RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CADPSQ9ULU8 1353 aa24.01■■□□□ 1.43
CTSB-228ENST00000533455 FHAD1B1AJZ9 1412 aa24■■□□□ 1.43
CTSB-228ENST00000533455 SUPT16HQ9Y5B9 1047 aaKnown RBP23.98■■□□□ 1.43
CTSB-228ENST00000533455 PCF11O94913 1555 aaKnown RBP23.97■■□□□ 1.43
CTSB-228ENST00000533455 ITGAEP38570 1179 aa23.96■■□□□ 1.43
CTSB-228ENST00000533455 PHLDB1Q86UU1 1377 aa23.95■■□□□ 1.43
CTSB-228ENST00000533455 EFCAB5A4FU69 1503 aa23.89■■□□□ 1.41
CTSB-228ENST00000533455 WDR97A6NE52 1622 aa23.88■■□□□ 1.41
CTSB-228ENST00000533455 FYCO1Q9BQS8 1478 aa23.87■■□□□ 1.41
CTSB-228ENST00000533455 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.86■■□□□ 1.412e-6■■□□□ 11.9
CTSB-228ENST00000533455 AQRO60306 1485 aaKnown RBP eCLIP23.85■■□□□ 1.413e-7■■■■■ 33.7
CTSB-228ENST00000533455 TIMELESSQ9UNS1 1208 aa23.84■■□□□ 1.41
CTSB-228ENST00000533455 DNMBPQ6XZF7 1577 aa23.82■■□□□ 1.4
CTSB-228ENST00000533455 CTTNBP2Q8WZ74 1663 aa23.82■■□□□ 1.4
CTSB-228ENST00000533455 CUL7Q14999 1698 aa23.81■■□□□ 1.4
CTSB-228ENST00000533455 ABCA10Q8WWZ4 1543 aa23.81■■□□□ 1.4
CTSB-228ENST00000533455 CASKIN1Q8WXD9 1431 aa23.81■■□□□ 1.4
CTSB-228ENST00000533455 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
CTSB-228ENST00000533455 FAM50AQ14320 339 aaKnown RBP23.76■■□□□ 1.39
CTSB-228ENST00000533455 FHOD3Q2V2M9 1422 aa23.76■■□□□ 1.39
CTSB-228ENST00000533455 SIN3AQ96ST3 1273 aa23.72■■□□□ 1.39
CTSB-228ENST00000533455 KCNH8Q96L42 1107 aa23.71■■□□□ 1.39
CTSB-228ENST00000533455 TOPBP1Q92547 1522 aa23.7■■□□□ 1.39
CTSB-228ENST00000533455 POLA1P09884 1462 aaPredicted RBP23.7■■□□□ 1.38
CTSB-228ENST00000533455 PPP1R15AO75807 674 aaPredicted RBP23.7■■□□□ 1.38
CTSB-228ENST00000533455 DNAJC5BQ9UF47 199 aa23.69■■□□□ 1.38
CTSB-228ENST00000533455 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
CTSB-228ENST00000533455 FGD6Q6ZV73 1430 aa23.67■■□□□ 1.38
CTSB-228ENST00000533455 SNAPC4Q5SXM2 1469 aa23.66■■□□□ 1.38
CTSB-228ENST00000533455 FMN1Q68DA7 1419 aa23.66■■□□□ 1.38
CTSB-228ENST00000533455 P3H3Q8IVL6 736 aa23.66■■□□□ 1.38
CTSB-228ENST00000533455 DDX10Q13206 875 aaKnown RBP23.65■■□□□ 1.38
CTSB-228ENST00000533455 TSHZ2Q9NRE2 1034 aa23.65■■□□□ 1.38
CTSB-228ENST00000533455 SAMD9Q5K651 1589 aa23.62■■□□□ 1.37
CTSB-228ENST00000533455 CCER2I3L3R5 266 aa23.61■■□□□ 1.37
CTSB-228ENST00000533455 CCDC18Q5T9S5 1454 aa23.6■■□□□ 1.37
CTSB-228ENST00000533455 PTPN23Q9H3S7 1636 aa23.6■■□□□ 1.37
CTSB-228ENST00000533455 LRRIQ1Q96JM4 1722 aa23.59■■□□□ 1.37
CTSB-228ENST00000533455 HFM1A2PYH4 1435 aa23.59■■□□□ 1.37
CTSB-228ENST00000533455 THOC2Q8NI27 1593 aaKnown RBP23.59■■□□□ 1.37
CTSB-228ENST00000533455 ATP1B4Q9UN42 357 aaPredicted RBP23.58■■□□□ 1.37
CTSB-228ENST00000533455 UACAQ9BZF9 1416 aa23.57■■□□□ 1.36
CTSB-228ENST00000533455 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
CTSB-228ENST00000533455 KIF21AQ7Z4S6 1674 aa23.53■■□□□ 1.36
CTSB-228ENST00000533455 GRIN2BQ13224 1484 aa23.52■■□□□ 1.36
CTSB-228ENST00000533455 SUPT6HQ7KZ85 1726 aaKnown RBP23.52■■□□□ 1.36
CTSB-228ENST00000533455 NESP48681 1621 aa23.52■■□□□ 1.35
CTSB-228ENST00000533455 PTPRKQ15262 1439 aa23.51■■□□□ 1.35
CTSB-228ENST00000533455 TONSLQ96HA7 1378 aa23.51■■□□□ 1.35
CTSB-228ENST00000533455 MTUS2Q5JR59 1369 aa23.51■■□□□ 1.35
CTSB-228ENST00000533455 EHBP1L1Q8N3D4 1523 aa23.5■■□□□ 1.35
CTSB-228ENST00000533455 MYOM3Q5VTT5 1437 aa23.49■■□□□ 1.35
CTSB-228ENST00000533455 ANP32CO43423 234 aa23.49■■□□□ 1.35
CTSB-228ENST00000533455 NCOA2Q15596 1464 aa23.48■■□□□ 1.35
CTSB-228ENST00000533455 NAIPQ13075 1403 aa23.47■■□□□ 1.35
CTSB-228ENST00000533455 KDM5BQ9UGL1 1544 aa23.46■■□□□ 1.35
CTSB-228ENST00000533455 LAMC3Q9Y6N6 1575 aa23.46■■□□□ 1.35
CTSB-228ENST00000533455 URB2Q14146 1524 aaKnown RBP23.45■■□□□ 1.34
CTSB-228ENST00000533455 FKBP8Q14318 412 aa23.45■■□□□ 1.34
CTSB-228ENST00000533455 ARHGEF11O15085 1522 aa23.45■■□□□ 1.34
CTSB-228ENST00000533455 UGGT2Q9NYU1 1516 aa23.43■■□□□ 1.34
CTSB-228ENST00000533455 GCC2Q8IWJ2 1684 aa23.42■■□□□ 1.34
CTSB-228ENST00000533455 HIRIP3Q9BW71 556 aaPredicted RBP23.41■■□□□ 1.34
CTSB-228ENST00000533455 HECW1Q76N89 1606 aa23.39■■□□□ 1.34
CTSB-228ENST00000533455 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
CTSB-228ENST00000533455 NEFLP07196 543 aa23.38■■□□□ 1.33
CTSB-228ENST00000533455 TCOF1Q13428 1488 aaKnown RBP23.38■■□□□ 1.33
CTSB-228ENST00000533455 BCANQ96GW7 911 aa23.37■■□□□ 1.33
CTSB-228ENST00000533455 AKNAQ7Z591 1439 aa23.34■■□□□ 1.33
CTSB-228ENST00000533455 ANP32EQ9BTT0 268 aa23.33■■□□□ 1.33
CTSB-228ENST00000533455 MAGI3Q5TCQ9 1506 aa23.33■■□□□ 1.33
CTSB-228ENST00000533455 TRIM52Q96A61 297 aa23.32■■□□□ 1.32
CTSB-228ENST00000533455 TDRD9Q8NDG6 1382 aaKnown RBP23.3■■□□□ 1.32
CTSB-228ENST00000533455 DENND4BO75064 1496 aaPredicted RBP23.27■■□□□ 1.32
CTSB-228ENST00000533455 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
CTSB-228ENST00000533455 PBRM1Q86U86 1689 aa23.22■■□□□ 1.31
CTSB-228ENST00000533455 PDS5BQ9NTI5 1447 aa23.21■■□□□ 1.31
CTSB-228ENST00000533455 MIA2Q96PC5 1412 aa23.2■■□□□ 1.31
CTSB-228ENST00000533455 KDM6BO15054 1643 aa23.2■■□□□ 1.31
CTSB-228ENST00000533455 EPRSP07814 1512 aaKnown RBP23.18■■□□□ 1.3
CTSB-228ENST00000533455 IQGAP2Q13576 1575 aa23.18■■□□□ 1.3
CTSB-228ENST00000533455 WDR62O43379 1518 aa23.16■■□□□ 1.3
CTSB-228ENST00000533455 WASHC2AQ641Q2 1341 aa23.16■■□□□ 1.3
CTSB-228ENST00000533455 HSPA5P11021 654 aaKnown RBP23.15■■□□□ 1.3
CTSB-228ENST00000533455 RBM19Q9Y4C8 960 aaKnown RBP23.15■■□□□ 1.3
CTSB-228ENST00000533455 CNTLNQ9NXG0 1405 aa23.14■■□□□ 1.3
CTSB-228ENST00000533455 RRP7BPQ9NSQ0 103 aa23.14■■□□□ 1.29
CTSB-228ENST00000533455 ADAMTS12P58397 1594 aa23.14■■□□□ 1.29
CTSB-228ENST00000533455 POLR1AO95602 1720 aaPredicted RBP23.1■■□□□ 1.29
CTSB-228ENST00000533455 EIF4G2P78344 907 aaKnown RBP eCLIP23.09■■□□□ 1.29
CTSB-228ENST00000533455 HNRNPUQ00839 825 aaKnown RBP eCLIP23.09■■□□□ 1.29
CTSB-228ENST00000533455 CDK13Q14004 1512 aaKnown RBP23.09■■□□□ 1.29
CTSB-228ENST00000533455 NCOA1Q15788 1441 aa23.07■■□□□ 1.28
CTSB-228ENST00000533455 CHIC2Q9UKJ5 165 aa23.07■■□□□ 1.28
CTSB-228ENST00000533455 MPHOSPH9Q99550 1183 aa23.06■■□□□ 1.28
CTSB-228ENST00000533455 ROCK1Q13464 1354 aa23.06■■□□□ 1.28
CTSB-228ENST00000533455 DNMT1P26358 1616 aaKnown RBP23.06■■□□□ 1.28
CTSB-228ENST00000533455 RPRD2Q5VT52 1461 aaKnown RBP23.04■■□□□ 1.28
CTSB-228ENST00000533455 ERICH6BQ5W0A0 696 aa23.04■■□□□ 1.28
CTSB-228ENST00000533455 TEX14Q8IWB6 1497 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms