RNA–Protein interactions for RNA: ENST00000533907.1

RRP8-204, Transcript of ribosomal RNA processing 8, humanhuman

TSL 5

Gene RRP8, Length 1,989 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-204ENST00000533907 RAB3GAP2Q9H2M9 1393 aa21.73■■□□□ 1.07
RRP8-204ENST00000533907 TIAM1Q13009 1591 aa21.72■■□□□ 1.07
RRP8-204ENST00000533907 LAMC3Q9Y6N6 1575 aa21.71■■□□□ 1.07
RRP8-204ENST00000533907 SETD5Q9C0A6 1442 aa21.65■■□□□ 1.06
RRP8-204ENST00000533907 WDR97A6NE52 1622 aa21.65■■□□□ 1.06
RRP8-204ENST00000533907 CARMIL1Q5VZK9 1371 aa21.65■■□□□ 1.06
RRP8-204ENST00000533907 TOPBP1Q92547 1522 aa21.64■■□□□ 1.05
RRP8-204ENST00000533907 KCNH8Q96L42 1107 aa21.63■■□□□ 1.05
RRP8-204ENST00000533907 ABCA10Q8WWZ4 1543 aa21.63■■□□□ 1.05
RRP8-204ENST00000533907 CFAP43Q8NDM7 1665 aa21.62■■□□□ 1.05
RRP8-204ENST00000533907 NESP48681 1621 aa21.59■■□□□ 1.05
RRP8-204ENST00000533907 ITGAEP38570 1179 aa21.59■■□□□ 1.05
RRP8-204ENST00000533907 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.05
RRP8-204ENST00000533907 FKBP8Q14318 412 aa21.57■■□□□ 1.04
RRP8-204ENST00000533907 LRRC9Q6ZRR7 1453 aa21.57■■□□□ 1.04
RRP8-204ENST00000533907 TIMELESSQ9UNS1 1208 aa21.56■■□□□ 1.04
RRP8-204ENST00000533907 PDS5BQ9NTI5 1447 aa21.56■■□□□ 1.04
RRP8-204ENST00000533907 NEFLP07196 543 aa21.54■■□□□ 1.04
RRP8-204ENST00000533907 BCANQ96GW7 911 aa21.54■■□□□ 1.04
RRP8-204ENST00000533907 CCER2I3L3R5 266 aa21.53■■□□□ 1.04
RRP8-204ENST00000533907 PPP1R15AO75807 674 aaPredicted RBP21.52■■□□□ 1.04
RRP8-204ENST00000533907 DDX10Q13206 875 aaKnown RBP21.51■■□□□ 1.03
RRP8-204ENST00000533907 RAD54L2Q9Y4B4 1467 aa21.5■■□□□ 1.03
RRP8-204ENST00000533907 CUL7Q14999 1698 aa21.49■■□□□ 1.03
RRP8-204ENST00000533907 PHLDB1Q86UU1 1377 aa21.48■■□□□ 1.03
RRP8-204ENST00000533907 URB2Q14146 1524 aaKnown RBP21.48■■□□□ 1.03
RRP8-204ENST00000533907 FHAD1B1AJZ9 1412 aa21.47■■□□□ 1.03
RRP8-204ENST00000533907 PCF11O94913 1555 aaKnown RBP21.46■■□□□ 1.03
RRP8-204ENST00000533907 BCL11AQ9H165 835 aa21.43■■□□□ 1.02
RRP8-204ENST00000533907 RBM19Q9Y4C8 960 aaKnown RBP21.43■■□□□ 1.02
RRP8-204ENST00000533907 SIN3AQ96ST3 1273 aa21.42■■□□□ 1.02
RRP8-204ENST00000533907 ANP32CO43423 234 aa21.41■■□□□ 1.02
RRP8-204ENST00000533907 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.4■■□□□ 1.02
RRP8-204ENST00000533907 EFCAB5A4FU69 1503 aa21.38■■□□□ 1.01
RRP8-204ENST00000533907 FAM50AQ14320 339 aaKnown RBP21.36■■□□□ 1.01
RRP8-204ENST00000533907 ABCA5Q8WWZ7 1642 aa21.36■■□□□ 1.01
RRP8-204ENST00000533907 FYCO1Q9BQS8 1478 aa21.35■■□□□ 1.01
RRP8-204ENST00000533907 GAPVD1Q14C86 1478 aa21.32■■□□□ 1
RRP8-204ENST00000533907 TRIM52Q96A61 297 aa21.32■■□□□ 1
RRP8-204ENST00000533907 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
RRP8-204ENST00000533907 CTTNBP2Q8WZ74 1663 aa21.3■■□□□ 1
RRP8-204ENST00000533907 AQRO60306 1485 aaKnown RBP eCLIP21.3■■□□□ 12e-6■■■■□ 24.6
RRP8-204ENST00000533907 DNAJC5BQ9UF47 199 aa21.28■■□□□ 1
RRP8-204ENST00000533907 TONSLQ96HA7 1378 aa21.27■■□□□ 1
RRP8-204ENST00000533907 CASKIN1Q8WXD9 1431 aa21.26■□□□□ 0.99
RRP8-204ENST00000533907 TDRD9Q8NDG6 1382 aaKnown RBP21.25■□□□□ 0.99
RRP8-204ENST00000533907 CCDC18Q5T9S5 1454 aa21.25■□□□□ 0.99
RRP8-204ENST00000533907 TARBP1Q13395 1621 aaKnown RBP21.24■□□□□ 0.99
RRP8-204ENST00000533907 PTPN23Q9H3S7 1636 aa21.23■□□□□ 0.99
RRP8-204ENST00000533907 UACAQ9BZF9 1416 aa21.22■□□□□ 0.99
RRP8-204ENST00000533907 FANCIQ9NVI1 1328 aa21.22■□□□□ 0.99
RRP8-204ENST00000533907 HIRIP3Q9BW71 556 aaPredicted RBP21.22■□□□□ 0.99
RRP8-204ENST00000533907 FGD6Q6ZV73 1430 aa21.22■□□□□ 0.99
RRP8-204ENST00000533907 MRC2Q9UBG0 1479 aa21.21■□□□□ 0.99
RRP8-204ENST00000533907 FMN1Q68DA7 1419 aa21.21■□□□□ 0.99
RRP8-204ENST00000533907 HFM1A2PYH4 1435 aa21.2■□□□□ 0.98
RRP8-204ENST00000533907 FHOD3Q2V2M9 1422 aa21.19■□□□□ 0.98
RRP8-204ENST00000533907 KDM5BQ9UGL1 1544 aa21.15■□□□□ 0.98
RRP8-204ENST00000533907 MSH5O43196 834 aa21.15■□□□□ 0.98
RRP8-204ENST00000533907 SAMD9Q5K651 1589 aa21.14■□□□□ 0.98
RRP8-204ENST00000533907 ERICH6BQ5W0A0 696 aa21.14■□□□□ 0.97
RRP8-204ENST00000533907 CDK11AQ9UQ88 783 aaPredicted RBP21.13■□□□□ 0.97
RRP8-204ENST00000533907 P3H3Q8IVL6 736 aa21.12■□□□□ 0.97
RRP8-204ENST00000533907 SNAPC4Q5SXM2 1469 aa21.1■□□□□ 0.97
RRP8-204ENST00000533907 HNRNPUQ00839 825 aaKnown RBP eCLIP21.09■□□□□ 0.97
RRP8-204ENST00000533907 ATP1B4Q9UN42 357 aaPredicted RBP21.08■□□□□ 0.97
RRP8-204ENST00000533907 PBRM1Q86U86 1689 aa21.08■□□□□ 0.97
RRP8-204ENST00000533907 NAIPQ13075 1403 aa21.07■□□□□ 0.96
RRP8-204ENST00000533907 NCOA2Q15596 1464 aa21.07■□□□□ 0.96
RRP8-204ENST00000533907 HECW1Q76N89 1606 aa21.07■□□□□ 0.96
RRP8-204ENST00000533907 THOC2Q8NI27 1593 aaKnown RBP21.07■□□□□ 0.96
RRP8-204ENST00000533907 IFT140Q96RY7 1462 aa21.07■□□□□ 0.96
RRP8-204ENST00000533907 WDR62O43379 1518 aa21.07■□□□□ 0.96
RRP8-204ENST00000533907 SUPT6HQ7KZ85 1726 aaKnown RBP21.06■□□□□ 0.96
RRP8-204ENST00000533907 LRRIQ1Q96JM4 1722 aa21.06■□□□□ 0.96
RRP8-204ENST00000533907 GRIN2BQ13224 1484 aa21.06■□□□□ 0.96
RRP8-204ENST00000533907 PTPRKQ15262 1439 aa21.06■□□□□ 0.96
RRP8-204ENST00000533907 GCC2Q8IWJ2 1684 aa21.06■□□□□ 0.96
RRP8-204ENST00000533907 ERICH6Q7L0X2 663 aa21.05■□□□□ 0.96
RRP8-204ENST00000533907 ADAMTS12P58397 1594 aa21.03■□□□□ 0.96
RRP8-204ENST00000533907 MYOM3Q5VTT5 1437 aa21.03■□□□□ 0.96
RRP8-204ENST00000533907 MTUS2Q5JR59 1369 aa21.03■□□□□ 0.96
RRP8-204ENST00000533907 EHBP1L1Q8N3D4 1523 aa21.02■□□□□ 0.96
RRP8-204ENST00000533907 MYT1LQ9UL68 1186 aa21.01■□□□□ 0.95
RRP8-204ENST00000533907 CNTLNQ9NXG0 1405 aa21.01■□□□□ 0.95
RRP8-204ENST00000533907 PPP4R2Q9NY27 417 aa21■□□□□ 0.95
RRP8-204ENST00000533907 WASHC2AQ641Q2 1341 aa20.97■□□□□ 0.95
RRP8-204ENST00000533907 IQGAP2Q13576 1575 aa20.97■□□□□ 0.95
RRP8-204ENST00000533907 IRX6P78412 446 aaPredicted RBP20.96■□□□□ 0.95
RRP8-204ENST00000533907 POLR1AO95602 1720 aaPredicted RBP20.94■□□□□ 0.94
RRP8-204ENST00000533907 UGGT2Q9NYU1 1516 aa20.94■□□□□ 0.94
RRP8-204ENST00000533907 AKNAQ7Z591 1439 aa20.94■□□□□ 0.94
RRP8-204ENST00000533907 HSPA5P11021 654 aaKnown RBP20.94■□□□□ 0.94
RRP8-204ENST00000533907 ARHGEF11O15085 1522 aa20.93■□□□□ 0.94
RRP8-204ENST00000533907 TCOF1Q13428 1488 aaKnown RBP20.91■□□□□ 0.94
RRP8-204ENST00000533907 EIF4G2P78344 907 aaKnown RBP eCLIP20.89■□□□□ 0.93
RRP8-204ENST00000533907 DENND4BO75064 1496 aaPredicted RBP20.88■□□□□ 0.93
RRP8-204ENST00000533907 NCOA1Q15788 1441 aa20.88■□□□□ 0.93
RRP8-204ENST00000533907 ZBED9Q6R2W3 1325 aa20.87■□□□□ 0.93
RRP8-204ENST00000533907 ZNF608Q9ULD9 1512 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms