RNA–Protein interactions for RNA: ENST00000532886.2

AP004608.1-204, humanhuman

TSL 2

Gene AP004608.1, Length 4,435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-204ENST00000532886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.46■□□□□ 0.38
AP004608.1-204ENST00000532886 PLEKHD1A6NEE1 506 aa17.45■□□□□ 0.38
AP004608.1-204ENST00000532886 HIRIP3Q9BW71 556 aaPredicted RBP17.45■□□□□ 0.38
AP004608.1-204ENST00000532886 MIER1Q8N108 512 aa17.44■□□□□ 0.38
AP004608.1-204ENST00000532886 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
AP004608.1-204ENST00000532886 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
AP004608.1-204ENST00000532886 RUSC2Q8N2Y8 1516 aa17.4■□□□□ 0.38
AP004608.1-204ENST00000532886 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.37
AP004608.1-204ENST00000532886 CCNB3Q8WWL7 1395 aa17.39■□□□□ 0.37
AP004608.1-204ENST00000532886 KCNH8Q96L42 1107 aa17.39■□□□□ 0.37
AP004608.1-204ENST00000532886 CFDP1Q9UEE9 299 aaPredicted RBP17.37■□□□□ 0.37
AP004608.1-204ENST00000532886 ESF1Q9H501 851 aaKnown RBP17.37■□□□□ 0.37
AP004608.1-204ENST00000532886 KDM2AQ9Y2K7 1162 aa17.36■□□□□ 0.37
AP004608.1-204ENST00000532886 CHGAP10645 457 aaKnown RBP17.36■□□□□ 0.37
AP004608.1-204ENST00000532886 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
AP004608.1-204ENST00000532886 SIN3AQ96ST3 1273 aa17.33■□□□□ 0.37
AP004608.1-204ENST00000532886 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
AP004608.1-204ENST00000532886 HNRNPUQ00839 825 aaKnown RBP eCLIP17.31■□□□□ 0.36
AP004608.1-204ENST00000532886 FAM9BQ8IZU0 186 aa17.29■□□□□ 0.36
AP004608.1-204ENST00000532886 CLSPNQ9HAW4 1339 aa17.29■□□□□ 0.36
AP004608.1-204ENST00000532886 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
AP004608.1-204ENST00000532886 CC2D2AQ9P2K1 1620 aa17.27■□□□□ 0.35
AP004608.1-204ENST00000532886 FKBP8Q14318 412 aa17.23■□□□□ 0.35
AP004608.1-204ENST00000532886 CFTRP13569 1480 aa17.21■□□□□ 0.35
AP004608.1-204ENST00000532886 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
AP004608.1-204ENST00000532886 RGL3Q3MIN7 710 aa17.19■□□□□ 0.34
AP004608.1-204ENST00000532886 MRS2Q9HD23 443 aa17.19■□□□□ 0.34
AP004608.1-204ENST00000532886 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
AP004608.1-204ENST00000532886 TMC1Q8TDI8 760 aa17.18■□□□□ 0.34
AP004608.1-204ENST00000532886 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
AP004608.1-204ENST00000532886 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
AP004608.1-204ENST00000532886 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
AP004608.1-204ENST00000532886 FMN1Q68DA7 1419 aa17.16■□□□□ 0.34
AP004608.1-204ENST00000532886 SETD5Q9C0A6 1442 aa17.16■□□□□ 0.34
AP004608.1-204ENST00000532886 ARHGAP35Q9NRY4 1499 aa17.15■□□□□ 0.34
AP004608.1-204ENST00000532886 SALL2Q9Y467 1007 aaPredicted RBP17.15■□□□□ 0.34
AP004608.1-204ENST00000532886 FHOD3Q2V2M9 1422 aa17.14■□□□□ 0.34
AP004608.1-204ENST00000532886 TOP2BQ02880 1626 aa17.13■□□□□ 0.33
AP004608.1-204ENST00000532886 BIVM-ERCC5R4GMW8 1640 aa17.1■□□□□ 0.33
AP004608.1-204ENST00000532886 DNAJC5BQ9UF47 199 aa17.1■□□□□ 0.33
AP004608.1-204ENST00000532886 CANXP27824 592 aaKnown RBP17.1■□□□□ 0.33
AP004608.1-204ENST00000532886 IGF1RP08069 1367 aa17.09■□□□□ 0.33
AP004608.1-204ENST00000532886 RAB3GAP2Q9H2M9 1393 aa17.09■□□□□ 0.33
AP004608.1-204ENST00000532886 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
AP004608.1-204ENST00000532886 NEFMP07197 916 aa17.09■□□□□ 0.33
AP004608.1-204ENST00000532886 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.32
AP004608.1-204ENST00000532886 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
AP004608.1-204ENST00000532886 CARMIL2Q6F5E8 1435 aa17.06■□□□□ 0.32
AP004608.1-204ENST00000532886 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
AP004608.1-204ENST00000532886 FGD5Q6ZNL6 1462 aa17.05■□□□□ 0.32
AP004608.1-204ENST00000532886 CARD11Q9BXL7 1154 aa17.04■□□□□ 0.32
AP004608.1-204ENST00000532886 LAMC3Q9Y6N6 1575 aa17.03■□□□□ 0.32
AP004608.1-204ENST00000532886 KIF21BO75037 1637 aa17.01■□□□□ 0.31
AP004608.1-204ENST00000532886 RAD54L2Q9Y4B4 1467 aa17.01■□□□□ 0.31
AP004608.1-204ENST00000532886 SENP3Q9H4L4 574 aaPredicted RBP17.01■□□□□ 0.31
AP004608.1-204ENST00000532886 FOXD1Q16676 465 aa17■□□□□ 0.31
AP004608.1-204ENST00000532886 RTL5Q5HYW3 569 aaPredicted RBP16.99■□□□□ 0.31
AP004608.1-204ENST00000532886 JPH4Q96JJ6 628 aa16.99■□□□□ 0.31
AP004608.1-204ENST00000532886 WDR43Q15061 677 aaKnown RBP eCLIP16.97■□□□□ 0.31
AP004608.1-204ENST00000532886 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
AP004608.1-204ENST00000532886 SLC24A1O60721 1099 aa16.96■□□□□ 0.31
AP004608.1-204ENST00000532886 MPHOSPH9Q99550 1183 aa16.95■□□□□ 0.3
AP004608.1-204ENST00000532886 PKD2Q13563 968 aa16.95■□□□□ 0.3
AP004608.1-204ENST00000532886 DCAF11Q8TEB1 546 aa16.94■□□□□ 0.3
AP004608.1-204ENST00000532886 SENP3-EIF4A1A0A087X0R7 540 aa16.93■□□□□ 0.3
AP004608.1-204ENST00000532886 BCL11AQ9H165 835 aa16.93■□□□□ 0.3
AP004608.1-204ENST00000532886 GAPVD1Q14C86 1478 aa16.92■□□□□ 0.3
AP004608.1-204ENST00000532886 ARID4BQ4LE39 1312 aaPredicted RBP16.92■□□□□ 0.3
AP004608.1-204ENST00000532886 ZBTB47Q9UFB7 747 aaPredicted RBP16.92■□□□□ 0.3
AP004608.1-204ENST00000532886 CUX1P39880 1505 aa16.92■□□□□ 0.3
AP004608.1-204ENST00000532886 ERICH3Q5RHP9 1530 aa16.92■□□□□ 0.3
AP004608.1-204ENST00000532886 PPP1R15AO75807 674 aaPredicted RBP16.91■□□□□ 0.3
AP004608.1-204ENST00000532886 CCDC136Q96JN2 1154 aa16.9■□□□□ 0.3
AP004608.1-204ENST00000532886 DNMBPQ6XZF7 1577 aa16.9■□□□□ 0.3
AP004608.1-204ENST00000532886 DHX57Q6P158 1386 aaKnown RBP16.9■□□□□ 0.3
AP004608.1-204ENST00000532886 HSPA5P11021 654 aaKnown RBP16.89■□□□□ 0.29
AP004608.1-204ENST00000532886 MRC2Q9UBG0 1479 aa16.86■□□□□ 0.29
AP004608.1-204ENST00000532886 CDCA8Q53HL2 280 aa16.86■□□□□ 0.29
AP004608.1-204ENST00000532886 NUP155O75694 1391 aa16.85■□□□□ 0.29
AP004608.1-204ENST00000532886 HNRNPMP52272 730 aaKnown RBP eCLIP16.85■□□□□ 0.29
AP004608.1-204ENST00000532886 EFCAB2Q5VUJ9 269 aa16.85■□□□□ 0.29
AP004608.1-204ENST00000532886 CYB5RLQ6IPT4 315 aa16.85■□□□□ 0.29
AP004608.1-204ENST00000532886 KNSTRNQ9Y448 316 aa16.85■□□□□ 0.29
AP004608.1-204ENST00000532886 CCDC18Q5T9S5 1454 aa16.85■□□□□ 0.29
AP004608.1-204ENST00000532886 ANKRD30AQ9BXX3 1397 aa16.84■□□□□ 0.29
AP004608.1-204ENST00000532886 ANP32AP39687 249 aaKnown RBP16.84■□□□□ 0.29
AP004608.1-204ENST00000532886 NPM2Q86SE8 214 aaKnown RBP16.84■□□□□ 0.29
AP004608.1-204ENST00000532886 NESP48681 1621 aa16.84■□□□□ 0.29
AP004608.1-204ENST00000532886 SUPT16HQ9Y5B9 1047 aaKnown RBP16.83■□□□□ 0.28
AP004608.1-204ENST00000532886 L3MBTL2Q969R5 705 aa16.82■□□□□ 0.28
AP004608.1-204ENST00000532886 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.28
AP004608.1-204ENST00000532886 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.8■□□□□ 0.28
AP004608.1-204ENST00000532886 ARAP1Q96P48 1450 aa16.79■□□□□ 0.28
AP004608.1-204ENST00000532886 PRXQ9BXM0 1461 aa16.79■□□□□ 0.28
AP004608.1-204ENST00000532886 CCER2I3L3R5 266 aa16.77■□□□□ 0.28
AP004608.1-204ENST00000532886 KANK1Q14678 1352 aa16.77■□□□□ 0.27
AP004608.1-204ENST00000532886 GGT6Q6P531 493 aa16.76■□□□□ 0.27
AP004608.1-204ENST00000532886 PHLDB1Q86UU1 1377 aa16.75■□□□□ 0.27
AP004608.1-204ENST00000532886 TOPBP1Q92547 1522 aa16.75■□□□□ 0.27
AP004608.1-204ENST00000532886 CC2D1BQ5T0F9 858 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms