RNA–Protein interactions for RNA: ENST00000542611.5

NBR1-202, Transcript of NBR1, autophagy cargo receptor, humanhuman

TSL 2 BASIC

Gene NBR1, Length 2,703 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBR1-202ENST00000542611 ABCA5Q8WWZ7 1642 aa17.97■□□□□ 0.47
NBR1-202ENST00000542611 ARAP1Q96P48 1450 aa17.97■□□□□ 0.47
NBR1-202ENST00000542611 CCER1Q8TC90 406 aaPredicted RBP17.96■□□□□ 0.47
NBR1-202ENST00000542611 TARBP1Q13395 1621 aaKnown RBP17.96■□□□□ 0.46
NBR1-202ENST00000542611 CUL7Q14999 1698 aa17.95■□□□□ 0.46
NBR1-202ENST00000542611 GAPVD1Q14C86 1478 aa17.93■□□□□ 0.46
NBR1-202ENST00000542611 ARHGAP35Q9NRY4 1499 aa17.92■□□□□ 0.46
NBR1-202ENST00000542611 ERCC6Q03468 1493 aa17.89■□□□□ 0.45
NBR1-202ENST00000542611 WDR62O43379 1518 aa17.88■□□□□ 0.45
NBR1-202ENST00000542611 TSHZ2Q9NRE2 1034 aa17.85■□□□□ 0.45
NBR1-202ENST00000542611 APLP2Q06481 763 aa17.85■□□□□ 0.45
NBR1-202ENST00000542611 PBRM1Q86U86 1689 aa17.84■□□□□ 0.45
NBR1-202ENST00000542611 CTTNBP2Q8WZ74 1663 aa17.84■□□□□ 0.45
NBR1-202ENST00000542611 AQRO60306 1485 aaKnown RBP eCLIP17.83■□□□□ 0.444e-7■■■■□ 23.7
NBR1-202ENST00000542611 ERICH6Q7L0X2 663 aa17.83■□□□□ 0.44
NBR1-202ENST00000542611 THOC2Q8NI27 1593 aaKnown RBP17.81■□□□□ 0.44
NBR1-202ENST00000542611 ZNF316A6NFI3 1004 aaPredicted RBP17.8■□□□□ 0.44
NBR1-202ENST00000542611 ZNF608Q9ULD9 1512 aaPredicted RBP17.79■□□□□ 0.44
NBR1-202ENST00000542611 IFT140Q96RY7 1462 aa17.77■□□□□ 0.44
NBR1-202ENST00000542611 CLSPNQ9HAW4 1339 aa17.77■□□□□ 0.43
NBR1-202ENST00000542611 SUPT16HQ9Y5B9 1047 aaKnown RBP17.77■□□□□ 0.43
NBR1-202ENST00000542611 P3H3Q8IVL6 736 aa17.76■□□□□ 0.43
NBR1-202ENST00000542611 MIER1Q8N108 512 aa17.75■□□□□ 0.43
NBR1-202ENST00000542611 ADAMTS12P58397 1594 aa17.73■□□□□ 0.43
NBR1-202ENST00000542611 KANK4Q5T7N3 995 aaPredicted RBP17.72■□□□□ 0.43
NBR1-202ENST00000542611 FHOD3Q2V2M9 1422 aa17.72■□□□□ 0.43
NBR1-202ENST00000542611 GRIN2BQ13224 1484 aa17.71■□□□□ 0.43
NBR1-202ENST00000542611 EIF4G3O43432 1585 aaKnown RBP17.71■□□□□ 0.43
NBR1-202ENST00000542611 EFCAB5A4FU69 1503 aa17.7■□□□□ 0.42
NBR1-202ENST00000542611 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
NBR1-202ENST00000542611 PCF11O94913 1555 aaKnown RBP17.68■□□□□ 0.42
NBR1-202ENST00000542611 SNAPC4Q5SXM2 1469 aa17.64■□□□□ 0.41
NBR1-202ENST00000542611 TIAM1Q13009 1591 aa17.64■□□□□ 0.41
NBR1-202ENST00000542611 SAMD9Q5K651 1589 aa17.63■□□□□ 0.41
NBR1-202ENST00000542611 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
NBR1-202ENST00000542611 HNRNPUL2Q1KMD3 747 aaKnown RBP17.61■□□□□ 0.41
NBR1-202ENST00000542611 IQGAP2Q13576 1575 aa17.59■□□□□ 0.41
NBR1-202ENST00000542611 CFAP43Q8NDM7 1665 aa17.58■□□□□ 0.41
NBR1-202ENST00000542611 FYCO1Q9BQS8 1478 aa17.57■□□□□ 0.4
NBR1-202ENST00000542611 MAP3K1Q13233 1512 aa17.56■□□□□ 0.4
NBR1-202ENST00000542611 FMN1Q68DA7 1419 aa17.55■□□□□ 0.4
NBR1-202ENST00000542611 CASKIN1Q8WXD9 1431 aa17.55■□□□□ 0.4
NBR1-202ENST00000542611 LRRC9Q6ZRR7 1453 aa17.54■□□□□ 0.4
NBR1-202ENST00000542611 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
NBR1-202ENST00000542611 MAGI1Q96QZ7 1491 aaPredicted RBP17.52■□□□□ 0.4
NBR1-202ENST00000542611 LRRIQ1Q96JM4 1722 aa17.51■□□□□ 0.39
NBR1-202ENST00000542611 RRBP1Q9P2E9 1410 aaKnown RBP17.5■□□□□ 0.39
NBR1-202ENST00000542611 FBLN2P98095 1184 aa17.48■□□□□ 0.39
NBR1-202ENST00000542611 SYNJ2O15056 1496 aa17.48■□□□□ 0.39
NBR1-202ENST00000542611 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
NBR1-202ENST00000542611 KIAA0586Q9BVV6 1533 aa17.46■□□□□ 0.39
NBR1-202ENST00000542611 CEP170Q5SW79 1584 aa17.46■□□□□ 0.39
NBR1-202ENST00000542611 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
NBR1-202ENST00000542611 CCNB3Q8WWL7 1395 aa17.45■□□□□ 0.38
NBR1-202ENST00000542611 PHLDB1Q86UU1 1377 aa17.45■□□□□ 0.38
NBR1-202ENST00000542611 KIAA0556O60303 1618 aa17.42■□□□□ 0.38
NBR1-202ENST00000542611 DISP1Q96F81 1524 aa17.4■□□□□ 0.38
NBR1-202ENST00000542611 ITGAEP38570 1179 aa17.4■□□□□ 0.38
NBR1-202ENST00000542611 MTUS2Q5JR59 1369 aa17.38■□□□□ 0.37
NBR1-202ENST00000542611 HECW1Q76N89 1606 aa17.38■□□□□ 0.37
NBR1-202ENST00000542611 RBM19Q9Y4C8 960 aaKnown RBP17.36■□□□□ 0.37
NBR1-202ENST00000542611 NUP160Q12769 1436 aa17.36■□□□□ 0.37
NBR1-202ENST00000542611 ARID3CA6NKF2 412 aa17.34■□□□□ 0.37
NBR1-202ENST00000542611 MAGI3Q5TCQ9 1506 aa17.33■□□□□ 0.37
NBR1-202ENST00000542611 CDK13Q14004 1512 aaKnown RBP17.33■□□□□ 0.36
NBR1-202ENST00000542611 FAM50AQ14320 339 aaKnown RBP17.33■□□□□ 0.36
NBR1-202ENST00000542611 CCDC18Q5T9S5 1454 aa17.32■□□□□ 0.36
NBR1-202ENST00000542611 EPRSP07814 1512 aaKnown RBP17.32■□□□□ 0.36
NBR1-202ENST00000542611 EHBP1L1Q8N3D4 1523 aa17.31■□□□□ 0.36
NBR1-202ENST00000542611 CHD1O14646 1710 aa17.3■□□□□ 0.36
NBR1-202ENST00000542611 ANO8Q9HCE9 1232 aaPredicted RBP17.3■□□□□ 0.36
NBR1-202ENST00000542611 SUPT6HQ7KZ85 1726 aaKnown RBP17.3■□□□□ 0.36
NBR1-202ENST00000542611 NCOA2Q15596 1464 aa17.29■□□□□ 0.36
NBR1-202ENST00000542611 MSH5O43196 834 aa17.28■□□□□ 0.36
NBR1-202ENST00000542611 JPH4Q96JJ6 628 aa17.27■□□□□ 0.36
NBR1-202ENST00000542611 RAPGEF6Q8TEU7 1601 aa17.27■□□□□ 0.36
NBR1-202ENST00000542611 FGD6Q6ZV73 1430 aa17.26■□□□□ 0.35
NBR1-202ENST00000542611 NUP153P49790 1475 aaKnown RBP17.25■□□□□ 0.35
NBR1-202ENST00000542611 CARMIL2Q6F5E8 1435 aa17.23■□□□□ 0.35
NBR1-202ENST00000542611 PLB1Q6P1J6 1458 aa17.23■□□□□ 0.35
NBR1-202ENST00000542611 BCANQ96GW7 911 aa17.23■□□□□ 0.35
NBR1-202ENST00000542611 MYOM3Q5VTT5 1437 aa17.22■□□□□ 0.35
NBR1-202ENST00000542611 DHX57Q6P158 1386 aaKnown RBP17.22■□□□□ 0.35
NBR1-202ENST00000542611 ARHGEF11O15085 1522 aa17.21■□□□□ 0.35
NBR1-202ENST00000542611 RAB3GAP2Q9H2M9 1393 aa17.2■□□□□ 0.34
NBR1-202ENST00000542611 MYT1LQ9UL68 1186 aa17.18■□□□□ 0.34
NBR1-202ENST00000542611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.17■□□□□ 0.34
NBR1-202ENST00000542611 PTPN23Q9H3S7 1636 aa17.17■□□□□ 0.34
NBR1-202ENST00000542611 PRG4Q92954 1404 aaPredicted RBP17.16■□□□□ 0.34
NBR1-202ENST00000542611 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
NBR1-202ENST00000542611 FKBP8Q14318 412 aa17.13■□□□□ 0.33
NBR1-202ENST00000542611 DEKP35659 375 aaKnown RBP17.12■□□□□ 0.33
NBR1-202ENST00000542611 PTPRKQ15262 1439 aa17.12■□□□□ 0.33
NBR1-202ENST00000542611 ABCA8O94911 1581 aa17.11■□□□□ 0.33
NBR1-202ENST00000542611 FANCIQ9NVI1 1328 aa17.1■□□□□ 0.33
NBR1-202ENST00000542611 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
NBR1-202ENST00000542611 CDK11AQ9UQ88 783 aaPredicted RBP17.08■□□□□ 0.32
NBR1-202ENST00000542611 ERCC6L2Q5T890 1561 aa17.07■□□□□ 0.32
NBR1-202ENST00000542611 TCOF1Q13428 1488 aaKnown RBP17.07■□□□□ 0.32
NBR1-202ENST00000542611 SALL2Q9Y467 1007 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms