf95C9JLR9 678 aaPredicted RBP14.99□□□□□ -0.01
ATP1A3-207ENST00000543770 DNAJC5BQ9UF47 199 aa14.99□□□□□ -0.01
ATP1A3-207ENST00000543770 TOPBP1Q92547 1522 aa14.99□□□□□ -0.01
ATP1A3-207ENST00000543770 ABCA10Q8WWZ4 1543 aa14.99□□□□□ -0.01
ATP1A3-207ENST00000543770 MYOM3Q5VTT5 1437 aa14.98□□□□□ -0.01
ATP1A3-207ENST00000543770 LRRIQ1Q96JM4 1722 aa14.98□□□□□ -0.01
ATP1A3-207ENST00000543770 CDK11AQ9UQ88 783 aaPredicted RBP14.98□□□□□ -0.01
ATP1A3-207ENST00000543770 B4GALNT3Q6L9W6 998 aa14.95□□□□□ -0.02
ATP1A3-207ENST00000543770 CTTNBP2Q8WZ74 1663 aa14.95□□□□□ -0.02
ATP1A3-207ENST00000543770 DNMBPQ6XZF7 1577 aa14.95□□□□□ -0.02
ATP1A3-207ENST00000543770 DENND4BO75064 1496 aaPredicted RBP14.94□□□□□ -0.02
ATP1A3-207ENST00000543770 L3MBTL2Q969R5 705 aa14.94□□□□□ -0.02
ATP1A3-207ENST00000543770 EIF4G2P78344 907 aaKnown RBP eCLIP14.94□□□□□ -0.02
ATP1A3-207ENST00000543770 KDM6BO15054 1643 aa14.93□□□□□ -0.02
ATP1A3-207ENST00000543770 MAGI3Q5TCQ9 1506 aa14.93□□□□□ -0.02
ATP1A3-207ENST00000543770 MRS2Q9HD23 443 aa14.92□□□□□ -0.02
ATP1A3-207ENST00000543770 GRIN2BQ13224 1484 aa14.9□□□□□ -0.02
ATP1A3-207ENST00000543770 MPHOSPH9Q99550 1183 aa14.9□□□□□ -0.02
ATP1A3-207ENST00000543770 CUL7Q14999 1698 aa14.9□□□□□ -0.02
ATP1A3-207ENST00000543770 POLR3GLQ9BT43 218 aa14.89□□□□□ -0.03
ATP1A3-207ENST00000543770 PRKRIP1Q9H875 184 aaPredicted RBP14.89□□□□□ -0.03
ATP1A3-207ENST00000543770 NBPF8Q3BBV2 869 aa14.88□□□□□ -0.03
ATP1A3-207ENST00000543770 CNTLNQ9NXG0 1405 aa14.88□□□□□ -0.03
ATP1A3-207ENST00000543770 SUPT6HQ7KZ85 1726 aaKnown RBP14.87□□□□□ -0.03
ATP1A3-207ENST00000543770 FANCIQ9NVI1 1328 aa14.87□□□□□ -0.03
ATP1A3-207ENST00000543770 URB2Q14146 1524 aaKnown RBP14.86□□□□□ -0.03
ATP1A3-207ENST00000543770 PPP4R2Q9NY27 417 aa14.86□□□□□ -0.03
ATP1A3-207ENST00000543770 SAMD9Q5K651 1589 aa14.85□□□□□ -0.03
ATP1A3-207ENST00000543770 UGGT2Q9NYU1 1516 aa14.85□□□□□ -0.03
ATP1A3-207ENST00000543770 CCDC7Q96M83 1385 aa14.85□□□□□ -0.03
ATP1A3-207ENST00000543770 EHBP1L1Q8N3D4 1523 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms