RNA–Protein interactions for RNA: ENST00000540083.1

NECAP1-204, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-204ENST00000540083 PIP4P2Q8N4L2 257 aa12.72□□□□□ -0.37
NECAP1-204ENST00000540083 MYT1Q01538 1121 aa12.7□□□□□ -0.38
NECAP1-204ENST00000540083 PRR29P0C7W0 189 aa12.68□□□□□ -0.38
NECAP1-204ENST00000540083 STAG3Q9UJ98 1225 aa12.68□□□□□ -0.38
NECAP1-204ENST00000540083 LAMC3Q9Y6N6 1575 aa12.68□□□□□ -0.38
NECAP1-204ENST00000540083 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
NECAP1-204ENST00000540083 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
NECAP1-204ENST00000540083 PDS5BQ9NTI5 1447 aa12.63□□□□□ -0.39
NECAP1-204ENST00000540083 CFTRP13569 1480 aa12.6□□□□□ -0.39
NECAP1-204ENST00000540083 PRKAR2AP13861 404 aaKnown RBP12.58□□□□□ -0.4
NECAP1-204ENST00000540083 ERCC6Q03468 1493 aa12.58□□□□□ -0.4
NECAP1-204ENST00000540083 NESP48681 1621 aa12.55□□□□□ -0.4
NECAP1-204ENST00000540083 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
NECAP1-204ENST00000540083 PRDM2Q13029 1718 aa12.5□□□□□ -0.41
NECAP1-204ENST00000540083 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
NECAP1-204ENST00000540083 CEP164Q9UPV0 1460 aa12.48□□□□□ -0.41
NECAP1-204ENST00000540083 CREBZFQ9NS37 354 aa12.45□□□□□ -0.42
NECAP1-204ENST00000540083 ABCC8Q09428 1581 aa12.43□□□□□ -0.42
NECAP1-204ENST00000540083 MRC2Q9UBG0 1479 aa12.42□□□□□ -0.42
NECAP1-204ENST00000540083 KIF21AQ7Z4S6 1674 aa12.42□□□□□ -0.42
NECAP1-204ENST00000540083 CUX2O14529 1486 aa12.4□□□□□ -0.42
NECAP1-204ENST00000540083 FARP1Q9Y4F1 1045 aaPredicted RBP12.4□□□□□ -0.42
NECAP1-204ENST00000540083 HAX1O00165 279 aa12.39□□□□□ -0.43
NECAP1-204ENST00000540083 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
NECAP1-204ENST00000540083 WDR62O43379 1518 aa12.35□□□□□ -0.43
NECAP1-204ENST00000540083 THOC2Q8NI27 1593 aaKnown RBP12.35□□□□□ -0.43
NECAP1-204ENST00000540083 MIER1Q8N108 512 aa12.33□□□□□ -0.44
NECAP1-204ENST00000540083 DNMBPQ6XZF7 1577 aa12.3□□□□□ -0.44
NECAP1-204ENST00000540083 C19orf67A6NJJ6 358 aa12.3□□□□□ -0.44
NECAP1-204ENST00000540083 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
NECAP1-204ENST00000540083 URB2Q14146 1524 aaKnown RBP12.29□□□□□ -0.44
NECAP1-204ENST00000540083 TOPBP1Q92547 1522 aa12.29□□□□□ -0.44
NECAP1-204ENST00000540083 PLEKHG5O94827 1062 aa12.28□□□□□ -0.44
NECAP1-204ENST00000540083 WRNQ14191 1432 aaPredicted RBP eCLIP12.28□□□□□ -0.44
NECAP1-204ENST00000540083 PLCD3Q8N3E9 789 aa12.27□□□□□ -0.45
NECAP1-204ENST00000540083 EVX2Q03828 476 aa12.26□□□□□ -0.45
NECAP1-204ENST00000540083 NPM1P06748 294 aaKnown RBP eCLIP12.25□□□□□ -0.45
NECAP1-204ENST00000540083 IFT140Q96RY7 1462 aa12.23□□□□□ -0.45
NECAP1-204ENST00000540083 CUX1P39880 1505 aa12.21□□□□□ -0.45
NECAP1-204ENST00000540083 SOGA1O94964 1423 aa12.2□□□□□ -0.46
NECAP1-204ENST00000540083 TOP2BQ02880 1626 aa12.2□□□□□ -0.46
NECAP1-204ENST00000540083 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
NECAP1-204ENST00000540083 SP7Q8TDD2 431 aaPredicted RBP12.2□□□□□ -0.46
NECAP1-204ENST00000540083 TTBK1Q5TCY1 1321 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-204ENST00000540083 HRCP23327 699 aa12.19□□□□□ -0.46
NECAP1-204ENST00000540083 POLA1P09884 1462 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-204ENST00000540083 VASPP50552 380 aaPredicted RBP12.18□□□□□ -0.46
NECAP1-204ENST00000540083 FGD5Q6ZNL6 1462 aa12.18□□□□□ -0.46
NECAP1-204ENST00000540083 BIVM-ERCC5R4GMW8 1640 aa12.18□□□□□ -0.46
NECAP1-204ENST00000540083 ZBTB47Q9UFB7 747 aaPredicted RBP12.16□□□□□ -0.46
NECAP1-204ENST00000540083 WDR97A6NE52 1622 aa12.15□□□□□ -0.46
NECAP1-204ENST00000540083 TRIM41Q8WV44 630 aa12.15□□□□□ -0.46
NECAP1-204ENST00000540083 SYNJ1O43426 1573 aa12.13□□□□□ -0.47
NECAP1-204ENST00000540083 TARBP1Q13395 1621 aaKnown RBP12.11□□□□□ -0.47
NECAP1-204ENST00000540083 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
NECAP1-204ENST00000540083 ZRANB1Q9UGI0 708 aa12.1□□□□□ -0.47
NECAP1-204ENST00000540083 RAD54L2Q9Y4B4 1467 aa12.09□□□□□ -0.47
NECAP1-204ENST00000540083 PAK3O75914 559 aaPredicted RBP12.09□□□□□ -0.47
NECAP1-204ENST00000540083 TDRD9Q8NDG6 1382 aaKnown RBP12.05□□□□□ -0.48
NECAP1-204ENST00000540083 KIF27Q86VH2 1401 aa12.05□□□□□ -0.48
NECAP1-204ENST00000540083 GAPVD1Q14C86 1478 aa12.05□□□□□ -0.48
NECAP1-204ENST00000540083 GRIN2BQ13224 1484 aa12.04□□□□□ -0.48
NECAP1-204ENST00000540083 KLHL34Q8N239 644 aa12.04□□□□□ -0.48
NECAP1-204ENST00000540083 ZNF579Q8NAF0 562 aaKnown RBP12.04□□□□□ -0.48
NECAP1-204ENST00000540083 ZNF608Q9ULD9 1512 aaPredicted RBP12.04□□□□□ -0.48
NECAP1-204ENST00000540083 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.483e-7■■■■■ 34.1
NECAP1-204ENST00000540083 NUBP1P53384 320 aa12.03□□□□□ -0.48
NECAP1-204ENST00000540083 RASEFQ8IZ41 740 aa12.03□□□□□ -0.48
NECAP1-204ENST00000540083 EIF4G3O43432 1585 aaKnown RBP12.03□□□□□ -0.48
NECAP1-204ENST00000540083 IFNLR1Q8IU57 520 aaPredicted RBP12.02□□□□□ -0.49
NECAP1-204ENST00000540083 TSPYL2Q9H2G4 693 aaPredicted RBP12.02□□□□□ -0.49
NECAP1-204ENST00000540083 GABBR2O75899 941 aa12.01□□□□□ -0.49
NECAP1-204ENST00000540083 CLCN6P51797 869 aa12.01□□□□□ -0.49
NECAP1-204ENST00000540083 MAGI1Q96QZ7 1491 aaPredicted RBP12.01□□□□□ -0.49
NECAP1-204ENST00000540083 ERICH3Q5RHP9 1530 aa11.99□□□□□ -0.49
NECAP1-204ENST00000540083 ABCA5Q8WWZ7 1642 aa11.99□□□□□ -0.49
NECAP1-204ENST00000540083 EEA1Q15075 1411 aa11.97□□□□□ -0.49
NECAP1-204ENST00000540083 CHMP7Q8WUX9 453 aaPredicted RBP11.97□□□□□ -0.49
NECAP1-204ENST00000540083 CCDC61Q9Y6R9 512 aa11.96□□□□□ -0.49
NECAP1-204ENST00000540083 PBRM1Q86U86 1689 aa11.95□□□□□ -0.5
NECAP1-204ENST00000540083 PHF12Q96QT6 1004 aa11.95□□□□□ -0.5
NECAP1-204ENST00000540083 SYNJ2O15056 1496 aa11.94□□□□□ -0.5
NECAP1-204ENST00000540083 SNAPC4Q5SXM2 1469 aa11.94□□□□□ -0.5
NECAP1-204ENST00000540083 FHAD1B1AJZ9 1412 aa11.94□□□□□ -0.5
NECAP1-204ENST00000540083 FAM212AQ96EL1 285 aa11.93□□□□□ -0.5
NECAP1-204ENST00000540083 IGF1RP08069 1367 aa11.92□□□□□ -0.5
NECAP1-204ENST00000540083 SPOCK2Q92563 424 aa11.91□□□□□ -0.5
NECAP1-204ENST00000540083 CUL7Q14999 1698 aa11.91□□□□□ -0.5
NECAP1-204ENST00000540083 DCAF8Q5TAQ9 597 aa11.89□□□□□ -0.51
NECAP1-204ENST00000540083 CARMIL1Q5VZK9 1371 aa11.89□□□□□ -0.51
NECAP1-204ENST00000540083 ADAMTS12P58397 1594 aa11.87□□□□□ -0.51
NECAP1-204ENST00000540083 KIF12Q96FN5 646 aa11.86□□□□□ -0.51
NECAP1-204ENST00000540083 GRIN2AQ12879 1464 aa11.85□□□□□ -0.51
NECAP1-204ENST00000540083 GALR2O43603 387 aaPredicted RBP11.85□□□□□ -0.51
NECAP1-204ENST00000540083 RAPGEF2Q9Y4G8 1499 aa11.83□□□□□ -0.52
NECAP1-204ENST00000540083 CHD1O14646 1710 aa11.83□□□□□ -0.52
NECAP1-204ENST00000540083 GSE1Q14687 1217 aa11.83□□□□□ -0.52
NECAP1-204ENST00000540083 RUSC2Q8N2Y8 1516 aa11.81□□□□□ -0.52
NECAP1-204ENST00000540083 MAP3K13O43283 966 aa11.81□□□□□ -0.52
NECAP1-204ENST00000540083 DNAJC5Q9H3Z4 198 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms