RNA–Protein interactions for RNA: ENST00000534657.5

LMO7-226, Transcript of LIM domain 7, humanhuman

TSL 4

Gene LMO7, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-226ENST00000534657 TOPBP1Q92547 1522 aa13.96□□□□□ -0.17
LMO7-226ENST00000534657 ABCA10Q8WWZ4 1543 aa13.95□□□□□ -0.18
LMO7-226ENST00000534657 CLIP1P30622 1438 aa13.95□□□□□ -0.18
LMO7-226ENST00000534657 NESP48681 1621 aa13.94□□□□□ -0.18
LMO7-226ENST00000534657 SAMD1Q6SPF0 538 aaPredicted RBP13.94□□□□□ -0.18
LMO7-226ENST00000534657 UBTFP17480 764 aaKnown RBP13.93□□□□□ -0.18
LMO7-226ENST00000534657 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
LMO7-226ENST00000534657 CUX2O14529 1486 aa13.93□□□□□ -0.18
LMO7-226ENST00000534657 VPS8Q8N3P4 1428 aa13.92□□□□□ -0.18
LMO7-226ENST00000534657 POLA1P09884 1462 aaPredicted RBP13.92□□□□□ -0.18
LMO7-226ENST00000534657 PDS5BQ9NTI5 1447 aa13.91□□□□□ -0.18
LMO7-226ENST00000534657 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
LMO7-226ENST00000534657 IGF1RP08069 1367 aa13.91□□□□□ -0.18
LMO7-226ENST00000534657 APLP2Q06481 763 aa13.9□□□□□ -0.18
LMO7-226ENST00000534657 URB2Q14146 1524 aaKnown RBP13.89□□□□□ -0.19
LMO7-226ENST00000534657 TRHP20396 242 aaPredicted RBP13.87□□□□□ -0.19
LMO7-226ENST00000534657 CUL7Q14999 1698 aa13.85□□□□□ -0.19
LMO7-226ENST00000534657 ARAP1Q96P48 1450 aa13.84□□□□□ -0.19
LMO7-226ENST00000534657 KIF21AQ7Z4S6 1674 aa13.84□□□□□ -0.19
LMO7-226ENST00000534657 ABCA5Q8WWZ7 1642 aa13.83□□□□□ -0.2
LMO7-226ENST00000534657 CARMIL1Q5VZK9 1371 aa13.82□□□□□ -0.2
LMO7-226ENST00000534657 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
LMO7-226ENST00000534657 ARHGAP35Q9NRY4 1499 aa13.78□□□□□ -0.2
LMO7-226ENST00000534657 TARBP1Q13395 1621 aaKnown RBP13.78□□□□□ -0.2
LMO7-226ENST00000534657 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
LMO7-226ENST00000534657 DSG3P32926 999 aa13.76□□□□□ -0.21
LMO7-226ENST00000534657 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
LMO7-226ENST00000534657 MRC2Q9UBG0 1479 aa13.74□□□□□ -0.21
LMO7-226ENST00000534657 ZEB1P37275 1124 aaPredicted RBP13.74□□□□□ -0.21
LMO7-226ENST00000534657 WDR62O43379 1518 aa13.72□□□□□ -0.21
LMO7-226ENST00000534657 EFCAB5A4FU69 1503 aa13.71□□□□□ -0.21
LMO7-226ENST00000534657 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.21
LMO7-226ENST00000534657 CTTNBP2Q8WZ74 1663 aa13.7□□□□□ -0.22
LMO7-226ENST00000534657 ABCB7O75027 752 aa13.7□□□□□ -0.22
LMO7-226ENST00000534657 GAPVD1Q14C86 1478 aa13.69□□□□□ -0.22
LMO7-226ENST00000534657 PBRM1Q86U86 1689 aa13.64□□□□□ -0.23
LMO7-226ENST00000534657 AQRO60306 1485 aaKnown RBP eCLIP13.64□□□□□ -0.236e-8■□□□□ 9.3
LMO7-226ENST00000534657 IFT140Q96RY7 1462 aa13.63□□□□□ -0.23
LMO7-226ENST00000534657 FHAD1B1AJZ9 1412 aa13.63□□□□□ -0.23
LMO7-226ENST00000534657 SAMD9Q5K651 1589 aa13.62□□□□□ -0.23
LMO7-226ENST00000534657 PPARGC1BQ86YN6 1023 aaKnown RBP13.62□□□□□ -0.23
LMO7-226ENST00000534657 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
LMO7-226ENST00000534657 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
LMO7-226ENST00000534657 CFAP43Q8NDM7 1665 aa13.6□□□□□ -0.23
LMO7-226ENST00000534657 TIAM1Q13009 1591 aa13.6□□□□□ -0.23
LMO7-226ENST00000534657 TDRD9Q8NDG6 1382 aaKnown RBP13.59□□□□□ -0.23
LMO7-226ENST00000534657 RRBP1Q9P2E9 1410 aaKnown RBP13.59□□□□□ -0.23
LMO7-226ENST00000534657 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
LMO7-226ENST00000534657 GRIN2BQ13224 1484 aa13.57□□□□□ -0.24
LMO7-226ENST00000534657 FYCO1Q9BQS8 1478 aa13.57□□□□□ -0.24
LMO7-226ENST00000534657 POLA2Q14181 598 aa13.56□□□□□ -0.24
LMO7-226ENST00000534657 PCF11O94913 1555 aaKnown RBP13.55□□□□□ -0.24
LMO7-226ENST00000534657 CASKIN1Q8WXD9 1431 aa13.55□□□□□ -0.24
LMO7-226ENST00000534657 FMN1Q68DA7 1419 aa13.52□□□□□ -0.25
LMO7-226ENST00000534657 SNAPC4Q5SXM2 1469 aa13.52□□□□□ -0.25
LMO7-226ENST00000534657 LRRC9Q6ZRR7 1453 aa13.52□□□□□ -0.25
LMO7-226ENST00000534657 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
LMO7-226ENST00000534657 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
LMO7-226ENST00000534657 UGGT2Q9NYU1 1516 aa13.49□□□□□ -0.25
LMO7-226ENST00000534657 FHOD3Q2V2M9 1422 aa13.48□□□□□ -0.25
LMO7-226ENST00000534657 IQGAP2Q13576 1575 aa13.48□□□□□ -0.25
LMO7-226ENST00000534657 ZNF608Q9ULD9 1512 aaPredicted RBP13.47□□□□□ -0.25
LMO7-226ENST00000534657 MAGI1Q96QZ7 1491 aaPredicted RBP13.47□□□□□ -0.25
LMO7-226ENST00000534657 RANGAP1P46060 587 aaPredicted RBP13.46□□□□□ -0.25
LMO7-226ENST00000534657 ERCC6Q03468 1493 aa13.46□□□□□ -0.25
LMO7-226ENST00000534657 CCNB3Q8WWL7 1395 aa13.44□□□□□ -0.26
LMO7-226ENST00000534657 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.44□□□□□ -0.26
LMO7-226ENST00000534657 KIAA0586Q9BVV6 1533 aa13.43□□□□□ -0.26
LMO7-226ENST00000534657 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
LMO7-226ENST00000534657 TTBK1Q5TCY1 1321 aaPredicted RBP13.41□□□□□ -0.26
LMO7-226ENST00000534657 LRRIQ1Q96JM4 1722 aa13.41□□□□□ -0.26
LMO7-226ENST00000534657 CCER1Q8TC90 406 aaPredicted RBP13.4□□□□□ -0.26
LMO7-226ENST00000534657 CLSPNQ9HAW4 1339 aa13.39□□□□□ -0.27
LMO7-226ENST00000534657 SYNJ2O15056 1496 aa13.38□□□□□ -0.27
LMO7-226ENST00000534657 CCDC18Q5T9S5 1454 aa13.38□□□□□ -0.27
LMO7-226ENST00000534657 ARHGEF11O15085 1522 aa13.38□□□□□ -0.27
LMO7-226ENST00000534657 HECW1Q76N89 1606 aa13.37□□□□□ -0.27
LMO7-226ENST00000534657 EHBP1L1Q8N3D4 1523 aa13.37□□□□□ -0.27
LMO7-226ENST00000534657 KIAA0556O60303 1618 aa13.36□□□□□ -0.27
LMO7-226ENST00000534657 PHLDB1Q86UU1 1377 aa13.36□□□□□ -0.27
LMO7-226ENST00000534657 NUP160Q12769 1436 aa13.36□□□□□ -0.27
LMO7-226ENST00000534657 DISP1Q96F81 1524 aa13.34□□□□□ -0.27
LMO7-226ENST00000534657 CEP170Q5SW79 1584 aa13.32□□□□□ -0.28
LMO7-226ENST00000534657 SUPT6HQ7KZ85 1726 aaKnown RBP13.31□□□□□ -0.28
LMO7-226ENST00000534657 P3H3Q8IVL6 736 aa13.3□□□□□ -0.28
LMO7-226ENST00000534657 DHX57Q6P158 1386 aaKnown RBP13.3□□□□□ -0.28
LMO7-226ENST00000534657 FGD6Q6ZV73 1430 aa13.29□□□□□ -0.28
LMO7-226ENST00000534657 EPRSP07814 1512 aaKnown RBP13.29□□□□□ -0.28
LMO7-226ENST00000534657 NCOA2Q15596 1464 aa13.27□□□□□ -0.29
LMO7-226ENST00000534657 MAGI3Q5TCQ9 1506 aa13.27□□□□□ -0.29
LMO7-226ENST00000534657 TCOF1Q13428 1488 aaKnown RBP13.26□□□□□ -0.29
LMO7-226ENST00000534657 MYOM3Q5VTT5 1437 aa13.25□□□□□ -0.29
LMO7-226ENST00000534657 MTUS2Q5JR59 1369 aa13.25□□□□□ -0.29
LMO7-226ENST00000534657 RAPGEF6Q8TEU7 1601 aa13.24□□□□□ -0.29
LMO7-226ENST00000534657 ZBTB12Q9Y330 459 aaPredicted RBP13.24□□□□□ -0.29
LMO7-226ENST00000534657 SETD5Q9C0A6 1442 aa13.22□□□□□ -0.29
LMO7-226ENST00000534657 NUP153P49790 1475 aaKnown RBP13.22□□□□□ -0.29
LMO7-226ENST00000534657 MIA2Q96PC5 1412 aa13.21□□□□□ -0.3
LMO7-226ENST00000534657 AKNAQ7Z591 1439 aa13.2□□□□□ -0.3
LMO7-226ENST00000534657 RAB3GAP2Q9H2M9 1393 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms