RNA–Protein interactions for RNA: ENST00000536393.5

USP30-208, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-208ENST00000536393 AEBP2Q6ZN18 517 aaPredicted RBP15.96■□□□□ 0.15
USP30-208ENST00000536393 CHIC1Q5VXU3 224 aa15.35■□□□□ 0.05
USP30-208ENST00000536393 SENP3Q9H4L4 574 aaPredicted RBP13.7□□□□□ -0.22
USP30-208ENST00000536393 NISCHQ9Y2I1 1504 aa13.5□□□□□ -0.25
USP30-208ENST00000536393 PHF23Q9BUL5 403 aaPredicted RBP13.49□□□□□ -0.25
USP30-208ENST00000536393 FOXD1Q16676 465 aa12.69□□□□□ -0.38
USP30-208ENST00000536393 PLPPR3Q6T4P5 718 aa12.37□□□□□ -0.43
USP30-208ENST00000536393 PIAS4Q8N2W9 510 aaPredicted RBP11.95□□□□□ -0.5
USP30-208ENST00000536393 MSH5O43196 834 aa11.92□□□□□ -0.5
USP30-208ENST00000536393 ADRA2BP18089 450 aa11.92□□□□□ -0.5
USP30-208ENST00000536393 PPP6R1Q9UPN7 881 aa11.92□□□□□ -0.5
USP30-208ENST00000536393 CCDC180Q9P1Z9 1646 aa11.67□□□□□ -0.54
USP30-208ENST00000536393 ZCCHC6Q5VYS8 1495 aaKnown RBP11.51□□□□□ -0.57
USP30-208ENST00000536393 DCAF1Q9Y4B6 1507 aa11.42□□□□□ -0.58
USP30-208ENST00000536393 POTEDQ86YR6 584 aa11.33□□□□□ -0.6
USP30-208ENST00000536393 MYO15BQ96JP2 1530 aa11.14□□□□□ -0.63
USP30-208ENST00000536393 SCAF1Q9H7N4 1312 aaKnown RBP11.02□□□□□ -0.65
USP30-208ENST00000536393 SHROOM4Q9ULL8 1493 aa10.98□□□□□ -0.65
USP30-208ENST00000536393 SUPT5HO00267 1087 aaKnown RBP10.93□□□□□ -0.66
USP30-208ENST00000536393 HRCP23327 699 aa10.9□□□□□ -0.66
USP30-208ENST00000536393 MAPK8IP2Q13387 824 aaPredicted RBP10.88□□□□□ -0.67
USP30-208ENST00000536393 ABCC9O60706 1549 aa10.87□□□□□ -0.67
USP30-208ENST00000536393 DMRT2Q9Y5R5 561 aa10.85□□□□□ -0.67
USP30-208ENST00000536393 PPP4R3CPQ6ZMV5 832 aa10.82□□□□□ -0.68
USP30-208ENST00000536393 ZEB1P37275 1124 aaPredicted RBP10.75□□□□□ -0.69
USP30-208ENST00000536393 NACADO15069 1562 aa10.72□□□□□ -0.69
USP30-208ENST00000536393 RB1CC1Q8TDY2 1594 aa10.7□□□□□ -0.7
USP30-208ENST00000536393 TRIM26Q12899 539 aaPredicted RBP10.66□□□□□ -0.7
USP30-208ENST00000536393 RSF1Q96T23 1441 aaPredicted RBP10.63□□□□□ -0.71
USP30-208ENST00000536393 CNKSR2Q8WXI2 1034 aa10.62□□□□□ -0.71
USP30-208ENST00000536393 DCAF8L2P0C7V8 631 aa10.55□□□□□ -0.72
USP30-208ENST00000536393 PELP1Q8IZL8 1130 aaKnown RBP10.55□□□□□ -0.72
USP30-208ENST00000536393 PCGF6Q9BYE7 350 aa10.55□□□□□ -0.72
USP30-208ENST00000536393 NCBP3Q53F19 620 aaKnown RBP10.52□□□□□ -0.73
USP30-208ENST00000536393 HOXD11P31277 338 aaPredicted RBP10.5□□□□□ -0.73
USP30-208ENST00000536393 RNF216Q9NWF9 866 aaPredicted RBP10.48□□□□□ -0.73
USP30-208ENST00000536393 SCRIBQ14160 1630 aa10.47□□□□□ -0.73
USP30-208ENST00000536393 BAZ1AQ9NRL2 1556 aaPredicted RBP10.46□□□□□ -0.74
USP30-208ENST00000536393 DCAF8L1A6NGE4 600 aa10.45□□□□□ -0.74
USP30-208ENST00000536393 EEA1Q15075 1411 aa10.44□□□□□ -0.74
USP30-208ENST00000536393 TRIM41Q8WV44 630 aa10.43□□□□□ -0.74
USP30-208ENST00000536393 WRNQ14191 1432 aaPredicted RBP eCLIP10.38□□□□□ -0.75
USP30-208ENST00000536393 EIF4G1Q04637 1599 aaKnown RBP10.35□□□□□ -0.75
USP30-208ENST00000536393 TOP2AP11388 1531 aaKnown RBP10.33□□□□□ -0.76
USP30-208ENST00000536393 LOC105371045A0A1W2PR82 267 aa10.31□□□□□ -0.76
USP30-208ENST00000536393 MROH2BQ7Z745 1585 aa10.31□□□□□ -0.76
USP30-208ENST00000536393 NPM3O75607 178 aaKnown RBP10.28□□□□□ -0.76
USP30-208ENST00000536393 MYT1Q01538 1121 aa10.26□□□□□ -0.77
USP30-208ENST00000536393 PEG3Q9GZU2 1588 aa10.26□□□□□ -0.77
USP30-208ENST00000536393 SMARCA4P51532 1647 aa10.24□□□□□ -0.77
USP30-208ENST00000536393 TNIKQ9UKE5 1360 aa10.23□□□□□ -0.77
USP30-208ENST00000536393 CECR2Q9BXF3 1484 aa10.23□□□□□ -0.77
USP30-208ENST00000536393 WIZO95785 1651 aa10.22□□□□□ -0.77
USP30-208ENST00000536393 KCNA4P22459 653 aa10.18□□□□□ -0.78
USP30-208ENST00000536393 SMARCA2P51531 1590 aa10.17□□□□□ -0.78
USP30-208ENST00000536393 PPARGC1BQ86YN6 1023 aaKnown RBP10.15□□□□□ -0.78
USP30-208ENST00000536393 DNAJC5BQ9UF47 199 aa10.15□□□□□ -0.78
USP30-208ENST00000536393 BAZ1BQ9UIG0 1483 aaKnown RBP10.14□□□□□ -0.79
USP30-208ENST00000536393 GOLGA3Q08378 1498 aa10.13□□□□□ -0.79
USP30-208ENST00000536393 CACNB1Q02641 598 aaPredicted RBP10.13□□□□□ -0.79
USP30-208ENST00000536393 KIF21BO75037 1637 aa10.13□□□□□ -0.79
USP30-208ENST00000536393 RNF39Q9H2S5 420 aa10.12□□□□□ -0.79
USP30-208ENST00000536393 CLSPNQ9HAW4 1339 aa10.11□□□□□ -0.79
USP30-208ENST00000536393 CENPBP07199 599 aaPredicted RBP10.11□□□□□ -0.79
USP30-208ENST00000536393 CCDC88BA6NC98 1476 aa10.1□□□□□ -0.79
USP30-208ENST00000536393 CEP164Q9UPV0 1460 aa10.1□□□□□ -0.79
USP30-208ENST00000536393 CEP162Q5TB80 1403 aa10.09□□□□□ -0.79
USP30-208ENST00000536393 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.05□□□□□ -0.8
USP30-208ENST00000536393 CSRNP3Q8WYN3 585 aa10.04□□□□□ -0.8
USP30-208ENST00000536393 UNC13AQ9UPW8 1703 aa10.04□□□□□ -0.8
USP30-208ENST00000536393 C1QBPQ07021 282 aaKnown RBP10.02□□□□□ -0.81
USP30-208ENST00000536393 CCER1Q8TC90 406 aaPredicted RBP10.01□□□□□ -0.81
USP30-208ENST00000536393 ERICH3Q5RHP9 1530 aa10.01□□□□□ -0.81
USP30-208ENST00000536393 ACIN1Q9UKV3 1341 aaKnown RBP9.99□□□□□ -0.81
USP30-208ENST00000536393 VPS8Q8N3P4 1428 aa9.98□□□□□ -0.81
USP30-208ENST00000536393 FAM9AQ8IZU1 332 aaPredicted RBP9.96□□□□□ -0.82
USP30-208ENST00000536393 ABCC8Q09428 1581 aa9.94□□□□□ -0.82
USP30-208ENST00000536393 DIEXFQ68CQ4 756 aaKnown RBP9.94□□□□□ -0.82
USP30-208ENST00000536393 BICRAQ9NZM4 1560 aa9.93□□□□□ -0.82
USP30-208ENST00000536393 TOP2BQ02880 1626 aa9.93□□□□□ -0.82
USP30-208ENST00000536393 BIVM-ERCC5R4GMW8 1640 aa9.93□□□□□ -0.82
USP30-208ENST00000536393 HMGXB3Q12766 1538 aa9.92□□□□□ -0.82
USP30-208ENST00000536393 ZNF316A6NFI3 1004 aaPredicted RBP9.92□□□□□ -0.82
USP30-208ENST00000536393 ATAD2BQ9ULI0 1458 aa9.91□□□□□ -0.82
USP30-208ENST00000536393 SOGA1O94964 1423 aa9.9□□□□□ -0.82
USP30-208ENST00000536393 CLIP1P30622 1438 aa9.9□□□□□ -0.82
USP30-208ENST00000536393 MAP3K1Q13233 1512 aa9.89□□□□□ -0.83
USP30-208ENST00000536393 CUX2O14529 1486 aa9.87□□□□□ -0.83
USP30-208ENST00000536393 APLP2Q06481 763 aa9.87□□□□□ -0.83
USP30-208ENST00000536393 PRXQ9BXM0 1461 aa9.85□□□□□ -0.83
USP30-208ENST00000536393 SYNJ1O43426 1573 aa9.85□□□□□ -0.83
USP30-208ENST00000536393 UBTFP17480 764 aaKnown RBP9.85□□□□□ -0.83
USP30-208ENST00000536393 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.83□□□□□ -0.84
USP30-208ENST00000536393 NCAPD3P42695 1498 aa9.83□□□□□ -0.84
USP30-208ENST00000536393 RRBP1Q9P2E9 1410 aaKnown RBP9.81□□□□□ -0.84
USP30-208ENST00000536393 U3KPZ7 1027 aaPredicted RBP9.8□□□□□ -0.84
USP30-208ENST00000536393 PRDM2Q13029 1718 aa9.79□□□□□ -0.84
USP30-208ENST00000536393 TIMELESSQ9UNS1 1208 aa9.79□□□□□ -0.84
USP30-208ENST00000536393 KIF27Q86VH2 1401 aa9.79□□□□□ -0.84
USP30-208ENST00000536393 NEUROD1Q13562 356 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms