RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 SYNJ1O43426 1573 aa16.47■□□□□ 0.23
BEST3-207ENST00000533674 MAGI1Q96QZ7 1491 aaPredicted RBP16.45■□□□□ 0.22
BEST3-207ENST00000533674 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
BEST3-207ENST00000533674 GRIN2BQ13224 1484 aa16.43■□□□□ 0.22
BEST3-207ENST00000533674 CUX1P39880 1505 aa16.43■□□□□ 0.22
BEST3-207ENST00000533674 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
BEST3-207ENST00000533674 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
BEST3-207ENST00000533674 SYNJ2O15056 1496 aa16.4■□□□□ 0.22
BEST3-207ENST00000533674 PBRM1Q86U86 1689 aa16.39■□□□□ 0.21
BEST3-207ENST00000533674 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
BEST3-207ENST00000533674 GAPVD1Q14C86 1478 aa16.35■□□□□ 0.21
BEST3-207ENST00000533674 ABCA5Q8WWZ7 1642 aa16.28■□□□□ 0.2
BEST3-207ENST00000533674 ABCA10Q8WWZ4 1543 aa16.28■□□□□ 0.2
BEST3-207ENST00000533674 SUPT5HO00267 1087 aaKnown RBP16.24■□□□□ 0.19
BEST3-207ENST00000533674 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
BEST3-207ENST00000533674 WRNQ14191 1432 aaPredicted RBP eCLIP16.21■□□□□ 0.19
BEST3-207ENST00000533674 ADAMTS12P58397 1594 aa16.19■□□□□ 0.18
BEST3-207ENST00000533674 CEP170Q5SW79 1584 aa16.16■□□□□ 0.18
BEST3-207ENST00000533674 ERCC6L2Q5T890 1561 aa16.16■□□□□ 0.18
BEST3-207ENST00000533674 BIVM-ERCC5R4GMW8 1640 aa16.15■□□□□ 0.18
BEST3-207ENST00000533674 TOP2BQ02880 1626 aa16.14■□□□□ 0.17
BEST3-207ENST00000533674 FHAD1B1AJZ9 1412 aa16.12■□□□□ 0.17
BEST3-207ENST00000533674 NUP160Q12769 1436 aa16.12■□□□□ 0.17
BEST3-207ENST00000533674 SHROOM2Q13796 1616 aa16.09■□□□□ 0.17
BEST3-207ENST00000533674 ERICH3Q5RHP9 1530 aa16.09■□□□□ 0.17
BEST3-207ENST00000533674 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.05■□□□□ 0.16
BEST3-207ENST00000533674 HNRNPUL2Q1KMD3 747 aaKnown RBP16.05■□□□□ 0.16
BEST3-207ENST00000533674 PRG4Q92954 1404 aaPredicted RBP16.04■□□□□ 0.16
BEST3-207ENST00000533674 FOXD4L1Q9NU39 408 aa16.04■□□□□ 0.16
BEST3-207ENST00000533674 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
BEST3-207ENST00000533674 SPINK5Q9NQ38 1064 aaPredicted RBP16.01■□□□□ 0.15
BEST3-207ENST00000533674 KIF13AQ9H1H9 1805 aa15.99■□□□□ 0.15
BEST3-207ENST00000533674 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
BEST3-207ENST00000533674 APLP2Q06481 763 aa15.98■□□□□ 0.15
BEST3-207ENST00000533674 SAMD1Q6SPF0 538 aaPredicted RBP15.98■□□□□ 0.15
BEST3-207ENST00000533674 JPH4Q96JJ6 628 aa15.98■□□□□ 0.15
BEST3-207ENST00000533674 RUSC2Q8N2Y8 1516 aa15.97■□□□□ 0.15
BEST3-207ENST00000533674 CAPN15O75808 1086 aa15.96■□□□□ 0.15
BEST3-207ENST00000533674 FAM69CQ0P6D2 419 aa15.92■□□□□ 0.14
BEST3-207ENST00000533674 ZBTB22O15209 634 aa15.91■□□□□ 0.14
BEST3-207ENST00000533674 ABCC10Q5T3U5 1492 aa15.89■□□□□ 0.13
BEST3-207ENST00000533674 MAPKBP1O60336 1514 aa15.88■□□□□ 0.13
BEST3-207ENST00000533674 ADCY10Q96PN6 1610 aa15.86■□□□□ 0.13
BEST3-207ENST00000533674 CUL7Q14999 1698 aa15.86■□□□□ 0.13
BEST3-207ENST00000533674 DIP2BQ9P265 1576 aa15.86■□□□□ 0.13
BEST3-207ENST00000533674 KIF27Q86VH2 1401 aa15.85■□□□□ 0.13
BEST3-207ENST00000533674 KIAA0586Q9BVV6 1533 aa15.84■□□□□ 0.13
BEST3-207ENST00000533674 KDM6BO15054 1643 aa15.83■□□□□ 0.12
BEST3-207ENST00000533674 TTBK1Q5TCY1 1321 aaPredicted RBP15.82■□□□□ 0.12
BEST3-207ENST00000533674 DSG3P32926 999 aa15.81■□□□□ 0.12
BEST3-207ENST00000533674 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
BEST3-207ENST00000533674 TSPOAP1O95153 1857 aa15.8■□□□□ 0.12
BEST3-207ENST00000533674 IGF1RP08069 1367 aa15.78■□□□□ 0.12
BEST3-207ENST00000533674 PTPRGP23470 1445 aa15.77■□□□□ 0.11
BEST3-207ENST00000533674 CARMIL2Q6F5E8 1435 aa15.76■□□□□ 0.11
BEST3-207ENST00000533674 CARMIL1Q5VZK9 1371 aa15.73■□□□□ 0.11
BEST3-207ENST00000533674 TNIKQ9UKE5 1360 aa15.72■□□□□ 0.11
BEST3-207ENST00000533674 IQGAP2Q13576 1575 aa15.71■□□□□ 0.11
BEST3-207ENST00000533674 ABCC2Q92887 1545 aa15.69■□□□□ 0.1
BEST3-207ENST00000533674 ASXL2Q76L83 1435 aa15.67■□□□□ 0.1
BEST3-207ENST00000533674 PLB1Q6P1J6 1458 aa15.66■□□□□ 0.1
BEST3-207ENST00000533674 KDM4FA0A1W2PPD8 638 aa15.65■□□□□ 0.1
BEST3-207ENST00000533674 UACAQ9BZF9 1416 aa15.63■□□□□ 0.09
BEST3-207ENST00000533674 ABCB7O75027 752 aa15.62■□□□□ 0.09
BEST3-207ENST00000533674 UHRF1BP1LA0JNW5 1464 aa15.62■□□□□ 0.09
BEST3-207ENST00000533674 GLI2P10070 1586 aa15.62■□□□□ 0.09
BEST3-207ENST00000533674 ATF5Q9Y2D1 282 aaPredicted RBP15.6■□□□□ 0.09
BEST3-207ENST00000533674 PPRC1Q5VV67 1664 aaKnown RBP15.6■□□□□ 0.09
BEST3-207ENST00000533674 RAPGEF2Q9Y4G8 1499 aa15.59■□□□□ 0.09
BEST3-207ENST00000533674 DISP1Q96F81 1524 aa15.58■□□□□ 0.09
BEST3-207ENST00000533674 TEX14Q8IWB6 1497 aa15.57■□□□□ 0.08
BEST3-207ENST00000533674 ZCCHC11Q5TAX3 1644 aaKnown RBP15.57■□□□□ 0.08
BEST3-207ENST00000533674 EPRSP07814 1512 aaKnown RBP15.56■□□□□ 0.08
BEST3-207ENST00000533674 KIAA0556O60303 1618 aa15.56■□□□□ 0.08
BEST3-207ENST00000533674 MAP3K4Q9Y6R4 1608 aa15.55■□□□□ 0.08
BEST3-207ENST00000533674 UGGT2Q9NYU1 1516 aa15.55■□□□□ 0.08
BEST3-207ENST00000533674 KDM5BQ9UGL1 1544 aa15.55■□□□□ 0.08
BEST3-207ENST00000533674 ADGRL1O94910 1474 aa15.55■□□□□ 0.08
BEST3-207ENST00000533674 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
BEST3-207ENST00000533674 CTTNBP2Q8WZ74 1663 aa15.51■□□□□ 0.07
BEST3-207ENST00000533674 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
BEST3-207ENST00000533674 WDR7Q9Y4E6 1490 aa15.49■□□□□ 0.07
BEST3-207ENST00000533674 EHMT2Q96KQ7 1210 aa15.48■□□□□ 0.07
BEST3-207ENST00000533674 GOLGA3Q08378 1498 aa15.47■□□□□ 0.07
BEST3-207ENST00000533674 COL17A1Q9UMD9 1497 aaPredicted RBP15.46■□□□□ 0.07
BEST3-207ENST00000533674 POLA2Q14181 598 aa15.46■□□□□ 0.07
BEST3-207ENST00000533674 FAM9AQ8IZU1 332 aaPredicted RBP15.45■□□□□ 0.06
BEST3-207ENST00000533674 KCNH8Q96L42 1107 aa15.44■□□□□ 0.06
BEST3-207ENST00000533674 CFAP43Q8NDM7 1665 aa15.44■□□□□ 0.06
BEST3-207ENST00000533674 ILDR1Q86SU0 546 aaPredicted RBP15.42■□□□□ 0.06
BEST3-207ENST00000533674 CD109Q6YHK3 1445 aa15.42■□□□□ 0.06
BEST3-207ENST00000533674 HECW2Q9P2P5 1572 aa15.41■□□□□ 0.06
BEST3-207ENST00000533674 ABCA8O94911 1581 aa15.39■□□□□ 0.05
BEST3-207ENST00000533674 MAGI3Q5TCQ9 1506 aa15.38■□□□□ 0.05
BEST3-207ENST00000533674 ARID3CA6NKF2 412 aa15.35■□□□□ 0.05
BEST3-207ENST00000533674 KIF21BO75037 1637 aa15.33■□□□□ 0.04
BEST3-207ENST00000533674 P3H3Q8IVL6 736 aa15.32■□□□□ 0.04
BEST3-207ENST00000533674 PRXQ9BXM0 1461 aa15.31■□□□□ 0.04
BEST3-207ENST00000533674 ARAP3Q8WWN8 1544 aa15.27■□□□□ 0.03
BEST3-207ENST00000533674 ATP10BO94823 1461 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms