RNA–Protein interactions for RNA: ENST00000538653.1

BCAR3-209, Transcript of BCAR3, NSP family adaptor protein, humanhuman

TSL 2

Gene BCAR3, Length 900 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR3-209ENST00000538653 TOP2AP11388 1531 aaKnown RBP11.58□□□□□ -0.56
BCAR3-209ENST00000538653 GABBR2O75899 941 aa11.56□□□□□ -0.56
BCAR3-209ENST00000538653 CSRNP3Q8WYN3 585 aa11.52□□□□□ -0.57
BCAR3-209ENST00000538653 CD44P16070 742 aaKnown RBP11.45□□□□□ -0.58
BCAR3-209ENST00000538653 FARP1Q9Y4F1 1045 aaPredicted RBP11.45□□□□□ -0.58
BCAR3-209ENST00000538653 SUPT5HO00267 1087 aaKnown RBP11.44□□□□□ -0.58
BCAR3-209ENST00000538653 LAMC3Q9Y6N6 1575 aa11.43□□□□□ -0.58
BCAR3-209ENST00000538653 CCDC88BA6NC98 1476 aa11.41□□□□□ -0.58
BCAR3-209ENST00000538653 CADPSQ9ULU8 1353 aa11.4□□□□□ -0.59
BCAR3-209ENST00000538653 LHX8Q68G74 356 aa11.39□□□□□ -0.59
BCAR3-209ENST00000538653 CFTRP13569 1480 aa11.37□□□□□ -0.59
BCAR3-209ENST00000538653 NESP48681 1621 aa11.36□□□□□ -0.59
BCAR3-209ENST00000538653 CLCN6P51797 869 aa11.35□□□□□ -0.59
BCAR3-209ENST00000538653 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
BCAR3-209ENST00000538653 STAG3Q9UJ98 1225 aa11.34□□□□□ -0.59
BCAR3-209ENST00000538653 EHMT2Q96KQ7 1210 aa11.32□□□□□ -0.6
BCAR3-209ENST00000538653 ERCC6Q03468 1493 aa11.32□□□□□ -0.6
BCAR3-209ENST00000538653 PRDM2Q13029 1718 aa11.31□□□□□ -0.6
BCAR3-209ENST00000538653 POTEIP0CG38 1075 aa11.29□□□□□ -0.6
BCAR3-209ENST00000538653 CREBZFQ9NS37 354 aa11.28□□□□□ -0.6
BCAR3-209ENST00000538653 FANCD2Q9BXW9 1451 aa11.27□□□□□ -0.6
BCAR3-209ENST00000538653 SPDYE4A6NLX3 237 aa11.27□□□□□ -0.61
BCAR3-209ENST00000538653 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
BCAR3-209ENST00000538653 KIF21AQ7Z4S6 1674 aa11.27□□□□□ -0.61
BCAR3-209ENST00000538653 CEP164Q9UPV0 1460 aa11.25□□□□□ -0.61
BCAR3-209ENST00000538653 ZRANB1Q9UGI0 708 aa11.25□□□□□ -0.61
BCAR3-209ENST00000538653 DCBLD2Q96PD2 775 aa11.24□□□□□ -0.61
BCAR3-209ENST00000538653 THOC2Q8NI27 1593 aaKnown RBP11.22□□□□□ -0.61
BCAR3-209ENST00000538653 MRC2Q9UBG0 1479 aa11.21□□□□□ -0.61
BCAR3-209ENST00000538653 CUX2O14529 1486 aa11.19□□□□□ -0.62
BCAR3-209ENST00000538653 WDR62O43379 1518 aa11.17□□□□□ -0.62
BCAR3-209ENST00000538653 PAK3O75914 559 aaPredicted RBP11.16□□□□□ -0.62
BCAR3-209ENST00000538653 ABCC8Q09428 1581 aa11.15□□□□□ -0.62
BCAR3-209ENST00000538653 GALR2O43603 387 aaPredicted RBP11.13□□□□□ -0.63
BCAR3-209ENST00000538653 URB2Q14146 1524 aaKnown RBP11.13□□□□□ -0.63
BCAR3-209ENST00000538653 DNMBPQ6XZF7 1577 aa11.11□□□□□ -0.63
BCAR3-209ENST00000538653 NPM1P06748 294 aaKnown RBP eCLIP11.11□□□□□ -0.63
BCAR3-209ENST00000538653 TOPBP1Q92547 1522 aa11.09□□□□□ -0.63
BCAR3-209ENST00000538653 PHF12Q96QT6 1004 aa11.07□□□□□ -0.64
BCAR3-209ENST00000538653 CUX1P39880 1505 aa11.05□□□□□ -0.64
BCAR3-209ENST00000538653 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
BCAR3-209ENST00000538653 WRNQ14191 1432 aaPredicted RBP eCLIP11.04□□□□□ -0.64
BCAR3-209ENST00000538653 POLA1P09884 1462 aaPredicted RBP11.02□□□□□ -0.65
BCAR3-209ENST00000538653 TOP2BQ02880 1626 aa11.02□□□□□ -0.65
BCAR3-209ENST00000538653 BIVM-ERCC5R4GMW8 1640 aa11.02□□□□□ -0.65
BCAR3-209ENST00000538653 IFT140Q96RY7 1462 aa11.01□□□□□ -0.65
BCAR3-209ENST00000538653 FGD5Q6ZNL6 1462 aa11□□□□□ -0.65
BCAR3-209ENST00000538653 SYNJ1O43426 1573 aa10.99□□□□□ -0.65
BCAR3-209ENST00000538653 TARBP1Q13395 1621 aaKnown RBP10.98□□□□□ -0.65
BCAR3-209ENST00000538653 WDR97A6NE52 1622 aa10.96□□□□□ -0.65
BCAR3-209ENST00000538653 PROM2Q8N271 834 aa10.96□□□□□ -0.65
BCAR3-209ENST00000538653 SOGA1O94964 1423 aa10.95□□□□□ -0.66
BCAR3-209ENST00000538653 OTUD5Q96G74 571 aa10.93□□□□□ -0.66
BCAR3-209ENST00000538653 MS4A3Q96HJ5 214 aa10.93□□□□□ -0.66
BCAR3-209ENST00000538653 RAD54L2Q9Y4B4 1467 aa10.93□□□□□ -0.66
BCAR3-209ENST00000538653 ABCA10Q8WWZ4 1543 aa10.92□□□□□ -0.66
BCAR3-209ENST00000538653 EIF4G3O43432 1585 aaKnown RBP10.91□□□□□ -0.66
BCAR3-209ENST00000538653 POTEB2H3BUK9 544 aa10.91□□□□□ -0.66
BCAR3-209ENST00000538653 ZNF608Q9ULD9 1512 aaPredicted RBP10.9□□□□□ -0.66
BCAR3-209ENST00000538653 PELP1Q8IZL8 1130 aaKnown RBP10.9□□□□□ -0.66
BCAR3-209ENST00000538653 ASTLQ6HA08 431 aaPredicted RBP10.89□□□□□ -0.67
BCAR3-209ENST00000538653 TSPYL2Q9H2G4 693 aaPredicted RBP10.88□□□□□ -0.67
BCAR3-209ENST00000538653 METRNQ9UJH8 293 aa10.87□□□□□ -0.67
BCAR3-209ENST00000538653 ABCA5Q8WWZ7 1642 aa10.87□□□□□ -0.67
BCAR3-209ENST00000538653 AQRO60306 1485 aaKnown RBP eCLIP10.86□□□□□ -0.67
BCAR3-209ENST00000538653 ATMINO43313 823 aaPredicted RBP10.85□□□□□ -0.67
BCAR3-209ENST00000538653 SLC39A7Q92504 469 aa10.85□□□□□ -0.67
BCAR3-209ENST00000538653 TDRD9Q8NDG6 1382 aaKnown RBP10.85□□□□□ -0.67
BCAR3-209ENST00000538653 GAPVD1Q14C86 1478 aa10.85□□□□□ -0.67
BCAR3-209ENST00000538653 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
BCAR3-209ENST00000538653 CCDC61Q9Y6R9 512 aa10.84□□□□□ -0.67
BCAR3-209ENST00000538653 GRIN2BQ13224 1484 aa10.84□□□□□ -0.67
BCAR3-209ENST00000538653 PLEKHG5O94827 1062 aa10.83□□□□□ -0.68
BCAR3-209ENST00000538653 C7P10643 843 aa10.83□□□□□ -0.68
BCAR3-209ENST00000538653 PLSCR2Q9NRY7 297 aa10.83□□□□□ -0.68
BCAR3-209ENST00000538653 KIF27Q86VH2 1401 aa10.82□□□□□ -0.68
BCAR3-209ENST00000538653 PBRM1Q86U86 1689 aa10.82□□□□□ -0.68
BCAR3-209ENST00000538653 MAGI1Q96QZ7 1491 aaPredicted RBP10.81□□□□□ -0.68
BCAR3-209ENST00000538653 ERICH3Q5RHP9 1530 aa10.81□□□□□ -0.68
BCAR3-209ENST00000538653 SNAPC4Q5SXM2 1469 aa10.79□□□□□ -0.68
BCAR3-209ENST00000538653 KIF12Q96FN5 646 aa10.78□□□□□ -0.68
BCAR3-209ENST00000538653 SYNJ2O15056 1496 aa10.76□□□□□ -0.69
BCAR3-209ENST00000538653 MIER1Q8N108 512 aa10.76□□□□□ -0.69
BCAR3-209ENST00000538653 ADAMTS12P58397 1594 aa10.76□□□□□ -0.69
BCAR3-209ENST00000538653 ATN1P54259 1190 aaPredicted RBP10.75□□□□□ -0.69
BCAR3-209ENST00000538653 MAMSTRQ6ZN01 415 aa10.75□□□□□ -0.69
BCAR3-209ENST00000538653 CUL7Q14999 1698 aa10.74□□□□□ -0.69
BCAR3-209ENST00000538653 POTEMA6NI47 508 aa10.74□□□□□ -0.69
BCAR3-209ENST00000538653 FHAD1B1AJZ9 1412 aa10.74□□□□□ -0.69
BCAR3-209ENST00000538653 POTEJP0CG39 1038 aa10.72□□□□□ -0.69
BCAR3-209ENST00000538653 IGF1RP08069 1367 aa10.72□□□□□ -0.69
BCAR3-209ENST00000538653 EEA1Q15075 1411 aa10.72□□□□□ -0.69
BCAR3-209ENST00000538653 CHD1O14646 1710 aa10.72□□□□□ -0.69
BCAR3-209ENST00000538653 POTEGQ6S5H5 508 aa10.71□□□□□ -0.69
BCAR3-209ENST00000538653 RASEFQ8IZ41 740 aa10.71□□□□□ -0.69
BCAR3-209ENST00000538653 BMP2KQ9NSY1 1161 aaPredicted RBP10.71□□□□□ -0.69
BCAR3-209ENST00000538653 GRIN2AQ12879 1464 aa10.7□□□□□ -0.7
BCAR3-209ENST00000538653 MAP3K13O43283 966 aa10.7□□□□□ -0.7
BCAR3-209ENST00000538653 CHMP7Q8WUX9 453 aaPredicted RBP10.7□□□□□ -0.7
BCAR3-209ENST00000538653 TIE1P35590 1138 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms