RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-208ENST00000536393 RAPGEF2Q9Y4G8 1499 aa9.75□□□□□ -0.85
USP30-208ENST00000536393 SLC4A2P04920 1241 aa9.75□□□□□ -0.85
USP30-208ENST00000536393 RUSC2Q8N2Y8 1516 aa9.75□□□□□ -0.85
USP30-208ENST00000536393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.75□□□□□ -0.85
USP30-208ENST00000536393 CFTRP13569 1480 aa9.74□□□□□ -0.85
USP30-208ENST00000536393 GTF3C3Q9Y5Q9 886 aa9.71□□□□□ -0.86
USP30-208ENST00000536393 FHAD1B1AJZ9 1412 aa9.71□□□□□ -0.86
USP30-208ENST00000536393 ARAP1Q96P48 1450 aa9.69□□□□□ -0.86
USP30-208ENST00000536393 SLC4A1APQ9BWU0 796 aaKnown RBP9.69□□□□□ -0.86
USP30-208ENST00000536393 DHX57Q6P158 1386 aaKnown RBP9.68□□□□□ -0.86
USP30-208ENST00000536393 CCNB3Q8WWL7 1395 aa9.67□□□□□ -0.86
USP30-208ENST00000536393 HNRNPUL2Q1KMD3 747 aaKnown RBP9.67□□□□□ -0.86
USP30-208ENST00000536393 CAPN15O75808 1086 aa9.66□□□□□ -0.86
USP30-208ENST00000536393 EFCAB5A4FU69 1503 aa9.66□□□□□ -0.86
USP30-208ENST00000536393 AQRO60306 1485 aaKnown RBP eCLIP9.66□□□□□ -0.86
USP30-208ENST00000536393 CUX1P39880 1505 aa9.63□□□□□ -0.87
USP30-208ENST00000536393 TTBK1Q5TCY1 1321 aaPredicted RBP9.62□□□□□ -0.87
USP30-208ENST00000536393 TIAM1Q13009 1591 aa9.62□□□□□ -0.87
USP30-208ENST00000536393 SPINK5Q9NQ38 1064 aaPredicted RBP9.61□□□□□ -0.87
USP30-208ENST00000536393 CC2D2AQ9P2K1 1620 aa9.6□□□□□ -0.87
USP30-208ENST00000536393 ARHGAP35Q9NRY4 1499 aa9.6□□□□□ -0.87
USP30-208ENST00000536393 SAMD1Q6SPF0 538 aaPredicted RBP9.6□□□□□ -0.87
USP30-208ENST00000536393 CFAP43Q8NDM7 1665 aa9.6□□□□□ -0.87
USP30-208ENST00000536393 THOC2Q8NI27 1593 aaKnown RBP9.58□□□□□ -0.88
USP30-208ENST00000536393 CUL7Q14999 1698 aa9.58□□□□□ -0.88
USP30-208ENST00000536393 EHMT2Q96KQ7 1210 aa9.58□□□□□ -0.88
USP30-208ENST00000536393 FYCO1Q9BQS8 1478 aa9.58□□□□□ -0.88
USP30-208ENST00000536393 LRRC9Q6ZRR7 1453 aa9.56□□□□□ -0.88
USP30-208ENST00000536393 MYCNP04198 464 aaPredicted RBP9.56□□□□□ -0.88
USP30-208ENST00000536393 SETD5Q9C0A6 1442 aa9.56□□□□□ -0.88
USP30-208ENST00000536393 CADPSQ9ULU8 1353 aa9.55□□□□□ -0.88
USP30-208ENST00000536393 MIER1Q8N108 512 aa9.55□□□□□ -0.88
USP30-208ENST00000536393 ZNF219Q9P2Y4 722 aaPredicted RBP9.55□□□□□ -0.88
USP30-208ENST00000536393 KIF21AQ7Z4S6 1674 aa9.55□□□□□ -0.88
USP30-208ENST00000536393 FMN1Q68DA7 1419 aa9.54□□□□□ -0.88
USP30-208ENST00000536393 FGD5Q6ZNL6 1462 aa9.53□□□□□ -0.88
USP30-208ENST00000536393 IGF1RP08069 1367 aa9.53□□□□□ -0.88
USP30-208ENST00000536393 CCER2I3L3R5 266 aa9.53□□□□□ -0.88
USP30-208ENST00000536393 CARMIL1Q5VZK9 1371 aa9.52□□□□□ -0.88
USP30-208ENST00000536393 ABCA10Q8WWZ4 1543 aa9.52□□□□□ -0.88
USP30-208ENST00000536393 PABPN1Q86U42 306 aaKnown RBP eCLIP9.52□□□□□ -0.89
USP30-208ENST00000536393 FOXD4L1Q9NU39 408 aa9.52□□□□□ -0.89
USP30-208ENST00000536393 AKNAQ7Z591 1439 aa9.51□□□□□ -0.89
USP30-208ENST00000536393 CASKIN1Q8WXD9 1431 aa9.51□□□□□ -0.89
USP30-208ENST00000536393 TRHP20396 242 aaPredicted RBP9.51□□□□□ -0.89
USP30-208ENST00000536393 DSG3P32926 999 aa9.51□□□□□ -0.89
USP30-208ENST00000536393 DNMBPQ6XZF7 1577 aa9.5□□□□□ -0.89
USP30-208ENST00000536393 ERICH6BQ5W0A0 696 aa9.49□□□□□ -0.89
USP30-208ENST00000536393 MAPKBP1O60336 1514 aa9.49□□□□□ -0.89
USP30-208ENST00000536393 RAB3GAP2Q9H2M9 1393 aa9.49□□□□□ -0.89
USP30-208ENST00000536393 CCDC18Q5T9S5 1454 aa9.47□□□□□ -0.89
USP30-208ENST00000536393 CTTNBP2Q8WZ74 1663 aa9.46□□□□□ -0.89
USP30-208ENST00000536393 HFM1A2PYH4 1435 aa9.45□□□□□ -0.9
USP30-208ENST00000536393 KANK4Q5T7N3 995 aaPredicted RBP9.44□□□□□ -0.9
USP30-208ENST00000536393 UACAQ9BZF9 1416 aa9.44□□□□□ -0.9
USP30-208ENST00000536393 WDR97A6NE52 1622 aa9.43□□□□□ -0.9
USP30-208ENST00000536393 LAMC3Q9Y6N6 1575 aa9.43□□□□□ -0.9
USP30-208ENST00000536393 EHBP1L1Q8N3D4 1523 aa9.42□□□□□ -0.9
USP30-208ENST00000536393 SUPT16HQ9Y5B9 1047 aaKnown RBP9.42□□□□□ -0.9
USP30-208ENST00000536393 PCF11O94913 1555 aaKnown RBP9.41□□□□□ -0.9
USP30-208ENST00000536393 SAMD9Q5K651 1589 aa9.41□□□□□ -0.9
USP30-208ENST00000536393 ABCB7O75027 752 aa9.41□□□□□ -0.9
USP30-208ENST00000536393 MYT1LQ9UL68 1186 aa9.4□□□□□ -0.9
USP30-208ENST00000536393 FANCD2Q9BXW9 1451 aa9.4□□□□□ -0.91
USP30-208ENST00000536393 FGD6Q6ZV73 1430 aa9.39□□□□□ -0.91
USP30-208ENST00000536393 SUPT6HQ7KZ85 1726 aaKnown RBP9.39□□□□□ -0.91
USP30-208ENST00000536393 MIA2Q96PC5 1412 aa9.39□□□□□ -0.91
USP30-208ENST00000536393 PHLDB1Q86UU1 1377 aa9.38□□□□□ -0.91
USP30-208ENST00000536393 NEFLP07196 543 aa9.38□□□□□ -0.91
USP30-208ENST00000536393 TCOF1Q13428 1488 aaKnown RBP9.38□□□□□ -0.91
USP30-208ENST00000536393 SNAPC4Q5SXM2 1469 aa9.38□□□□□ -0.91
USP30-208ENST00000536393 ARHGEF11O15085 1522 aa9.37□□□□□ -0.91
USP30-208ENST00000536393 ANP32CO43423 234 aa9.37□□□□□ -0.91
USP30-208ENST00000536393 PPP1R15AO75807 674 aaPredicted RBP9.37□□□□□ -0.91
USP30-208ENST00000536393 YTHDC1Q96MU7 727 aaKnown RBP9.37□□□□□ -0.91
USP30-208ENST00000536393 TOPBP1Q92547 1522 aa9.36□□□□□ -0.91
USP30-208ENST00000536393 MYOM3Q5VTT5 1437 aa9.36□□□□□ -0.91
USP30-208ENST00000536393 POLA1P09884 1462 aaPredicted RBP9.35□□□□□ -0.91
USP30-208ENST00000536393 GCC2Q8IWJ2 1684 aa9.35□□□□□ -0.91
USP30-208ENST00000536393 TONSLQ96HA7 1378 aa9.35□□□□□ -0.91
USP30-208ENST00000536393 HECW1Q76N89 1606 aa9.34□□□□□ -0.91
USP30-208ENST00000536393 ABCA5Q8WWZ7 1642 aa9.34□□□□□ -0.91
USP30-208ENST00000536393 PTPN23Q9H3S7 1636 aa9.34□□□□□ -0.91
USP30-208ENST00000536393 ZBTB22O15209 634 aa9.33□□□□□ -0.92
USP30-208ENST00000536393 GRIN2BQ13224 1484 aa9.33□□□□□ -0.92
USP30-208ENST00000536393 ROCK1Q13464 1354 aa9.32□□□□□ -0.92
USP30-208ENST00000536393 MTUS2Q5JR59 1369 aa9.32□□□□□ -0.92
USP30-208ENST00000536393 PDS5BQ9NTI5 1447 aa9.31□□□□□ -0.92
USP30-208ENST00000536393 UGGT2Q9NYU1 1516 aa9.31□□□□□ -0.92
USP30-208ENST00000536393 ANP32EQ9BTT0 268 aa9.3□□□□□ -0.92
USP30-208ENST00000536393 NAIPQ13075 1403 aa9.3□□□□□ -0.92
USP30-208ENST00000536393 ARID4BQ4LE39 1312 aaPredicted RBP9.3□□□□□ -0.92
USP30-208ENST00000536393 NCOA2Q15596 1464 aa9.28□□□□□ -0.92
USP30-208ENST00000536393 POLA2Q14181 598 aa9.27□□□□□ -0.93
USP30-208ENST00000536393 POLR1AO95602 1720 aaPredicted RBP9.27□□□□□ -0.93
USP30-208ENST00000536393 GAPVD1Q14C86 1478 aa9.27□□□□□ -0.93
USP30-208ENST00000536393 FHOD3Q2V2M9 1422 aa9.26□□□□□ -0.93
USP30-208ENST00000536393 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
USP30-208ENST00000536393 FANCIQ9NVI1 1328 aa9.25□□□□□ -0.93
USP30-208ENST00000536393 FAM50AQ14320 339 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms