RNA–Protein interactions for RNA: ENST00000540079.6

KIFC3-205, Transcript of kinesin family member C3, humanhuman

TSL 2 BASIC

Gene KIFC3, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-205ENST00000540079 P3H3Q8IVL6 736 aa22.8■■□□□ 1.24
KIFC3-205ENST00000540079 POLA1P09884 1462 aaPredicted RBP22.8■■□□□ 1.24
KIFC3-205ENST00000540079 DNMBPQ6XZF7 1577 aa22.77■■□□□ 1.24
KIFC3-205ENST00000540079 ARHGAP35Q9NRY4 1499 aa22.74■■□□□ 1.23
KIFC3-205ENST00000540079 ATP1B4Q9UN42 357 aaPredicted RBP22.72■■□□□ 1.23
KIFC3-205ENST00000540079 LAMC3Q9Y6N6 1575 aa22.72■■□□□ 1.23
KIFC3-205ENST00000540079 TDRD9Q8NDG6 1382 aaKnown RBP22.72■■□□□ 1.23
KIFC3-205ENST00000540079 URB2Q14146 1524 aaKnown RBP22.71■■□□□ 1.23
KIFC3-205ENST00000540079 PDS5BQ9NTI5 1447 aa22.7■■□□□ 1.23
KIFC3-205ENST00000540079 KCNH8Q96L42 1107 aa22.7■■□□□ 1.22
KIFC3-205ENST00000540079 ABCA10Q8WWZ4 1543 aa22.66■■□□□ 1.22
KIFC3-205ENST00000540079 DHX57Q6P158 1386 aaKnown RBP22.61■■□□□ 1.21
KIFC3-205ENST00000540079 ITGAEP38570 1179 aa22.61■■□□□ 1.21
KIFC3-205ENST00000540079 KIF21AQ7Z4S6 1674 aa22.56■■□□□ 1.2
KIFC3-205ENST00000540079 RRBP1Q9P2E9 1410 aaKnown RBP22.54■■□□□ 1.2
KIFC3-205ENST00000540079 FKBP8Q14318 412 aa22.51■■□□□ 1.19
KIFC3-205ENST00000540079 FHOD3Q2V2M9 1422 aa22.5■■□□□ 1.19
KIFC3-205ENST00000540079 GAPVD1Q14C86 1478 aa22.5■■□□□ 1.19
KIFC3-205ENST00000540079 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.185e-7■■■■■ 43.5
KIFC3-205ENST00000540079 CUL7Q14999 1698 aa22.4■■□□□ 1.18
KIFC3-205ENST00000540079 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
KIFC3-205ENST00000540079 CCNB3Q8WWL7 1395 aa22.4■■□□□ 1.18
KIFC3-205ENST00000540079 RBM19Q9Y4C8 960 aaKnown RBP22.38■■□□□ 1.17
KIFC3-205ENST00000540079 WDR97A6NE52 1622 aa22.37■■□□□ 1.17
KIFC3-205ENST00000540079 FAM50AQ14320 339 aaKnown RBP22.37■■□□□ 1.17
KIFC3-205ENST00000540079 ABCA5Q8WWZ7 1642 aa22.36■■□□□ 1.17
KIFC3-205ENST00000540079 TIAM1Q13009 1591 aa22.35■■□□□ 1.17
KIFC3-205ENST00000540079 MRC2Q9UBG0 1479 aa22.33■■□□□ 1.16
KIFC3-205ENST00000540079 PCF11O94913 1555 aaKnown RBP22.33■■□□□ 1.16
KIFC3-205ENST00000540079 LRRC9Q6ZRR7 1453 aa22.32■■□□□ 1.16
KIFC3-205ENST00000540079 TARBP1Q13395 1621 aaKnown RBP22.31■■□□□ 1.16
KIFC3-205ENST00000540079 MAP3K1Q13233 1512 aa22.31■■□□□ 1.16
KIFC3-205ENST00000540079 PHLDB1Q86UU1 1377 aa22.3■■□□□ 1.16
KIFC3-205ENST00000540079 CTTNBP2Q8WZ74 1663 aa22.28■■□□□ 1.16
KIFC3-205ENST00000540079 TRIM52Q96A61 297 aa22.28■■□□□ 1.16
KIFC3-205ENST00000540079 ERCC6Q03468 1493 aa22.26■■□□□ 1.15
KIFC3-205ENST00000540079 EFCAB5A4FU69 1503 aa22.25■■□□□ 1.15
KIFC3-205ENST00000540079 ARID3CA6NKF2 412 aa22.25■■□□□ 1.15
KIFC3-205ENST00000540079 MSH5O43196 834 aa22.25■■□□□ 1.15
KIFC3-205ENST00000540079 ZNF608Q9ULD9 1512 aaPredicted RBP22.25■■□□□ 1.15
KIFC3-205ENST00000540079 HIRIP3Q9BW71 556 aaPredicted RBP22.24■■□□□ 1.15
KIFC3-205ENST00000540079 DDX10Q13206 875 aaKnown RBP22.23■■□□□ 1.15
KIFC3-205ENST00000540079 FMN1Q68DA7 1419 aa22.23■■□□□ 1.15
KIFC3-205ENST00000540079 MAPKBP1O60336 1514 aa22.23■■□□□ 1.15
KIFC3-205ENST00000540079 CASKIN1Q8WXD9 1431 aa22.22■■□□□ 1.15
KIFC3-205ENST00000540079 FYCO1Q9BQS8 1478 aa22.21■■□□□ 1.15
KIFC3-205ENST00000540079 MTUS2Q5JR59 1369 aa22.18■■□□□ 1.14
KIFC3-205ENST00000540079 FBLN2P98095 1184 aa22.18■■□□□ 1.14
KIFC3-205ENST00000540079 GRIN2BQ13224 1484 aa22.15■■□□□ 1.14
KIFC3-205ENST00000540079 NEFLP07196 543 aa22.14■■□□□ 1.14
KIFC3-205ENST00000540079 IRX6P78412 446 aaPredicted RBP22.14■■□□□ 1.14
KIFC3-205ENST00000540079 PBRM1Q86U86 1689 aa22.14■■□□□ 1.13
KIFC3-205ENST00000540079 RAB3GAP2Q9H2M9 1393 aa22.14■■□□□ 1.13
KIFC3-205ENST00000540079 IFT140Q96RY7 1462 aa22.12■■□□□ 1.13
KIFC3-205ENST00000540079 SNAPC4Q5SXM2 1469 aa22.12■■□□□ 1.13
KIFC3-205ENST00000540079 CFAP43Q8NDM7 1665 aa22.12■■□□□ 1.13
KIFC3-205ENST00000540079 WDR62O43379 1518 aa22.09■■□□□ 1.13
KIFC3-205ENST00000540079 SAMD9Q5K651 1589 aa22.09■■□□□ 1.13
KIFC3-205ENST00000540079 ADAMTS12P58397 1594 aa22.07■■□□□ 1.12
KIFC3-205ENST00000540079 SETD5Q9C0A6 1442 aa22.06■■□□□ 1.12
KIFC3-205ENST00000540079 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
KIFC3-205ENST00000540079 TIMELESSQ9UNS1 1208 aa22.04■■□□□ 1.12
KIFC3-205ENST00000540079 IQGAP2Q13576 1575 aa22.04■■□□□ 1.12
KIFC3-205ENST00000540079 ERICH6Q7L0X2 663 aa22.01■■□□□ 1.11
KIFC3-205ENST00000540079 FGD6Q6ZV73 1430 aa21.99■■□□□ 1.11
KIFC3-205ENST00000540079 SIN3AQ96ST3 1273 aa21.98■■□□□ 1.11
KIFC3-205ENST00000540079 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
KIFC3-205ENST00000540079 PRKCSHP14314 528 aaPredicted RBP21.97■■□□□ 1.11
KIFC3-205ENST00000540079 LRRIQ1Q96JM4 1722 aa21.97■■□□□ 1.11
KIFC3-205ENST00000540079 NCOA2Q15596 1464 aa21.96■■□□□ 1.11
KIFC3-205ENST00000540079 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.95■■□□□ 1.1
KIFC3-205ENST00000540079 CHIC2Q9UKJ5 165 aa21.93■■□□□ 1.1
KIFC3-205ENST00000540079 GRIN2AQ12879 1464 aa21.92■■□□□ 1.1
KIFC3-205ENST00000540079 PPP1R15AO75807 674 aaPredicted RBP21.92■■□□□ 1.1
KIFC3-205ENST00000540079 CDK13Q14004 1512 aaKnown RBP21.91■■□□□ 1.1
KIFC3-205ENST00000540079 CCER2I3L3R5 266 aa21.9■■□□□ 1.1
KIFC3-205ENST00000540079 THOC2Q8NI27 1593 aaKnown RBP21.9■■□□□ 1.1
KIFC3-205ENST00000540079 KIAA0586Q9BVV6 1533 aa21.9■■□□□ 1.1
KIFC3-205ENST00000540079 MAGI3Q5TCQ9 1506 aa21.89■■□□□ 1.1
KIFC3-205ENST00000540079 MYOM3Q5VTT5 1437 aa21.89■■□□□ 1.09
KIFC3-205ENST00000540079 EPRSP07814 1512 aaKnown RBP21.88■■□□□ 1.09
KIFC3-205ENST00000540079 PTPRKQ15262 1439 aa21.87■■□□□ 1.09
KIFC3-205ENST00000540079 RRP7BPQ9NSQ0 103 aa21.86■■□□□ 1.09
KIFC3-205ENST00000540079 CCDC18Q5T9S5 1454 aa21.84■■□□□ 1.09
KIFC3-205ENST00000540079 UGGT2Q9NYU1 1516 aa21.84■■□□□ 1.09
KIFC3-205ENST00000540079 EHBP1L1Q8N3D4 1523 aa21.84■■□□□ 1.09
KIFC3-205ENST00000540079 SUPT6HQ7KZ85 1726 aaKnown RBP21.83■■□□□ 1.09
KIFC3-205ENST00000540079 HECW1Q76N89 1606 aa21.83■■□□□ 1.09
KIFC3-205ENST00000540079 DISP1Q96F81 1524 aa21.83■■□□□ 1.09
KIFC3-205ENST00000540079 JPH4Q96JJ6 628 aa21.82■■□□□ 1.08
KIFC3-205ENST00000540079 DEKP35659 375 aaKnown RBP21.82■■□□□ 1.08
KIFC3-205ENST00000540079 NBR1Q14596 966 aa21.82■■□□□ 1.08
KIFC3-205ENST00000540079 MAGI1Q96QZ7 1491 aaPredicted RBP21.81■■□□□ 1.08
KIFC3-205ENST00000540079 CDK11AQ9UQ88 783 aaPredicted RBP21.81■■□□□ 1.08
KIFC3-205ENST00000540079 SYNJ2O15056 1496 aa21.8■■□□□ 1.08
KIFC3-205ENST00000540079 ANP32CO43423 234 aa21.8■■□□□ 1.08
KIFC3-205ENST00000540079 KIAA0556O60303 1618 aa21.77■■□□□ 1.08
KIFC3-205ENST00000540079 HNRNPUQ00839 825 aaKnown RBP eCLIP21.76■■□□□ 1.07
KIFC3-205ENST00000540079 CEP170Q5SW79 1584 aa21.76■■□□□ 1.07
KIFC3-205ENST00000540079 PTPN23Q9H3S7 1636 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms