RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
TNC-209ENST00000534839 SPINK5Q9NQ38 1064 aaPredicted RBP20.05■□□□□ 0.8
TNC-209ENST00000534839 TARBP1Q13395 1621 aaKnown RBP19.99■□□□□ 0.79
TNC-209ENST00000534839 SYNJ1O43426 1573 aa19.98■□□□□ 0.79
TNC-209ENST00000534839 ATF5Q9Y2D1 282 aaPredicted RBP19.97■□□□□ 0.79
TNC-209ENST00000534839 KIF13AQ9H1H9 1805 aa19.95■□□□□ 0.78
TNC-209ENST00000534839 FBXO41Q8TF61 875 aa19.93■□□□□ 0.78
TNC-209ENST00000534839 ERCC6L2Q5T890 1561 aa19.92■□□□□ 0.78
TNC-209ENST00000534839 PRDM2Q13029 1718 aa19.92■□□□□ 0.78
TNC-209ENST00000534839 CHMP7Q8WUX9 453 aaPredicted RBP19.9■□□□□ 0.78
TNC-209ENST00000534839 SNAPC4Q5SXM2 1469 aa19.9■□□□□ 0.78
TNC-209ENST00000534839 CAPN15O75808 1086 aa19.87■□□□□ 0.77
TNC-209ENST00000534839 ABCC8Q09428 1581 aa19.87■□□□□ 0.77
TNC-209ENST00000534839 HECW2Q9P2P5 1572 aa19.87■□□□□ 0.77
TNC-209ENST00000534839 DNMBPQ6XZF7 1577 aa19.84■□□□□ 0.77
TNC-209ENST00000534839 ATXN8OSP0DMR3 200 aa19.84■□□□□ 0.77
TNC-209ENST00000534839 APLP2Q06481 763 aa19.83■□□□□ 0.77
TNC-209ENST00000534839 LMTK3Q96Q04 1460 aa19.83■□□□□ 0.76
TNC-209ENST00000534839 TDRD9Q8NDG6 1382 aaKnown RBP19.83■□□□□ 0.76
TNC-209ENST00000534839 POLA1P09884 1462 aaPredicted RBP19.78■□□□□ 0.76
TNC-209ENST00000534839 RAD54L2Q9Y4B4 1467 aa19.77■□□□□ 0.76
TNC-209ENST00000534839 KDM6BO15054 1643 aa19.75■□□□□ 0.75
TNC-209ENST00000534839 MAGI1Q96QZ7 1491 aaPredicted RBP19.74■□□□□ 0.75
TNC-209ENST00000534839 FAM69CQ0P6D2 419 aa19.73■□□□□ 0.75
TNC-209ENST00000534839 SYNJ2O15056 1496 aa19.72■□□□□ 0.75
TNC-209ENST00000534839 SOCS7O14512 581 aa19.71■□□□□ 0.75
TNC-209ENST00000534839 TOP2AP11388 1531 aaKnown RBP19.7■□□□□ 0.74
TNC-209ENST00000534839 ADGRL1O94910 1474 aa19.69■□□□□ 0.74
TNC-209ENST00000534839 ZNF219Q9P2Y4 722 aaPredicted RBP19.67■□□□□ 0.74
TNC-209ENST00000534839 ABCC10Q5T3U5 1492 aa19.67■□□□□ 0.74
TNC-209ENST00000534839 ILDR2Q71H61 639 aa19.66■□□□□ 0.74
TNC-209ENST00000534839 SOGA1O94964 1423 aa19.66■□□□□ 0.74
TNC-209ENST00000534839 GRIN2BQ13224 1484 aa19.62■□□□□ 0.73
TNC-209ENST00000534839 WDR97A6NE52 1622 aa19.62■□□□□ 0.73
TNC-209ENST00000534839 DSG3P32926 999 aa19.6■□□□□ 0.73
TNC-209ENST00000534839 DIP2BQ9P265 1576 aa19.57■□□□□ 0.72
TNC-209ENST00000534839 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
TNC-209ENST00000534839 ABCB7O75027 752 aa19.56■□□□□ 0.72
TNC-209ENST00000534839 CCDC88BA6NC98 1476 aa19.53■□□□□ 0.72
TNC-209ENST00000534839 TSPOAP1O95153 1857 aa19.48■□□□□ 0.71
TNC-209ENST00000534839 MAPKBP1O60336 1514 aa19.47■□□□□ 0.71
TNC-209ENST00000534839 POLA2Q14181 598 aa19.46■□□□□ 0.71
TNC-209ENST00000534839 FGD5Q6ZNL6 1462 aa19.46■□□□□ 0.71
TNC-209ENST00000534839 DISP3Q9P2K9 1392 aa19.44■□□□□ 0.7
TNC-209ENST00000534839 PBRM1Q86U86 1689 aa19.44■□□□□ 0.7
TNC-209ENST00000534839 SHROOM2Q13796 1616 aa19.43■□□□□ 0.7
TNC-209ENST00000534839 NPM1P06748 294 aaKnown RBP eCLIP19.42■□□□□ 0.7
TNC-209ENST00000534839 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
TNC-209ENST00000534839 NUP160Q12769 1436 aa19.37■□□□□ 0.69
TNC-209ENST00000534839 PRG4Q92954 1404 aaPredicted RBP19.31■□□□□ 0.68
TNC-209ENST00000534839 ADCY10Q96PN6 1610 aa19.27■□□□□ 0.68
TNC-209ENST00000534839 COL17A1Q9UMD9 1497 aaPredicted RBP19.25■□□□□ 0.67
TNC-209ENST00000534839 ABCA5Q8WWZ7 1642 aa19.24■□□□□ 0.67
TNC-209ENST00000534839 CUX1P39880 1505 aa19.24■□□□□ 0.67
TNC-209ENST00000534839 PPRC1Q5VV67 1664 aaKnown RBP19.22■□□□□ 0.67
TNC-209ENST00000534839 TOP2BQ02880 1626 aa19.19■□□□□ 0.66
TNC-209ENST00000534839 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
TNC-209ENST00000534839 JPH4Q96JJ6 628 aa19.18■□□□□ 0.66
TNC-209ENST00000534839 ABCA10Q8WWZ4 1543 aa19.14■□□□□ 0.65
TNC-209ENST00000534839 SPATA31D1Q6ZQQ2 1576 aa19.12■□□□□ 0.65
TNC-209ENST00000534839 CERKQ8TCT0 537 aa19.08■□□□□ 0.64
TNC-209ENST00000534839 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.64
TNC-209ENST00000534839 MKRN4PQ13434 485 aaPredicted RBP19.07■□□□□ 0.64
TNC-209ENST00000534839 GLI2P10070 1586 aa19.06■□□□□ 0.64
TNC-209ENST00000534839 ASXL2Q76L83 1435 aa18.98■□□□□ 0.63
TNC-209ENST00000534839 ZBTB12Q9Y330 459 aaPredicted RBP18.97■□□□□ 0.63
TNC-209ENST00000534839 PCF11O94913 1555 aaKnown RBP18.96■□□□□ 0.63
TNC-209ENST00000534839 RUSC2Q8N2Y8 1516 aa18.95■□□□□ 0.62
TNC-209ENST00000534839 PTPRMP28827 1452 aa18.95■□□□□ 0.62
TNC-209ENST00000534839 PLB1Q6P1J6 1458 aa18.95■□□□□ 0.62
TNC-209ENST00000534839 TEX14Q8IWB6 1497 aa18.93■□□□□ 0.62
TNC-209ENST00000534839 MAP3K4Q9Y6R4 1608 aa18.92■□□□□ 0.62
TNC-209ENST00000534839 KIF21BO75037 1637 aa18.91■□□□□ 0.62
TNC-209ENST00000534839 ABCC2Q92887 1545 aa18.89■□□□□ 0.61
TNC-209ENST00000534839 EPRSP07814 1512 aaKnown RBP18.86■□□□□ 0.61
TNC-209ENST00000534839 ERICH3Q5RHP9 1530 aa18.85■□□□□ 0.61
TNC-209ENST00000534839 HSPA2P54652 639 aa18.84■□□□□ 0.61
TNC-209ENST00000534839 ADAMTSL3P82987 1691 aa18.82■□□□□ 0.6
TNC-209ENST00000534839 PTPRGP23470 1445 aa18.82■□□□□ 0.6
TNC-209ENST00000534839 TTBK1Q5TCY1 1321 aaPredicted RBP18.81■□□□□ 0.6
TNC-209ENST00000534839 CUL7Q14999 1698 aa18.81■□□□□ 0.6
TNC-209ENST00000534839 WRNQ14191 1432 aaPredicted RBP eCLIP18.78■□□□□ 0.6
TNC-209ENST00000534839 KIAA0586Q9BVV6 1533 aa18.75■□□□□ 0.59
TNC-209ENST00000534839 MADDQ8WXG6 1647 aa18.69■□□□□ 0.58
TNC-209ENST00000534839 UHRF1BP1LA0JNW5 1464 aa18.69■□□□□ 0.58
TNC-209ENST00000534839 TNIKQ9UKE5 1360 aa18.66■□□□□ 0.58
TNC-209ENST00000534839 BCORL1Q5H9F3 1711 aa18.63■□□□□ 0.57
TNC-209ENST00000534839 MAGI3Q5TCQ9 1506 aa18.63■□□□□ 0.57
TNC-209ENST00000534839 KDM5BQ9UGL1 1544 aa18.63■□□□□ 0.57
TNC-209ENST00000534839 UACAQ9BZF9 1416 aa18.62■□□□□ 0.57
TNC-209ENST00000534839 CD109Q6YHK3 1445 aa18.6■□□□□ 0.57
TNC-209ENST00000534839 ZCCHC11Q5TAX3 1644 aaKnown RBP18.59■□□□□ 0.57
TNC-209ENST00000534839 RIMS1Q86UR5 1692 aaKnown RBP18.57■□□□□ 0.56
TNC-209ENST00000534839 CARMIL2Q6F5E8 1435 aa18.55■□□□□ 0.56
TNC-209ENST00000534839 WDR7Q9Y4E6 1490 aa18.54■□□□□ 0.56
TNC-209ENST00000534839 ARID4BQ4LE39 1312 aaPredicted RBP18.53■□□□□ 0.56
TNC-209ENST00000534839 BIVM-ERCC5R4GMW8 1640 aa18.53■□□□□ 0.56
TNC-209ENST00000534839 RBM42Q9BTD8 480 aaKnown RBP18.53■□□□□ 0.56
TNC-209ENST00000534839 CFAP43Q8NDM7 1665 aa18.53■□□□□ 0.56
TNC-209ENST00000534839 SPDYE2BA6NHP3 402 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms