RNA–Protein interactions for RNA: ENST00000542107.5

CX3CR1-206, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-206ENST00000542107 NESP48681 1621 aa14.55□□□□□ -0.08
CX3CR1-206ENST00000542107 PHLDB1Q86UU1 1377 aa14.55□□□□□ -0.08
CX3CR1-206ENST00000542107 FHOD3Q2V2M9 1422 aa14.54□□□□□ -0.08
CX3CR1-206ENST00000542107 HIRIP3Q9BW71 556 aaPredicted RBP14.51□□□□□ -0.09
CX3CR1-206ENST00000542107 LRRC9Q6ZRR7 1453 aa14.5□□□□□ -0.09
CX3CR1-206ENST00000542107 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
CX3CR1-206ENST00000542107 TIAM1Q13009 1591 aa14.49□□□□□ -0.09
CX3CR1-206ENST00000542107 SETD5Q9C0A6 1442 aa14.49□□□□□ -0.09
CX3CR1-206ENST00000542107 TDRD9Q8NDG6 1382 aaKnown RBP14.48□□□□□ -0.09
CX3CR1-206ENST00000542107 FHAD1B1AJZ9 1412 aa14.48□□□□□ -0.09
CX3CR1-206ENST00000542107 KCNH8Q96L42 1107 aa14.46□□□□□ -0.09
CX3CR1-206ENST00000542107 POLA1P09884 1462 aaPredicted RBP14.46□□□□□ -0.09
CX3CR1-206ENST00000542107 DDX10Q13206 875 aaKnown RBP14.45□□□□□ -0.1
CX3CR1-206ENST00000542107 TOPBP1Q92547 1522 aa14.44□□□□□ -0.1
CX3CR1-206ENST00000542107 ARID3CA6NKF2 412 aa14.43□□□□□ -0.1
CX3CR1-206ENST00000542107 PRDM2Q13029 1718 aa14.42□□□□□ -0.1
CX3CR1-206ENST00000542107 PCF11O94913 1555 aaKnown RBP14.41□□□□□ -0.1
CX3CR1-206ENST00000542107 MTUS2Q5JR59 1369 aa14.4□□□□□ -0.1
CX3CR1-206ENST00000542107 MAPKBP1O60336 1514 aa14.39□□□□□ -0.11
CX3CR1-206ENST00000542107 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
CX3CR1-206ENST00000542107 ABCA10Q8WWZ4 1543 aa14.39□□□□□ -0.11
CX3CR1-206ENST00000542107 MAP3K1Q13233 1512 aa14.37□□□□□ -0.11
CX3CR1-206ENST00000542107 CHIC2Q9UKJ5 165 aa14.36□□□□□ -0.11
CX3CR1-206ENST00000542107 CASKIN1Q8WXD9 1431 aa14.34□□□□□ -0.11
CX3CR1-206ENST00000542107 URB2Q14146 1524 aaKnown RBP14.33□□□□□ -0.12
CX3CR1-206ENST00000542107 WDR97A6NE52 1622 aa14.32□□□□□ -0.12
CX3CR1-206ENST00000542107 FMN1Q68DA7 1419 aa14.32□□□□□ -0.12
CX3CR1-206ENST00000542107 RRP7BPQ9NSQ0 103 aa14.32□□□□□ -0.12
CX3CR1-206ENST00000542107 FYCO1Q9BQS8 1478 aa14.31□□□□□ -0.12
CX3CR1-206ENST00000542107 PPP1R15AO75807 674 aaPredicted RBP14.31□□□□□ -0.12
CX3CR1-206ENST00000542107 SUPT16HQ9Y5B9 1047 aaKnown RBP14.31□□□□□ -0.12
CX3CR1-206ENST00000542107 GAPVD1Q14C86 1478 aa14.3□□□□□ -0.12
CX3CR1-206ENST00000542107 TONSLQ96HA7 1378 aa14.29□□□□□ -0.12
CX3CR1-206ENST00000542107 FGD6Q6ZV73 1430 aa14.29□□□□□ -0.12
CX3CR1-206ENST00000542107 TRIM52Q96A61 297 aa14.28□□□□□ -0.12
CX3CR1-206ENST00000542107 BCANQ96GW7 911 aa14.28□□□□□ -0.12
CX3CR1-206ENST00000542107 EFCAB5A4FU69 1503 aa14.27□□□□□ -0.13
CX3CR1-206ENST00000542107 PTPRKQ15262 1439 aa14.26□□□□□ -0.13
CX3CR1-206ENST00000542107 PDS5BQ9NTI5 1447 aa14.26□□□□□ -0.13
CX3CR1-206ENST00000542107 CFAP43Q8NDM7 1665 aa14.26□□□□□ -0.13
CX3CR1-206ENST00000542107 CUL7Q14999 1698 aa14.23□□□□□ -0.13
CX3CR1-206ENST00000542107 ANP32CO43423 234 aa14.23□□□□□ -0.13
CX3CR1-206ENST00000542107 AQRO60306 1485 aaKnown RBP eCLIP14.23□□□□□ -0.13
CX3CR1-206ENST00000542107 TIMELESSQ9UNS1 1208 aa14.22□□□□□ -0.13
CX3CR1-206ENST00000542107 CCDC18Q5T9S5 1454 aa14.22□□□□□ -0.13
CX3CR1-206ENST00000542107 NCOA2Q15596 1464 aa14.22□□□□□ -0.13
CX3CR1-206ENST00000542107 SNAPC4Q5SXM2 1469 aa14.22□□□□□ -0.13
CX3CR1-206ENST00000542107 LAMC3Q9Y6N6 1575 aa14.2□□□□□ -0.14
CX3CR1-206ENST00000542107 FOXD1Q16676 465 aa14.19□□□□□ -0.14
CX3CR1-206ENST00000542107 CTTNBP2Q8WZ74 1663 aa14.19□□□□□ -0.14
CX3CR1-206ENST00000542107 MYOM3Q5VTT5 1437 aa14.18□□□□□ -0.14
CX3CR1-206ENST00000542107 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.18□□□□□ -0.14
CX3CR1-206ENST00000542107 FKBP8Q14318 412 aa14.17□□□□□ -0.14
CX3CR1-206ENST00000542107 NAIPQ13075 1403 aa14.16□□□□□ -0.14
CX3CR1-206ENST00000542107 HFM1A2PYH4 1435 aa14.16□□□□□ -0.14
CX3CR1-206ENST00000542107 UACAQ9BZF9 1416 aa14.15□□□□□ -0.14
CX3CR1-206ENST00000542107 GRIN2BQ13224 1484 aa14.14□□□□□ -0.15
CX3CR1-206ENST00000542107 ABCA5Q8WWZ7 1642 aa14.13□□□□□ -0.15
CX3CR1-206ENST00000542107 FBLN2P98095 1184 aa14.13□□□□□ -0.15
CX3CR1-206ENST00000542107 KIF21AQ7Z4S6 1674 aa14.1□□□□□ -0.15
CX3CR1-206ENST00000542107 SAMD9Q5K651 1589 aa14.1□□□□□ -0.15
CX3CR1-206ENST00000542107 PTPN23Q9H3S7 1636 aa14.1□□□□□ -0.15
CX3CR1-206ENST00000542107 MAGI3Q5TCQ9 1506 aa14.1□□□□□ -0.15
CX3CR1-206ENST00000542107 ZNF644Q9H582 1327 aaPredicted RBP14.09□□□□□ -0.15
CX3CR1-206ENST00000542107 MPHOSPH9Q99550 1183 aa14.09□□□□□ -0.15
CX3CR1-206ENST00000542107 CDK13Q14004 1512 aaKnown RBP14.09□□□□□ -0.15
CX3CR1-206ENST00000542107 HSPA5P11021 654 aaKnown RBP14.09□□□□□ -0.15
CX3CR1-206ENST00000542107 NEFLP07196 543 aa14.09□□□□□ -0.15
CX3CR1-206ENST00000542107 CNGB1Q14028 1251 aaPredicted RBP14.09□□□□□ -0.15
CX3CR1-206ENST00000542107 ZNF777Q9ULD5 760 aaPredicted RBP14.08□□□□□ -0.16
CX3CR1-206ENST00000542107 LRRIQ1Q96JM4 1722 aa14.08□□□□□ -0.16
CX3CR1-206ENST00000542107 CCER2I3L3R5 266 aa14.07□□□□□ -0.16
CX3CR1-206ENST00000542107 EHBP1L1Q8N3D4 1523 aa14.07□□□□□ -0.16
CX3CR1-206ENST00000542107 SUPT6HQ7KZ85 1726 aaKnown RBP14.07□□□□□ -0.16
CX3CR1-206ENST00000542107 L3MBTL2Q969R5 705 aa14.07□□□□□ -0.16
CX3CR1-206ENST00000542107 EPRSP07814 1512 aaKnown RBP14.05□□□□□ -0.16
CX3CR1-206ENST00000542107 TSHZ2Q9NRE2 1034 aa14.05□□□□□ -0.16
CX3CR1-206ENST00000542107 HNRNPUQ00839 825 aaKnown RBP eCLIP14.05□□□□□ -0.16
CX3CR1-206ENST00000542107 UGGT2Q9NYU1 1516 aa14.04□□□□□ -0.16
CX3CR1-206ENST00000542107 ZNF608Q9ULD9 1512 aaPredicted RBP14.04□□□□□ -0.16
CX3CR1-206ENST00000542107 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
CX3CR1-206ENST00000542107 EIF4G2P78344 907 aaKnown RBP eCLIP14.03□□□□□ -0.16
CX3CR1-206ENST00000542107 SLC4A1APQ9BWU0 796 aaKnown RBP14.03□□□□□ -0.16
CX3CR1-206ENST00000542107 WASHC2AQ641Q2 1341 aa14.02□□□□□ -0.16
CX3CR1-206ENST00000542107 POLR3GLQ9BT43 218 aa14.02□□□□□ -0.17
CX3CR1-206ENST00000542107 IQGAP2Q13576 1575 aa14.02□□□□□ -0.17
CX3CR1-206ENST00000542107 ZNF326Q5BKZ1 582 aaKnown RBP14.02□□□□□ -0.17
CX3CR1-206ENST00000542107 CHMP7Q8WUX9 453 aaPredicted RBP14.02□□□□□ -0.17
CX3CR1-206ENST00000542107 IRX6P78412 446 aaPredicted RBP14.01□□□□□ -0.17
CX3CR1-206ENST00000542107 CDK11AQ9UQ88 783 aaPredicted RBP14□□□□□ -0.17
CX3CR1-206ENST00000542107 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
CX3CR1-206ENST00000542107 MRC2Q9UBG0 1479 aa13.99□□□□□ -0.17
CX3CR1-206ENST00000542107 HECW1Q76N89 1606 aa13.99□□□□□ -0.17
CX3CR1-206ENST00000542107 KDM6BO15054 1643 aa13.98□□□□□ -0.17
CX3CR1-206ENST00000542107 C11orf95C9JLR9 678 aaPredicted RBP13.98□□□□□ -0.17
CX3CR1-206ENST00000542107 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
CX3CR1-206ENST00000542107 NBPF8Q3BBV2 869 aa13.97□□□□□ -0.17
CX3CR1-206ENST00000542107 CCDC184Q52MB2 194 aa13.97□□□□□ -0.17
CX3CR1-206ENST00000542107 FAM9BQ8IZU0 186 aa13.97□□□□□ -0.17
CX3CR1-206ENST00000542107 DENND4BO75064 1496 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms