RNA–Protein interactions for RNA: ENST00000539976.1

MC1R-201, Transcript of melanocortin 1 receptor, humanhuman

TSL 5

Gene MC1R, Length 2,464 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MC1R-201ENST00000539976 FGD5Q6ZNL6 1462 aa19.86■□□□□ 0.77
MC1R-201ENST00000539976 CCNB3Q8WWL7 1395 aa19.83■□□□□ 0.77
MC1R-201ENST00000539976 NEFLP07196 543 aa19.83■□□□□ 0.77
MC1R-201ENST00000539976 MAPKBP1O60336 1514 aa19.83■□□□□ 0.76
MC1R-201ENST00000539976 DDX10Q13206 875 aaKnown RBP19.78■□□□□ 0.76
MC1R-201ENST00000539976 DNMBPQ6XZF7 1577 aa19.76■□□□□ 0.75
MC1R-201ENST00000539976 RAB3GAP2Q9H2M9 1393 aa19.76■□□□□ 0.75
MC1R-201ENST00000539976 LAMC3Q9Y6N6 1575 aa19.74■□□□□ 0.75
MC1R-201ENST00000539976 WDR97A6NE52 1622 aa19.74■□□□□ 0.75
MC1R-201ENST00000539976 TOPBP1Q92547 1522 aa19.73■□□□□ 0.75
MC1R-201ENST00000539976 PPP1R15AO75807 674 aaPredicted RBP19.73■□□□□ 0.75
MC1R-201ENST00000539976 ITGAEP38570 1179 aa19.72■□□□□ 0.75
MC1R-201ENST00000539976 IGF1RP08069 1367 aa19.72■□□□□ 0.75
MC1R-201ENST00000539976 MSH5O43196 834 aa19.71■□□□□ 0.75
MC1R-201ENST00000539976 CCER2I3L3R5 266 aa19.71■□□□□ 0.75
MC1R-201ENST00000539976 RAD54L2Q9Y4B4 1467 aa19.7■□□□□ 0.74
MC1R-201ENST00000539976 POLA1P09884 1462 aaPredicted RBP19.69■□□□□ 0.74
MC1R-201ENST00000539976 TRIM52Q96A61 297 aa19.68■□□□□ 0.74
MC1R-201ENST00000539976 URB2Q14146 1524 aaKnown RBP19.65■□□□□ 0.74
MC1R-201ENST00000539976 SETD5Q9C0A6 1442 aa19.64■□□□□ 0.74
MC1R-201ENST00000539976 FANCIQ9NVI1 1328 aa19.64■□□□□ 0.73
MC1R-201ENST00000539976 CARMIL1Q5VZK9 1371 aa19.63■□□□□ 0.73
MC1R-201ENST00000539976 ARHGAP35Q9NRY4 1499 aa19.63■□□□□ 0.73
MC1R-201ENST00000539976 ABCA10Q8WWZ4 1543 aa19.63■□□□□ 0.73
MC1R-201ENST00000539976 ANP32CO43423 234 aa19.62■□□□□ 0.73
MC1R-201ENST00000539976 SIN3AQ96ST3 1273 aa19.61■□□□□ 0.73
MC1R-201ENST00000539976 TIMELESSQ9UNS1 1208 aa19.59■□□□□ 0.73
MC1R-201ENST00000539976 KIF21AQ7Z4S6 1674 aa19.59■□□□□ 0.73
MC1R-201ENST00000539976 PDS5BQ9NTI5 1447 aa19.58■□□□□ 0.73
MC1R-201ENST00000539976 TIAM1Q13009 1591 aa19.55■□□□□ 0.72
MC1R-201ENST00000539976 MAP3K1Q13233 1512 aa19.54■□□□□ 0.72
MC1R-201ENST00000539976 HIRIP3Q9BW71 556 aaPredicted RBP19.53■□□□□ 0.72
MC1R-201ENST00000539976 ERICH6Q7L0X2 663 aa19.52■□□□□ 0.72
MC1R-201ENST00000539976 CDK11AQ9UQ88 783 aaPredicted RBP19.52■□□□□ 0.72
MC1R-201ENST00000539976 CUL7Q14999 1698 aa19.47■□□□□ 0.71
MC1R-201ENST00000539976 PHLDB1Q86UU1 1377 aa19.47■□□□□ 0.71
MC1R-201ENST00000539976 LRRC9Q6ZRR7 1453 aa19.46■□□□□ 0.71
MC1R-201ENST00000539976 ABCA5Q8WWZ7 1642 aa19.46■□□□□ 0.71
MC1R-201ENST00000539976 MYT1LQ9UL68 1186 aa19.45■□□□□ 0.7
MC1R-201ENST00000539976 TDRD9Q8NDG6 1382 aaKnown RBP19.45■□□□□ 0.7
MC1R-201ENST00000539976 FAM50AQ14320 339 aaKnown RBP19.42■□□□□ 0.7
MC1R-201ENST00000539976 IRX6P78412 446 aaPredicted RBP19.41■□□□□ 0.7
MC1R-201ENST00000539976 HNRNPUQ00839 825 aaKnown RBP eCLIP19.4■□□□□ 0.7
MC1R-201ENST00000539976 GAPVD1Q14C86 1478 aa19.39■□□□□ 0.7
MC1R-201ENST00000539976 ERICH6BQ5W0A0 696 aa19.39■□□□□ 0.69
MC1R-201ENST00000539976 TARBP1Q13395 1621 aaKnown RBP19.38■□□□□ 0.69
MC1R-201ENST00000539976 CTTNBP2Q8WZ74 1663 aa19.38■□□□□ 0.69
MC1R-201ENST00000539976 CFAP43Q8NDM7 1665 aa19.36■□□□□ 0.69
MC1R-201ENST00000539976 P3H3Q8IVL6 736 aa19.35■□□□□ 0.69
MC1R-201ENST00000539976 TONSLQ96HA7 1378 aa19.35■□□□□ 0.69
MC1R-201ENST00000539976 MRC2Q9UBG0 1479 aa19.34■□□□□ 0.69
MC1R-201ENST00000539976 PPP4R2Q9NY27 417 aa19.33■□□□□ 0.69
MC1R-201ENST00000539976 FHOD3Q2V2M9 1422 aa19.33■□□□□ 0.68
MC1R-201ENST00000539976 DEKP35659 375 aaKnown RBP19.32■□□□□ 0.68
MC1R-201ENST00000539976 PCF11O94913 1555 aaKnown RBP19.32■□□□□ 0.68
MC1R-201ENST00000539976 EFCAB5A4FU69 1503 aa19.3■□□□□ 0.68
MC1R-201ENST00000539976 FHAD1B1AJZ9 1412 aa19.29■□□□□ 0.68
MC1R-201ENST00000539976 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.28■□□□□ 0.68
MC1R-201ENST00000539976 PBRM1Q86U86 1689 aa19.27■□□□□ 0.68
MC1R-201ENST00000539976 AQRO60306 1485 aaKnown RBP eCLIP19.24■□□□□ 0.67
MC1R-201ENST00000539976 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
MC1R-201ENST00000539976 WDR62O43379 1518 aa19.22■□□□□ 0.67
MC1R-201ENST00000539976 UACAQ9BZF9 1416 aa19.21■□□□□ 0.67
MC1R-201ENST00000539976 KDM5BQ9UGL1 1544 aa19.2■□□□□ 0.66
MC1R-201ENST00000539976 ATP1B4Q9UN42 357 aaPredicted RBP19.2■□□□□ 0.66
MC1R-201ENST00000539976 NOP58Q9Y2X3 529 aaKnown RBP19.19■□□□□ 0.66
MC1R-201ENST00000539976 FYCO1Q9BQS8 1478 aa19.19■□□□□ 0.66
MC1R-201ENST00000539976 SAMD9Q5K651 1589 aa19.19■□□□□ 0.66
MC1R-201ENST00000539976 PRKCSHP14314 528 aaPredicted RBP19.19■□□□□ 0.66
MC1R-201ENST00000539976 B4GALNT3Q6L9W6 998 aa19.19■□□□□ 0.66
MC1R-201ENST00000539976 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
MC1R-201ENST00000539976 ZNF608Q9ULD9 1512 aaPredicted RBP19.17■□□□□ 0.66
MC1R-201ENST00000539976 WASHC2AQ641Q2 1341 aa19.17■□□□□ 0.66
MC1R-201ENST00000539976 CASKIN1Q8WXD9 1431 aa19.17■□□□□ 0.66
MC1R-201ENST00000539976 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
MC1R-201ENST00000539976 HFM1A2PYH4 1435 aa19.15■□□□□ 0.66
MC1R-201ENST00000539976 ERCC6Q03468 1493 aa19.15■□□□□ 0.66
MC1R-201ENST00000539976 PTPN23Q9H3S7 1636 aa19.15■□□□□ 0.66
MC1R-201ENST00000539976 GRIN2BQ13224 1484 aa19.14■□□□□ 0.65
MC1R-201ENST00000539976 NCOA2Q15596 1464 aa19.14■□□□□ 0.65
MC1R-201ENST00000539976 SNAPC4Q5SXM2 1469 aa19.14■□□□□ 0.65
MC1R-201ENST00000539976 FGD6Q6ZV73 1430 aa19.14■□□□□ 0.65
MC1R-201ENST00000539976 FMN1Q68DA7 1419 aa19.13■□□□□ 0.65
MC1R-201ENST00000539976 CCDC184Q52MB2 194 aa19.13■□□□□ 0.65
MC1R-201ENST00000539976 HSPA5P11021 654 aaKnown RBP19.12■□□□□ 0.65
MC1R-201ENST00000539976 CNTLNQ9NXG0 1405 aa19.11■□□□□ 0.65
MC1R-201ENST00000539976 PAK3O75914 559 aaPredicted RBP19.11■□□□□ 0.65
MC1R-201ENST00000539976 NBR1Q14596 966 aa19.11■□□□□ 0.65
MC1R-201ENST00000539976 ZBED9Q6R2W3 1325 aa19.11■□□□□ 0.65
MC1R-201ENST00000539976 PTPRKQ15262 1439 aa19.1■□□□□ 0.65
MC1R-201ENST00000539976 THOC2Q8NI27 1593 aaKnown RBP19.1■□□□□ 0.65
MC1R-201ENST00000539976 EIF4G3O43432 1585 aaKnown RBP19.07■□□□□ 0.64
MC1R-201ENST00000539976 LRRIQ1Q96JM4 1722 aa19.07■□□□□ 0.64
MC1R-201ENST00000539976 NAIPQ13075 1403 aa19.07■□□□□ 0.64
MC1R-201ENST00000539976 IQGAP2Q13576 1575 aa19.07■□□□□ 0.64
MC1R-201ENST00000539976 FAM9BQ8IZU0 186 aa19.06■□□□□ 0.64
MC1R-201ENST00000539976 PRKRIP1Q9H875 184 aaPredicted RBP19.06■□□□□ 0.64
MC1R-201ENST00000539976 EIF4G2P78344 907 aaKnown RBP eCLIP19.04■□□□□ 0.641e-7■■■■■ 58.6
MC1R-201ENST00000539976 MRS2Q9HD23 443 aa19.03■□□□□ 0.64
MC1R-201ENST00000539976 IPO9Q96P70 1041 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms