RNA–Protein interactions for RNA: ENST00000543770.5

ATP1A3-207, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 2 BASIC

Gene ATP1A3, Length 3,427 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-207ENST00000543770 NISCHQ9Y2I1 1504 aa21.43■■□□□ 1.02
ATP1A3-207ENST00000543770 SHROOM4Q9ULL8 1493 aa18.95■□□□□ 0.62
ATP1A3-207ENST00000543770 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
ATP1A3-207ENST00000543770 MYO15BQ96JP2 1530 aa18.21■□□□□ 0.51
ATP1A3-207ENST00000543770 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
ATP1A3-207ENST00000543770 ZCCHC6Q5VYS8 1495 aaKnown RBP18.16■□□□□ 0.5
ATP1A3-207ENST00000543770 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
ATP1A3-207ENST00000543770 HRCP23327 699 aa18.05■□□□□ 0.48
ATP1A3-207ENST00000543770 PCGF6Q9BYE7 350 aa18.02■□□□□ 0.48
ATP1A3-207ENST00000543770 PPARGC1BQ86YN6 1023 aaKnown RBP17.92■□□□□ 0.46
ATP1A3-207ENST00000543770 CCDC180Q9P1Z9 1646 aa17.87■□□□□ 0.45
ATP1A3-207ENST00000543770 LOC105371045A0A1W2PR82 267 aa17.79■□□□□ 0.44
ATP1A3-207ENST00000543770 DCAF1Q9Y4B6 1507 aa17.51■□□□□ 0.39
ATP1A3-207ENST00000543770 TRIM26Q12899 539 aaPredicted RBP17.39■□□□□ 0.37
ATP1A3-207ENST00000543770 EHMT2Q96KQ7 1210 aa17.38■□□□□ 0.37
ATP1A3-207ENST00000543770 FAM9AQ8IZU1 332 aaPredicted RBP17.34■□□□□ 0.37
ATP1A3-207ENST00000543770 TRIM41Q8WV44 630 aa17.22■□□□□ 0.35
ATP1A3-207ENST00000543770 ABCC9O60706 1549 aa17.2■□□□□ 0.34
ATP1A3-207ENST00000543770 SCRIBQ14160 1630 aa17.17■□□□□ 0.34
ATP1A3-207ENST00000543770 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
ATP1A3-207ENST00000543770 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
ATP1A3-207ENST00000543770 RB1CC1Q8TDY2 1594 aa17.1■□□□□ 0.33
ATP1A3-207ENST00000543770 ZEB1P37275 1124 aaPredicted RBP16.99■□□□□ 0.31
ATP1A3-207ENST00000543770 MYT1Q01538 1121 aa16.99■□□□□ 0.31
ATP1A3-207ENST00000543770 SCAF1Q9H7N4 1312 aaKnown RBP16.94■□□□□ 0.3
ATP1A3-207ENST00000543770 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
ATP1A3-207ENST00000543770 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.86■□□□□ 0.29
ATP1A3-207ENST00000543770 TTBK1Q5TCY1 1321 aaPredicted RBP16.86■□□□□ 0.29
ATP1A3-207ENST00000543770 MROH2BQ7Z745 1585 aa16.8■□□□□ 0.28
ATP1A3-207ENST00000543770 CCER1Q8TC90 406 aaPredicted RBP16.75■□□□□ 0.27
ATP1A3-207ENST00000543770 WIZO95785 1651 aa16.73■□□□□ 0.27
ATP1A3-207ENST00000543770 NEUROD1Q13562 356 aa16.64■□□□□ 0.25
ATP1A3-207ENST00000543770 SLC24A1O60721 1099 aa16.6■□□□□ 0.25
ATP1A3-207ENST00000543770 ACIN1Q9UKV3 1341 aaKnown RBP16.57■□□□□ 0.24
ATP1A3-207ENST00000543770 ABCC8Q09428 1581 aa16.56■□□□□ 0.24
ATP1A3-207ENST00000543770 DIEXFQ68CQ4 756 aaKnown RBP16.54■□□□□ 0.24
ATP1A3-207ENST00000543770 CCDC88BA6NC98 1476 aa16.52■□□□□ 0.24
ATP1A3-207ENST00000543770 NACADO15069 1562 aa16.52■□□□□ 0.24
ATP1A3-207ENST00000543770 GTF3C3Q9Y5Q9 886 aa16.49■□□□□ 0.23
ATP1A3-207ENST00000543770 BAZ1AQ9NRL2 1556 aaPredicted RBP16.49■□□□□ 0.23
ATP1A3-207ENST00000543770 EIF4G1Q04637 1599 aaKnown RBP16.48■□□□□ 0.23
ATP1A3-207ENST00000543770 SOGA1O94964 1423 aa16.46■□□□□ 0.23
ATP1A3-207ENST00000543770 PRKCSHP14314 528 aaPredicted RBP16.45■□□□□ 0.22
ATP1A3-207ENST00000543770 CEP162Q5TB80 1403 aa16.45■□□□□ 0.22
ATP1A3-207ENST00000543770 UBTFP17480 764 aaKnown RBP16.42■□□□□ 0.22
ATP1A3-207ENST00000543770 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
ATP1A3-207ENST00000543770 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.22
ATP1A3-207ENST00000543770 CENPBP07199 599 aaPredicted RBP16.36■□□□□ 0.21
ATP1A3-207ENST00000543770 WRNQ14191 1432 aaPredicted RBP eCLIP16.34■□□□□ 0.21
ATP1A3-207ENST00000543770 TOP2AP11388 1531 aaKnown RBP16.32■□□□□ 0.2
ATP1A3-207ENST00000543770 HNRNPUL2Q1KMD3 747 aaKnown RBP16.32■□□□□ 0.2
ATP1A3-207ENST00000543770 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
ATP1A3-207ENST00000543770 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
ATP1A3-207ENST00000543770 TNIKQ9UKE5 1360 aa16.29■□□□□ 0.2
ATP1A3-207ENST00000543770 RANGAP1P46060 587 aaPredicted RBP16.28■□□□□ 0.2
ATP1A3-207ENST00000543770 ZNF316A6NFI3 1004 aaPredicted RBP16.27■□□□□ 0.2
ATP1A3-207ENST00000543770 SMARCA4P51532 1647 aa16.26■□□□□ 0.19
ATP1A3-207ENST00000543770 PABPN1Q86U42 306 aaKnown RBP eCLIP16.22■□□□□ 0.19
ATP1A3-207ENST00000543770 MIER1Q8N108 512 aa16.21■□□□□ 0.19
ATP1A3-207ENST00000543770 GOLGA3Q08378 1498 aa16.16■□□□□ 0.18
ATP1A3-207ENST00000543770 EEA1Q15075 1411 aa16.1■□□□□ 0.17
ATP1A3-207ENST00000543770 ERICH6Q7L0X2 663 aa16.09■□□□□ 0.17
ATP1A3-207ENST00000543770 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
ATP1A3-207ENST00000543770 CLIP1P30622 1438 aa16.07■□□□□ 0.16
ATP1A3-207ENST00000543770 SYNJ1O43426 1573 aa16.05■□□□□ 0.16
ATP1A3-207ENST00000543770 APLP2Q06481 763 aa16.02■□□□□ 0.16
ATP1A3-207ENST00000543770 CEP164Q9UPV0 1460 aa16.01■□□□□ 0.15
ATP1A3-207ENST00000543770 RAPGEF2Q9Y4G8 1499 aa16■□□□□ 0.15
ATP1A3-207ENST00000543770 VPS8Q8N3P4 1428 aa15.97■□□□□ 0.15
ATP1A3-207ENST00000543770 KIF21BO75037 1637 aa15.92■□□□□ 0.14
ATP1A3-207ENST00000543770 BICRAQ9NZM4 1560 aa15.89■□□□□ 0.13
ATP1A3-207ENST00000543770 KANK4Q5T7N3 995 aaPredicted RBP15.88■□□□□ 0.13
ATP1A3-207ENST00000543770 ITGAEP38570 1179 aa15.84■□□□□ 0.13
ATP1A3-207ENST00000543770 DHX57Q6P158 1386 aaKnown RBP15.83■□□□□ 0.13
ATP1A3-207ENST00000543770 BAZ1BQ9UIG0 1483 aaKnown RBP15.81■□□□□ 0.12
ATP1A3-207ENST00000543770 ATAD2BQ9ULI0 1458 aa15.81■□□□□ 0.12
ATP1A3-207ENST00000543770 PEG3Q9GZU2 1588 aa15.78■□□□□ 0.12
ATP1A3-207ENST00000543770 ARAP1Q96P48 1450 aa15.75■□□□□ 0.11
ATP1A3-207ENST00000543770 SUPT16HQ9Y5B9 1047 aaKnown RBP15.75■□□□□ 0.11
ATP1A3-207ENST00000543770 KCNH8Q96L42 1107 aa15.75■□□□□ 0.11
ATP1A3-207ENST00000543770 BCL11AQ9H165 835 aa15.72■□□□□ 0.11
ATP1A3-207ENST00000543770 TOP2BQ02880 1626 aa15.7■□□□□ 0.1
ATP1A3-207ENST00000543770 PRXQ9BXM0 1461 aa15.66■□□□□ 0.1
ATP1A3-207ENST00000543770 CLSPNQ9HAW4 1339 aa15.65■□□□□ 0.1
ATP1A3-207ENST00000543770 BCANQ96GW7 911 aa15.64■□□□□ 0.09
ATP1A3-207ENST00000543770 CCNB3Q8WWL7 1395 aa15.61■□□□□ 0.09
ATP1A3-207ENST00000543770 RRBP1Q9P2E9 1410 aaKnown RBP15.6■□□□□ 0.09
ATP1A3-207ENST00000543770 ERICH3Q5RHP9 1530 aa15.59■□□□□ 0.09
ATP1A3-207ENST00000543770 CUX1P39880 1505 aa15.59■□□□□ 0.09
ATP1A3-207ENST00000543770 HIRIP3Q9BW71 556 aaPredicted RBP15.58■□□□□ 0.09
ATP1A3-207ENST00000543770 BIVM-ERCC5R4GMW8 1640 aa15.58■□□□□ 0.08
ATP1A3-207ENST00000543770 TSHZ2Q9NRE2 1034 aa15.58■□□□□ 0.08
ATP1A3-207ENST00000543770 ARHGAP35Q9NRY4 1499 aa15.57■□□□□ 0.08
ATP1A3-207ENST00000543770 RAB3GAP2Q9H2M9 1393 aa15.57■□□□□ 0.08
ATP1A3-207ENST00000543770 SIN3AQ96ST3 1273 aa15.56■□□□□ 0.08
ATP1A3-207ENST00000543770 DDX10Q13206 875 aaKnown RBP15.55■□□□□ 0.08
ATP1A3-207ENST00000543770 KIF27Q86VH2 1401 aa15.55■□□□□ 0.08
ATP1A3-207ENST00000543770 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
ATP1A3-207ENST00000543770 ATP1B4Q9UN42 357 aaPredicted RBP15.53■□□□□ 0.08
ATP1A3-207ENST00000543770 P3H3Q8IVL6 736 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms