RNA–Protein interactions for RNA: ENST00000535011.6

CALU-205, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 3,210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-205ENST00000535011 HIRIP3Q9BW71 556 aaPredicted RBP23.99■■□□□ 1.43
CALU-205ENST00000535011 SIN3AQ96ST3 1273 aa23.98■■□□□ 1.43
CALU-205ENST00000535011 PHLDB1Q86UU1 1377 aa23.96■■□□□ 1.43
CALU-205ENST00000535011 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
CALU-205ENST00000535011 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
CALU-205ENST00000535011 RAB3GAP2Q9H2M9 1393 aa23.94■■□□□ 1.42
CALU-205ENST00000535011 TOPBP1Q92547 1522 aa23.92■■□□□ 1.42
CALU-205ENST00000535011 RRBP1Q9P2E9 1410 aaKnown RBP23.88■■□□□ 1.41
CALU-205ENST00000535011 PRDM2Q13029 1718 aa23.82■■□□□ 1.4
CALU-205ENST00000535011 PCF11O94913 1555 aaKnown RBP23.82■■□□□ 1.4
CALU-205ENST00000535011 TIAM1Q13009 1591 aa23.81■■□□□ 1.4
CALU-205ENST00000535011 LRRC9Q6ZRR7 1453 aa23.81■■□□□ 1.4
CALU-205ENST00000535011 URB2Q14146 1524 aaKnown RBP23.81■■□□□ 1.4
CALU-205ENST00000535011 CHIC2Q9UKJ5 165 aa23.78■■□□□ 1.4
CALU-205ENST00000535011 DNMBPQ6XZF7 1577 aa23.78■■□□□ 1.4
CALU-205ENST00000535011 KCNH8Q96L42 1107 aa23.77■■□□□ 1.4
CALU-205ENST00000535011 BCANQ96GW7 911 aa23.74■■□□□ 1.39
CALU-205ENST00000535011 MTUS2Q5JR59 1369 aa23.73■■□□□ 1.39
CALU-205ENST00000535011 FHAD1B1AJZ9 1412 aa23.73■■□□□ 1.39
CALU-205ENST00000535011 ABCA10Q8WWZ4 1543 aa23.72■■□□□ 1.39
CALU-205ENST00000535011 SETD5Q9C0A6 1442 aa23.69■■□□□ 1.38
CALU-205ENST00000535011 DDX10Q13206 875 aaKnown RBP23.69■■□□□ 1.38
CALU-205ENST00000535011 RRP7BPQ9NSQ0 103 aa23.67■■□□□ 1.38
CALU-205ENST00000535011 AQRO60306 1485 aaKnown RBP eCLIP23.66■■□□□ 1.387e-9■■■■□ 24
CALU-205ENST00000535011 GAPVD1Q14C86 1478 aa23.66■■□□□ 1.38
CALU-205ENST00000535011 FBLN2P98095 1184 aa23.64■■□□□ 1.37
CALU-205ENST00000535011 CLSPNQ9HAW4 1339 aa23.61■■□□□ 1.37
CALU-205ENST00000535011 MAPKBP1O60336 1514 aa23.6■■□□□ 1.37
CALU-205ENST00000535011 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
CALU-205ENST00000535011 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
CALU-205ENST00000535011 CNGB1Q14028 1251 aaPredicted RBP23.55■■□□□ 1.36
CALU-205ENST00000535011 KIF21AQ7Z4S6 1674 aa23.55■■□□□ 1.36
CALU-205ENST00000535011 CASKIN1Q8WXD9 1431 aa23.54■■□□□ 1.36
CALU-205ENST00000535011 FOXD1Q16676 465 aa23.53■■□□□ 1.36
CALU-205ENST00000535011 FMN1Q68DA7 1419 aa23.5■■□□□ 1.35
CALU-205ENST00000535011 FYCO1Q9BQS8 1478 aa23.5■■□□□ 1.35
CALU-205ENST00000535011 WDR97A6NE52 1622 aa23.5■■□□□ 1.35
CALU-205ENST00000535011 PTPRKQ15262 1439 aa23.5■■□□□ 1.35
CALU-205ENST00000535011 LAMC3Q9Y6N6 1575 aa23.48■■□□□ 1.35
CALU-205ENST00000535011 FGD6Q6ZV73 1430 aa23.48■■□□□ 1.35
CALU-205ENST00000535011 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
CALU-205ENST00000535011 CTTNBP2Q8WZ74 1663 aa23.44■■□□□ 1.34
CALU-205ENST00000535011 CUL7Q14999 1698 aa23.43■■□□□ 1.34
CALU-205ENST00000535011 SNAPC4Q5SXM2 1469 aa23.43■■□□□ 1.34
CALU-205ENST00000535011 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
CALU-205ENST00000535011 TONSLQ96HA7 1378 aa23.42■■□□□ 1.34
CALU-205ENST00000535011 NCOA2Q15596 1464 aa23.42■■□□□ 1.34
CALU-205ENST00000535011 EFCAB5A4FU69 1503 aa23.41■■□□□ 1.34
CALU-205ENST00000535011 MAP3K1Q13233 1512 aa23.4■■□□□ 1.34
CALU-205ENST00000535011 ZNF777Q9ULD5 760 aaPredicted RBP23.39■■□□□ 1.33
CALU-205ENST00000535011 CDK13Q14004 1512 aaKnown RBP23.39■■□□□ 1.33
CALU-205ENST00000535011 CCDC18Q5T9S5 1454 aa23.38■■□□□ 1.33
CALU-205ENST00000535011 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
CALU-205ENST00000535011 ZNF644Q9H582 1327 aaPredicted RBP23.37■■□□□ 1.33
CALU-205ENST00000535011 SUPT16HQ9Y5B9 1047 aaKnown RBP23.37■■□□□ 1.33
CALU-205ENST00000535011 PPP1R15AO75807 674 aaPredicted RBP23.34■■□□□ 1.33
CALU-205ENST00000535011 MAGI3Q5TCQ9 1506 aa23.32■■□□□ 1.32
CALU-205ENST00000535011 LRRIQ1Q96JM4 1722 aa23.31■■□□□ 1.32
CALU-205ENST00000535011 MYOM3Q5VTT5 1437 aa23.31■■□□□ 1.32
CALU-205ENST00000535011 GRIN2BQ13224 1484 aa23.28■■□□□ 1.32
CALU-205ENST00000535011 CHMP7Q8WUX9 453 aaPredicted RBP23.28■■□□□ 1.32
CALU-205ENST00000535011 FKBP8Q14318 412 aa23.27■■□□□ 1.32
CALU-205ENST00000535011 SENP3-EIF4A1A0A087X0R7 540 aa23.25■■□□□ 1.31
CALU-205ENST00000535011 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
CALU-205ENST00000535011 ERCC6Q03468 1493 aa23.25■■□□□ 1.31
CALU-205ENST00000535011 NAIPQ13075 1403 aa23.24■■□□□ 1.31
CALU-205ENST00000535011 ZNF326Q5BKZ1 582 aaKnown RBP23.24■■□□□ 1.31
CALU-205ENST00000535011 SAMD9Q5K651 1589 aa23.22■■□□□ 1.31
CALU-205ENST00000535011 POLR3GLQ9BT43 218 aa23.22■■□□□ 1.31
CALU-205ENST00000535011 MRC2Q9UBG0 1479 aa23.21■■□□□ 1.31
CALU-205ENST00000535011 IRX6P78412 446 aaPredicted RBP23.21■■□□□ 1.31
CALU-205ENST00000535011 HFM1A2PYH4 1435 aa23.18■■□□□ 1.3
CALU-205ENST00000535011 ANP32CO43423 234 aa23.18■■□□□ 1.3
CALU-205ENST00000535011 IQGAP2Q13576 1575 aa23.18■■□□□ 1.3
CALU-205ENST00000535011 THOC2Q8NI27 1593 aaKnown RBP23.18■■□□□ 1.3
CALU-205ENST00000535011 EPRSP07814 1512 aaKnown RBP23.17■■□□□ 1.3
CALU-205ENST00000535011 PTPN23Q9H3S7 1636 aa23.17■■□□□ 1.3
CALU-205ENST00000535011 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
CALU-205ENST00000535011 SUPT6HQ7KZ85 1726 aaKnown RBP23.15■■□□□ 1.3
CALU-205ENST00000535011 UACAQ9BZF9 1416 aa23.14■■□□□ 1.3
CALU-205ENST00000535011 MPHOSPH9Q99550 1183 aa23.13■■□□□ 1.29
CALU-205ENST00000535011 EHBP1L1Q8N3D4 1523 aa23.13■■□□□ 1.29
CALU-205ENST00000535011 KDM6BO15054 1643 aa23.12■■□□□ 1.29
CALU-205ENST00000535011 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
CALU-205ENST00000535011 HSPA5P11021 654 aaKnown RBP23.1■■□□□ 1.29
CALU-205ENST00000535011 L3MBTL2Q969R5 705 aa23.1■■□□□ 1.29
CALU-205ENST00000535011 SLC4A1APQ9BWU0 796 aaKnown RBP23.1■■□□□ 1.29
CALU-205ENST00000535011 UGGT2Q9NYU1 1516 aa23.08■■□□□ 1.29
CALU-205ENST00000535011 PRG4Q92954 1404 aaPredicted RBP23.08■■□□□ 1.29
CALU-205ENST00000535011 CFDP1Q9UEE9 299 aaPredicted RBP23.07■■□□□ 1.28
CALU-205ENST00000535011 NEFLP07196 543 aa23.05■■□□□ 1.28
CALU-205ENST00000535011 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.05■■□□□ 1.283e-26■■□□□ 13.1
CALU-205ENST00000535011 PLB1Q6P1J6 1458 aa23.05■■□□□ 1.28
CALU-205ENST00000535011 HECW1Q76N89 1606 aa23.04■■□□□ 1.28
CALU-205ENST00000535011 TSHZ2Q9NRE2 1034 aa22.99■■□□□ 1.27
CALU-205ENST00000535011 IFT140Q96RY7 1462 aa22.99■■□□□ 1.27
CALU-205ENST00000535011 JPH4Q96JJ6 628 aa22.99■■□□□ 1.27
CALU-205ENST00000535011 CDK11AQ9UQ88 783 aaPredicted RBP22.99■■□□□ 1.27
CALU-205ENST00000535011 WDR62O43379 1518 aa22.99■■□□□ 1.27
CALU-205ENST00000535011 HNRNPUQ00839 825 aaKnown RBP eCLIP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms