RNA–Protein interactions for RNA: ENST00000539517.6

NOVA1-206, Transcript of NOVA alternative splicing regulator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NOVA1, Length 3,912 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-206ENST00000539517 TOPBP1Q92547 1522 aa9.25□□□□□ -0.93
NOVA1-206ENST00000539517 ARAP1Q96P48 1450 aa9.24□□□□□ -0.93
NOVA1-206ENST00000539517 KIF21BO75037 1637 aa9.24□□□□□ -0.93
NOVA1-206ENST00000539517 PDS5BQ9NTI5 1447 aa9.23□□□□□ -0.93
NOVA1-206ENST00000539517 URB2Q14146 1524 aaKnown RBP9.23□□□□□ -0.93
NOVA1-206ENST00000539517 AQRO60306 1485 aaKnown RBP eCLIP9.22□□□□□ -0.93
NOVA1-206ENST00000539517 ABCA5Q8WWZ7 1642 aa9.21□□□□□ -0.93
NOVA1-206ENST00000539517 ZEB1P37275 1124 aaPredicted RBP9.21□□□□□ -0.94
NOVA1-206ENST00000539517 FAM50AQ14320 339 aaKnown RBP9.21□□□□□ -0.94
NOVA1-206ENST00000539517 ARHGAP35Q9NRY4 1499 aa9.18□□□□□ -0.94
NOVA1-206ENST00000539517 FHOD3Q2V2M9 1422 aa9.18□□□□□ -0.94
NOVA1-206ENST00000539517 DNMBPQ6XZF7 1577 aa9.18□□□□□ -0.94
NOVA1-206ENST00000539517 SHROOM2Q13796 1616 aa9.16□□□□□ -0.94
NOVA1-206ENST00000539517 ERCC6Q03468 1493 aa9.16□□□□□ -0.94
NOVA1-206ENST00000539517 GAPVD1Q14C86 1478 aa9.15□□□□□ -0.95
NOVA1-206ENST00000539517 PBRM1Q86U86 1689 aa9.14□□□□□ -0.95
NOVA1-206ENST00000539517 ERICH3Q5RHP9 1530 aa9.14□□□□□ -0.95
NOVA1-206ENST00000539517 ABCA10Q8WWZ4 1543 aa9.13□□□□□ -0.95
NOVA1-206ENST00000539517 ZNF608Q9ULD9 1512 aaPredicted RBP9.13□□□□□ -0.95
NOVA1-206ENST00000539517 PPP4R3CPQ6ZMV5 832 aa9.12□□□□□ -0.95
NOVA1-206ENST00000539517 CHMP7Q8WUX9 453 aaPredicted RBP9.12□□□□□ -0.95
NOVA1-206ENST00000539517 MRC2Q9UBG0 1479 aa9.08□□□□□ -0.96
NOVA1-206ENST00000539517 CHIC2Q9UKJ5 165 aa9.08□□□□□ -0.96
NOVA1-206ENST00000539517 NEUROD1Q13562 356 aa9.06□□□□□ -0.96
NOVA1-206ENST00000539517 PHLDB1Q86UU1 1377 aa9.06□□□□□ -0.96
NOVA1-206ENST00000539517 CCNB3Q8WWL7 1395 aa9.05□□□□□ -0.96
NOVA1-206ENST00000539517 CLASP1Q7Z460 1538 aa9.05□□□□□ -0.96
NOVA1-206ENST00000539517 MTUS2Q5JR59 1369 aa9.04□□□□□ -0.96
NOVA1-206ENST00000539517 DIEXFQ68CQ4 756 aaKnown RBP9.02□□□□□ -0.96
NOVA1-206ENST00000539517 SIN3AQ96ST3 1273 aa9.02□□□□□ -0.97
NOVA1-206ENST00000539517 RRP7BPQ9NSQ0 103 aa9.01□□□□□ -0.97
NOVA1-206ENST00000539517 FHAD1B1AJZ9 1412 aa9.01□□□□□ -0.97
NOVA1-206ENST00000539517 ZNF777Q9ULD5 760 aaPredicted RBP9□□□□□ -0.97
NOVA1-206ENST00000539517 LRRC9Q6ZRR7 1453 aa8.99□□□□□ -0.97
NOVA1-206ENST00000539517 CUL7Q14999 1698 aa8.99□□□□□ -0.97
NOVA1-206ENST00000539517 JPH4Q96JJ6 628 aa8.99□□□□□ -0.97
NOVA1-206ENST00000539517 HIRIP3Q9BW71 556 aaPredicted RBP8.99□□□□□ -0.97
NOVA1-206ENST00000539517 EIF4G3O43432 1585 aaKnown RBP8.99□□□□□ -0.97
NOVA1-206ENST00000539517 SNAPC4Q5SXM2 1469 aa8.99□□□□□ -0.97
NOVA1-206ENST00000539517 YTHDC1Q96MU7 727 aaKnown RBP8.99□□□□□ -0.97
NOVA1-206ENST00000539517 GRIN2BQ13224 1484 aa8.98□□□□□ -0.97
NOVA1-206ENST00000539517 PCF11O94913 1555 aaKnown RBP8.98□□□□□ -0.97
NOVA1-206ENST00000539517 RAB3GAP2Q9H2M9 1393 aa8.97□□□□□ -0.97
NOVA1-206ENST00000539517 ZNF644Q9H582 1327 aaPredicted RBP8.96□□□□□ -0.97
NOVA1-206ENST00000539517 DHX57Q6P158 1386 aaKnown RBP8.96□□□□□ -0.97
NOVA1-206ENST00000539517 FMN1Q68DA7 1419 aa8.96□□□□□ -0.97
NOVA1-206ENST00000539517 ZNF316A6NFI3 1004 aaPredicted RBP8.96□□□□□ -0.98
NOVA1-206ENST00000539517 TRIM52Q96A61 297 aa8.95□□□□□ -0.98
NOVA1-206ENST00000539517 IFT140Q96RY7 1462 aa8.95□□□□□ -0.98
NOVA1-206ENST00000539517 TIAM1Q13009 1591 aa8.95□□□□□ -0.98
NOVA1-206ENST00000539517 RRBP1Q9P2E9 1410 aaKnown RBP8.95□□□□□ -0.98
NOVA1-206ENST00000539517 ADAMTS12P58397 1594 aa8.94□□□□□ -0.98
NOVA1-206ENST00000539517 CASKIN1Q8WXD9 1431 aa8.94□□□□□ -0.98
NOVA1-206ENST00000539517 CHD1O14646 1710 aa8.93□□□□□ -0.98
NOVA1-206ENST00000539517 CDK13Q14004 1512 aaKnown RBP8.92□□□□□ -0.98
NOVA1-206ENST00000539517 KCNH8Q96L42 1107 aa8.9□□□□□ -0.98
NOVA1-206ENST00000539517 MIER1Q8N108 512 aa8.9□□□□□ -0.98
NOVA1-206ENST00000539517 NCBP3Q53F19 620 aaKnown RBP8.9□□□□□ -0.99
NOVA1-206ENST00000539517 PTPRKQ15262 1439 aa8.89□□□□□ -0.99
NOVA1-206ENST00000539517 SETD5Q9C0A6 1442 aa8.89□□□□□ -0.99
NOVA1-206ENST00000539517 GRIN2AQ12879 1464 aa8.89□□□□□ -0.99
NOVA1-206ENST00000539517 FYCO1Q9BQS8 1478 aa8.89□□□□□ -0.99
NOVA1-206ENST00000539517 PLB1Q6P1J6 1458 aa8.88□□□□□ -0.99
NOVA1-206ENST00000539517 MAPK8IP2Q13387 824 aaPredicted RBP8.88□□□□□ -0.99
NOVA1-206ENST00000539517 SLC4A1APQ9BWU0 796 aaKnown RBP8.88□□□□□ -0.99
NOVA1-206ENST00000539517 NCOA2Q15596 1464 aa8.88□□□□□ -0.99
NOVA1-206ENST00000539517 FGD6Q6ZV73 1430 aa8.88□□□□□ -0.99
NOVA1-206ENST00000539517 IQGAP2Q13576 1575 aa8.88□□□□□ -0.99
NOVA1-206ENST00000539517 CTTNBP2Q8WZ74 1663 aa8.87□□□□□ -0.99
NOVA1-206ENST00000539517 CFDP1Q9UEE9 299 aaPredicted RBP8.87□□□□□ -0.99
NOVA1-206ENST00000539517 EFCAB5A4FU69 1503 aa8.87□□□□□ -0.99
NOVA1-206ENST00000539517 CDK11AQ9UQ88 783 aaPredicted RBP8.86□□□□□ -0.99
NOVA1-206ENST00000539517 PRG4Q92954 1404 aaPredicted RBP8.86□□□□□ -0.99
NOVA1-206ENST00000539517 KIAA0586Q9BVV6 1533 aa8.86□□□□□ -0.99
NOVA1-206ENST00000539517 MAGI3Q5TCQ9 1506 aa8.86□□□□□ -0.99
NOVA1-206ENST00000539517 PLEKHD1A6NEE1 506 aa8.86□□□□□ -0.99
NOVA1-206ENST00000539517 MSH5O43196 834 aa8.85□□□□□ -0.99
NOVA1-206ENST00000539517 EPRSP07814 1512 aaKnown RBP8.85□□□□□ -0.99
NOVA1-206ENST00000539517 DISP1Q96F81 1524 aa8.84□□□□□ -0.99
NOVA1-206ENST00000539517 SYNJ2O15056 1496 aa8.83□□□□□ -1
NOVA1-206ENST00000539517 MAGI1Q96QZ7 1491 aaPredicted RBP8.83□□□□□ -1
NOVA1-206ENST00000539517 MYOM3Q5VTT5 1437 aa8.83□□□□□ -1
NOVA1-206ENST00000539517 HNRNPMP52272 730 aaKnown RBP eCLIP8.82□□□□□ -1
NOVA1-206ENST00000539517 CNGB1Q14028 1251 aaPredicted RBP8.82□□□□□ -1
NOVA1-206ENST00000539517 SCAF1Q9H7N4 1312 aaKnown RBP8.82□□□□□ -1
NOVA1-206ENST00000539517 DDX10Q13206 875 aaKnown RBP8.81□□□□□ -1
NOVA1-206ENST00000539517 SAMD9Q5K651 1589 aa8.81□□□□□ -1
NOVA1-206ENST00000539517 MAP3K1Q13233 1512 aa8.8□□□□□ -1
NOVA1-206ENST00000539517 CEP170Q5SW79 1584 aa8.8□□□□□ -1
NOVA1-206ENST00000539517 CARMIL2Q6F5E8 1435 aa8.8□□□□□ -1
NOVA1-206ENST00000539517 NUP153P49790 1475 aaKnown RBP8.8□□□□□ -1
NOVA1-206ENST00000539517 ZNF326Q5BKZ1 582 aaKnown RBP8.8□□□□□ -1
NOVA1-206ENST00000539517 PTPRGP23470 1445 aa8.8□□□□□ -1
NOVA1-206ENST00000539517 NPM3O75607 178 aaKnown RBP8.8□□□□□ -1
NOVA1-206ENST00000539517 LRRIQ1Q96JM4 1722 aa8.79□□□□□ -1
NOVA1-206ENST00000539517 MPHOSPH9Q99550 1183 aa8.77□□□□□ -1
NOVA1-206ENST00000539517 CLSPNQ9HAW4 1339 aa8.77□□□□□ -1.01
NOVA1-206ENST00000539517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.77□□□□□ -1.01
NOVA1-206ENST00000539517 UGGT2Q9NYU1 1516 aa8.77□□□□□ -1.01
NOVA1-206ENST00000539517 NAIPQ13075 1403 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms