RNA–Protein interactions for RNA: ENST00000533907.1

RRP8-204, Transcript of ribosomal RNA processing 8, humanhuman

TSL 5

Gene RRP8, Length 1,989 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8-204ENST00000533907 NISCHQ9Y2I1 1504 aa30.66■■■□□ 2.5
RRP8-204ENST00000533907 CCDC180Q9P1Z9 1646 aa26.42■■□□□ 1.82
RRP8-204ENST00000533907 ZCCHC6Q5VYS8 1495 aaKnown RBP25.88■■□□□ 1.73
RRP8-204ENST00000533907 SHROOM4Q9ULL8 1493 aa25.86■■□□□ 1.73
RRP8-204ENST00000533907 SUPT5HO00267 1087 aaKnown RBP25.58■■□□□ 1.69
RRP8-204ENST00000533907 HRCP23327 699 aa25.45■■□□□ 1.66
RRP8-204ENST00000533907 DCAF1Q9Y4B6 1507 aa25.39■■□□□ 1.66
RRP8-204ENST00000533907 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
RRP8-204ENST00000533907 CHIC1Q5VXU3 224 aa25.22■■□□□ 1.63
RRP8-204ENST00000533907 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
RRP8-204ENST00000533907 PCGF6Q9BYE7 350 aa24.94■■□□□ 1.58
RRP8-204ENST00000533907 PPARGC1BQ86YN6 1023 aaKnown RBP24.68■■□□□ 1.54
RRP8-204ENST00000533907 NACADO15069 1562 aa24.49■■□□□ 1.51
RRP8-204ENST00000533907 TRIM26Q12899 539 aaPredicted RBP24.44■■□□□ 1.5
RRP8-204ENST00000533907 LOC105371045A0A1W2PR82 267 aa24.4■■□□□ 1.5
RRP8-204ENST00000533907 ABCC9O60706 1549 aa24.37■■□□□ 1.49
RRP8-204ENST00000533907 SCRIBQ14160 1630 aa24.34■■□□□ 1.49
RRP8-204ENST00000533907 ZEB1P37275 1124 aaPredicted RBP24.24■■□□□ 1.47
RRP8-204ENST00000533907 PELP1Q8IZL8 1130 aaKnown RBP24.14■■□□□ 1.45
RRP8-204ENST00000533907 RB1CC1Q8TDY2 1594 aa24.11■■□□□ 1.45
RRP8-204ENST00000533907 RSF1Q96T23 1441 aaPredicted RBP24.05■■□□□ 1.44
RRP8-204ENST00000533907 TRIM41Q8WV44 630 aa23.85■■□□□ 1.41
RRP8-204ENST00000533907 SCAF1Q9H7N4 1312 aaKnown RBP23.75■■□□□ 1.39
RRP8-204ENST00000533907 CECR2Q9BXF3 1484 aa23.74■■□□□ 1.39
RRP8-204ENST00000533907 MROH2BQ7Z745 1585 aa23.68■■□□□ 1.38
RRP8-204ENST00000533907 BAZ1AQ9NRL2 1556 aaPredicted RBP23.64■■□□□ 1.37
RRP8-204ENST00000533907 FAM9AQ8IZU1 332 aaPredicted RBP23.59■■□□□ 1.37
RRP8-204ENST00000533907 UNC13AQ9UPW8 1703 aa23.55■■□□□ 1.36
RRP8-204ENST00000533907 WIZO95785 1651 aa23.5■■□□□ 1.35
RRP8-204ENST00000533907 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
RRP8-204ENST00000533907 ACIN1Q9UKV3 1341 aaKnown RBP23.38■■□□□ 1.33
RRP8-204ENST00000533907 EIF4G1Q04637 1599 aaKnown RBP23.37■■□□□ 1.33
RRP8-204ENST00000533907 BICRAQ9NZM4 1560 aa23.33■■□□□ 1.33
RRP8-204ENST00000533907 TOP2AP11388 1531 aaKnown RBP23.32■■□□□ 1.32
RRP8-204ENST00000533907 EHMT2Q96KQ7 1210 aa23.31■■□□□ 1.32
RRP8-204ENST00000533907 CCER1Q8TC90 406 aaPredicted RBP23.29■■□□□ 1.32
RRP8-204ENST00000533907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.25■■□□□ 1.31
RRP8-204ENST00000533907 NEUROD1Q13562 356 aa23.23■■□□□ 1.31
RRP8-204ENST00000533907 WRNQ14191 1432 aaPredicted RBP eCLIP23.22■■□□□ 1.31
RRP8-204ENST00000533907 CENPBP07199 599 aaPredicted RBP23.21■■□□□ 1.31
RRP8-204ENST00000533907 MYT1Q01538 1121 aa23.16■■□□□ 1.3
RRP8-204ENST00000533907 DIEXFQ68CQ4 756 aaKnown RBP23.16■■□□□ 1.3
RRP8-204ENST00000533907 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.29
RRP8-204ENST00000533907 PEG3Q9GZU2 1588 aa23.13■■□□□ 1.29
RRP8-204ENST00000533907 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
RRP8-204ENST00000533907 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
RRP8-204ENST00000533907 GTF3C3Q9Y5Q9 886 aa23.07■■□□□ 1.28
RRP8-204ENST00000533907 CEP162Q5TB80 1403 aa23.03■■□□□ 1.28
RRP8-204ENST00000533907 ABCC8Q09428 1581 aa22.96■■□□□ 1.27
RRP8-204ENST00000533907 TNIKQ9UKE5 1360 aa22.96■■□□□ 1.27
RRP8-204ENST00000533907 EEA1Q15075 1411 aa22.94■■□□□ 1.26
RRP8-204ENST00000533907 ATAD2BQ9ULI0 1458 aa22.89■■□□□ 1.25
RRP8-204ENST00000533907 ZNF316A6NFI3 1004 aaPredicted RBP22.87■■□□□ 1.25
RRP8-204ENST00000533907 SOGA1O94964 1423 aa22.8■■□□□ 1.24
RRP8-204ENST00000533907 BAZ1BQ9UIG0 1483 aaKnown RBP22.8■■□□□ 1.24
RRP8-204ENST00000533907 GOLGA3Q08378 1498 aa22.77■■□□□ 1.24
RRP8-204ENST00000533907 TTBK1Q5TCY1 1321 aaPredicted RBP22.75■■□□□ 1.23
RRP8-204ENST00000533907 CSRNP3Q8WYN3 585 aa22.7■■□□□ 1.22
RRP8-204ENST00000533907 KIF21BO75037 1637 aa22.65■■□□□ 1.22
RRP8-204ENST00000533907 RUSC2Q8N2Y8 1516 aa22.64■■□□□ 1.22
RRP8-204ENST00000533907 UBTFP17480 764 aaKnown RBP22.62■■□□□ 1.21
RRP8-204ENST00000533907 NCAPD3P42695 1498 aa22.61■■□□□ 1.21
RRP8-204ENST00000533907 HMGXB3Q12766 1538 aa22.61■■□□□ 1.21
RRP8-204ENST00000533907 CEP164Q9UPV0 1460 aa22.58■■□□□ 1.21
RRP8-204ENST00000533907 YTHDC1Q96MU7 727 aaKnown RBP22.57■■□□□ 1.2
RRP8-204ENST00000533907 MIER1Q8N108 512 aa22.54■■□□□ 1.2
RRP8-204ENST00000533907 VPS8Q8N3P4 1428 aa22.49■■□□□ 1.19
RRP8-204ENST00000533907 CLIP1P30622 1438 aa22.48■■□□□ 1.19
RRP8-204ENST00000533907 SYNJ1O43426 1573 aa22.45■■□□□ 1.18
RRP8-204ENST00000533907 HNRNPUL2Q1KMD3 747 aaKnown RBP22.43■■□□□ 1.18
RRP8-204ENST00000533907 CLSPNQ9HAW4 1339 aa22.43■■□□□ 1.18
RRP8-204ENST00000533907 TOP2BQ02880 1626 aa22.34■■□□□ 1.17
RRP8-204ENST00000533907 APLP2Q06481 763 aa22.3■■□□□ 1.16
RRP8-204ENST00000533907 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
RRP8-204ENST00000533907 CFTRP13569 1480 aa22.28■■□□□ 1.16
RRP8-204ENST00000533907 RAPGEF2Q9Y4G8 1499 aa22.26■■□□□ 1.15
RRP8-204ENST00000533907 DHX57Q6P158 1386 aaKnown RBP22.2■■□□□ 1.14
RRP8-204ENST00000533907 ERICH3Q5RHP9 1530 aa22.17■■□□□ 1.14
RRP8-204ENST00000533907 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
RRP8-204ENST00000533907 SUPT16HQ9Y5B9 1047 aaKnown RBP22.13■■□□□ 1.13
RRP8-204ENST00000533907 CUX1P39880 1505 aa22.11■■□□□ 1.13
RRP8-204ENST00000533907 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
RRP8-204ENST00000533907 CUX2O14529 1486 aa22.08■■□□□ 1.13
RRP8-204ENST00000533907 CC2D2AQ9P2K1 1620 aa22.08■■□□□ 1.13
RRP8-204ENST00000533907 CADPSQ9ULU8 1353 aa22.08■■□□□ 1.12
RRP8-204ENST00000533907 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
RRP8-204ENST00000533907 PRXQ9BXM0 1461 aa22.02■■□□□ 1.12
RRP8-204ENST00000533907 KIF27Q86VH2 1401 aa22.02■■□□□ 1.12
RRP8-204ENST00000533907 RANGAP1P46060 587 aaPredicted RBP21.92■■□□□ 1.1
RRP8-204ENST00000533907 TSHZ2Q9NRE2 1034 aa21.92■■□□□ 1.1
RRP8-204ENST00000533907 KANK4Q5T7N3 995 aaPredicted RBP21.88■■□□□ 1.09
RRP8-204ENST00000533907 CCNB3Q8WWL7 1395 aa21.87■■□□□ 1.09
RRP8-204ENST00000533907 ANP32EQ9BTT0 268 aa21.83■■□□□ 1.08
RRP8-204ENST00000533907 MAPKBP1O60336 1514 aa21.81■■□□□ 1.08
RRP8-204ENST00000533907 FANCD2Q9BXW9 1451 aa21.81■■□□□ 1.08
RRP8-204ENST00000533907 ARHGAP35Q9NRY4 1499 aa21.78■■□□□ 1.08
RRP8-204ENST00000533907 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
RRP8-204ENST00000533907 MAP3K1Q13233 1512 aa21.76■■□□□ 1.07
RRP8-204ENST00000533907 IGF1RP08069 1367 aa21.74■■□□□ 1.07
RRP8-204ENST00000533907 DNMBPQ6XZF7 1577 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms