RNA–Protein interactions for RNA: ENST00000538653.1

BCAR3-209, Transcript of BCAR3, NSP family adaptor protein, humanhuman

TSL 2

Gene BCAR3, Length 900 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR3-209ENST00000538653 AEBP2Q6ZN18 517 aaPredicted RBP22.33■■□□□ 1.17
BCAR3-209ENST00000538653 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
BCAR3-209ENST00000538653 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
BCAR3-209ENST00000538653 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
BCAR3-209ENST00000538653 FOXD1Q16676 465 aa17.82■□□□□ 0.44
BCAR3-209ENST00000538653 MSH5O43196 834 aa16.81■□□□□ 0.28
BCAR3-209ENST00000538653 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
BCAR3-209ENST00000538653 POTEDQ86YR6 584 aa16.7■□□□□ 0.26
BCAR3-209ENST00000538653 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
BCAR3-209ENST00000538653 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
BCAR3-209ENST00000538653 ADRA2BP18089 450 aa16.43■□□□□ 0.22
BCAR3-209ENST00000538653 NISCHQ9Y2I1 1504 aa15.32■□□□□ 0.04
BCAR3-209ENST00000538653 MAPK8IP2Q13387 824 aaPredicted RBP15.13■□□□□ 0.01
BCAR3-209ENST00000538653 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
BCAR3-209ENST00000538653 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
BCAR3-209ENST00000538653 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
BCAR3-209ENST00000538653 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
BCAR3-209ENST00000538653 CACNB1Q02641 598 aaPredicted RBP14.52□□□□□ -0.09
BCAR3-209ENST00000538653 HOXD11P31277 338 aaPredicted RBP14.49□□□□□ -0.09
BCAR3-209ENST00000538653 CNKSR2Q8WXI2 1034 aa14.42□□□□□ -0.1
BCAR3-209ENST00000538653 RNF216Q9NWF9 866 aaPredicted RBP14.34□□□□□ -0.11
BCAR3-209ENST00000538653 RNF39Q9H2S5 420 aa14.29□□□□□ -0.12
BCAR3-209ENST00000538653 C1QBPQ07021 282 aaKnown RBP14.09□□□□□ -0.15
BCAR3-209ENST00000538653 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
BCAR3-209ENST00000538653 DNAJC5BQ9UF47 199 aa14.05□□□□□ -0.16
BCAR3-209ENST00000538653 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.82□□□□□ -0.2
BCAR3-209ENST00000538653 NPM3O75607 178 aaKnown RBP13.81□□□□□ -0.2
BCAR3-209ENST00000538653 CCDC180Q9P1Z9 1646 aa13.61□□□□□ -0.23
BCAR3-209ENST00000538653 U3KPZ7 1027 aaPredicted RBP13.49□□□□□ -0.25
BCAR3-209ENST00000538653 CAPN15O75808 1086 aa13.36□□□□□ -0.27
BCAR3-209ENST00000538653 KCNA4P22459 653 aa13.36□□□□□ -0.27
BCAR3-209ENST00000538653 SPINK5Q9NQ38 1064 aaPredicted RBP13.35□□□□□ -0.27
BCAR3-209ENST00000538653 DSG3P32926 999 aa13.31□□□□□ -0.28
BCAR3-209ENST00000538653 SLC4A2P04920 1241 aa13.22□□□□□ -0.29
BCAR3-209ENST00000538653 APLP2Q06481 763 aa13.17□□□□□ -0.3
BCAR3-209ENST00000538653 ABCC9O60706 1549 aa13.1□□□□□ -0.31
BCAR3-209ENST00000538653 ZNF219Q9P2Y4 722 aaPredicted RBP13.1□□□□□ -0.31
BCAR3-209ENST00000538653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
BCAR3-209ENST00000538653 TRHP20396 242 aaPredicted RBP13.09□□□□□ -0.31
BCAR3-209ENST00000538653 HNRNPUL2Q1KMD3 747 aaKnown RBP13.09□□□□□ -0.31
BCAR3-209ENST00000538653 POTEHQ6S545 545 aa13.06□□□□□ -0.32
BCAR3-209ENST00000538653 ABCB7O75027 752 aa13.03□□□□□ -0.32
BCAR3-209ENST00000538653 SAMD1Q6SPF0 538 aaPredicted RBP13□□□□□ -0.33
BCAR3-209ENST00000538653 MYCNP04198 464 aaPredicted RBP12.81□□□□□ -0.36
BCAR3-209ENST00000538653 ZCCHC6Q5VYS8 1495 aaKnown RBP12.8□□□□□ -0.36
BCAR3-209ENST00000538653 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
BCAR3-209ENST00000538653 NACADO15069 1562 aa12.75□□□□□ -0.37
BCAR3-209ENST00000538653 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
BCAR3-209ENST00000538653 DCAF1Q9Y4B6 1507 aa12.73□□□□□ -0.37
BCAR3-209ENST00000538653 RB1CC1Q8TDY2 1594 aa12.73□□□□□ -0.37
BCAR3-209ENST00000538653 POLA2Q14181 598 aa12.68□□□□□ -0.38
BCAR3-209ENST00000538653 DCAF8L2P0C7V8 631 aa12.64□□□□□ -0.39
BCAR3-209ENST00000538653 SLC4A1APQ9BWU0 796 aaKnown RBP12.6□□□□□ -0.39
BCAR3-209ENST00000538653 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
BCAR3-209ENST00000538653 CHRDL2Q6WN34 429 aa12.53□□□□□ -0.4
BCAR3-209ENST00000538653 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
BCAR3-209ENST00000538653 ATF5Q9Y2D1 282 aaPredicted RBP12.47□□□□□ -0.41
BCAR3-209ENST00000538653 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
BCAR3-209ENST00000538653 UNC13AQ9UPW8 1703 aa12.39□□□□□ -0.43
BCAR3-209ENST00000538653 SCRIBQ14160 1630 aa12.36□□□□□ -0.43
BCAR3-209ENST00000538653 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
BCAR3-209ENST00000538653 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
BCAR3-209ENST00000538653 SHROOM4Q9ULL8 1493 aa12.28□□□□□ -0.44
BCAR3-209ENST00000538653 ZBTB22O15209 634 aa12.27□□□□□ -0.45
BCAR3-209ENST00000538653 REM2Q8IYK8 340 aaPredicted RBP12.26□□□□□ -0.45
BCAR3-209ENST00000538653 PABPN1Q86U42 306 aaKnown RBP eCLIP12.23□□□□□ -0.45
BCAR3-209ENST00000538653 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
BCAR3-209ENST00000538653 PIP4P2Q8N4L2 257 aa12.17□□□□□ -0.46
BCAR3-209ENST00000538653 SP7Q8TDD2 431 aaPredicted RBP12.16□□□□□ -0.46
BCAR3-209ENST00000538653 PITPNM1O00562 1244 aa12.15□□□□□ -0.46
BCAR3-209ENST00000538653 FXR2P51116 673 aaKnown RBP eCLIP12.07□□□□□ -0.48
BCAR3-209ENST00000538653 FBLN2P98095 1184 aa12.07□□□□□ -0.48
BCAR3-209ENST00000538653 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
BCAR3-209ENST00000538653 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
BCAR3-209ENST00000538653 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
BCAR3-209ENST00000538653 HAX1O00165 279 aa12.01□□□□□ -0.49
BCAR3-209ENST00000538653 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
BCAR3-209ENST00000538653 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
BCAR3-209ENST00000538653 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
BCAR3-209ENST00000538653 BAZ1AQ9NRL2 1556 aaPredicted RBP11.88□□□□□ -0.51
BCAR3-209ENST00000538653 CC2D2AQ9P2K1 1620 aa11.88□□□□□ -0.51
BCAR3-209ENST00000538653 CECR2Q9BXF3 1484 aa11.87□□□□□ -0.51
BCAR3-209ENST00000538653 SMARCA4P51532 1647 aa11.86□□□□□ -0.51
BCAR3-209ENST00000538653 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
BCAR3-209ENST00000538653 ZNF692Q9BU19 519 aaPredicted RBP11.85□□□□□ -0.51
BCAR3-209ENST00000538653 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
BCAR3-209ENST00000538653 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
BCAR3-209ENST00000538653 EVX2Q03828 476 aa11.79□□□□□ -0.52
BCAR3-209ENST00000538653 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
BCAR3-209ENST00000538653 MROH2BQ7Z745 1585 aa11.78□□□□□ -0.52
BCAR3-209ENST00000538653 PEG3Q9GZU2 1588 aa11.77□□□□□ -0.53
BCAR3-209ENST00000538653 ATAD2BQ9ULI0 1458 aa11.76□□□□□ -0.53
BCAR3-209ENST00000538653 NCAPD3P42695 1498 aa11.74□□□□□ -0.53
BCAR3-209ENST00000538653 HMGXB3Q12766 1538 aa11.73□□□□□ -0.53
BCAR3-209ENST00000538653 RSF1Q96T23 1441 aaPredicted RBP11.7□□□□□ -0.54
BCAR3-209ENST00000538653 C19orf67A6NJJ6 358 aa11.69□□□□□ -0.54
BCAR3-209ENST00000538653 BAZ1BQ9UIG0 1483 aaKnown RBP11.68□□□□□ -0.54
BCAR3-209ENST00000538653 WIZO95785 1651 aa11.65□□□□□ -0.55
BCAR3-209ENST00000538653 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
BCAR3-209ENST00000538653 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms