RNA–Protein interactions for RNA: ENST00000532886.2

AP004608.1-204, humanhuman

TSL 2

Gene AP004608.1, Length 4,435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-204ENST00000532886 NISCHQ9Y2I1 1504 aa23.55■■□□□ 1.36
AP004608.1-204ENST00000532886 DCAF8L2P0C7V8 631 aa22.52■■□□□ 1.2
AP004608.1-204ENST00000532886 SUPT5HO00267 1087 aaKnown RBP21.56■■□□□ 1.04
AP004608.1-204ENST00000532886 SHROOM4Q9ULL8 1493 aa21.5■■□□□ 1.03
AP004608.1-204ENST00000532886 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
AP004608.1-204ENST00000532886 EHMT2Q96KQ7 1210 aa20.46■□□□□ 0.87
AP004608.1-204ENST00000532886 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
AP004608.1-204ENST00000532886 TRIM41Q8WV44 630 aa20■□□□□ 0.79
AP004608.1-204ENST00000532886 ABCC9O60706 1549 aa19.97■□□□□ 0.79
AP004608.1-204ENST00000532886 PCGF6Q9BYE7 350 aa19.87■□□□□ 0.77
AP004608.1-204ENST00000532886 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
AP004608.1-204ENST00000532886 APLP2Q06481 763 aa19.79■□□□□ 0.76
AP004608.1-204ENST00000532886 TTBK1Q5TCY1 1321 aaPredicted RBP19.71■□□□□ 0.75
AP004608.1-204ENST00000532886 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
AP004608.1-204ENST00000532886 DCAF1Q9Y4B6 1507 aa19.63■□□□□ 0.73
AP004608.1-204ENST00000532886 RANGAP1P46060 587 aaPredicted RBP19.6■□□□□ 0.73
AP004608.1-204ENST00000532886 UBTFP17480 764 aaKnown RBP19.55■□□□□ 0.72
AP004608.1-204ENST00000532886 LOC105371045A0A1W2PR82 267 aa19.47■□□□□ 0.71
AP004608.1-204ENST00000532886 PABPN1Q86U42 306 aaKnown RBP eCLIP19.37■□□□□ 0.69
AP004608.1-204ENST00000532886 MYO15BQ96JP2 1530 aa19.36■□□□□ 0.69
AP004608.1-204ENST00000532886 PPARGC1BQ86YN6 1023 aaKnown RBP19.33■□□□□ 0.69
AP004608.1-204ENST00000532886 CCER1Q8TC90 406 aaPredicted RBP19.28■□□□□ 0.68
AP004608.1-204ENST00000532886 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
AP004608.1-204ENST00000532886 ZEB1P37275 1124 aaPredicted RBP19.26■□□□□ 0.67
AP004608.1-204ENST00000532886 TRIM26Q12899 539 aaPredicted RBP19.21■□□□□ 0.67
AP004608.1-204ENST00000532886 NACADO15069 1562 aa19.17■□□□□ 0.66
AP004608.1-204ENST00000532886 HRCP23327 699 aa18.99■□□□□ 0.63
AP004608.1-204ENST00000532886 SCRIBQ14160 1630 aa18.98■□□□□ 0.63
AP004608.1-204ENST00000532886 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
AP004608.1-204ENST00000532886 HNRNPUL2Q1KMD3 747 aaKnown RBP18.8■□□□□ 0.6
AP004608.1-204ENST00000532886 ITGAEP38570 1179 aa18.79■□□□□ 0.6
AP004608.1-204ENST00000532886 CENPBP07199 599 aaPredicted RBP18.75■□□□□ 0.59
AP004608.1-204ENST00000532886 PELP1Q8IZL8 1130 aaKnown RBP18.73■□□□□ 0.59
AP004608.1-204ENST00000532886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.66■□□□□ 0.58
AP004608.1-204ENST00000532886 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
AP004608.1-204ENST00000532886 RSF1Q96T23 1441 aaPredicted RBP18.56■□□□□ 0.56
AP004608.1-204ENST00000532886 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
AP004608.1-204ENST00000532886 FAM50AQ14320 339 aaKnown RBP18.41■□□□□ 0.54
AP004608.1-204ENST00000532886 P3H3Q8IVL6 736 aa18.32■□□□□ 0.52
AP004608.1-204ENST00000532886 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
AP004608.1-204ENST00000532886 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
AP004608.1-204ENST00000532886 DIEXFQ68CQ4 756 aaKnown RBP18.27■□□□□ 0.51
AP004608.1-204ENST00000532886 MYT1LQ9UL68 1186 aa18.27■□□□□ 0.51
AP004608.1-204ENST00000532886 FBLN2P98095 1184 aa18.25■□□□□ 0.51
AP004608.1-204ENST00000532886 NEFLP07196 543 aa18.2■□□□□ 0.5
AP004608.1-204ENST00000532886 POLR3GLQ9BT43 218 aa18.19■□□□□ 0.5
AP004608.1-204ENST00000532886 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
AP004608.1-204ENST00000532886 TRIM52Q96A61 297 aa18.16■□□□□ 0.5
AP004608.1-204ENST00000532886 UNC13AQ9UPW8 1703 aa18.14■□□□□ 0.49
AP004608.1-204ENST00000532886 ARID3CA6NKF2 412 aa18.12■□□□□ 0.49
AP004608.1-204ENST00000532886 BAZ1BQ9UIG0 1483 aaKnown RBP18.09■□□□□ 0.49
AP004608.1-204ENST00000532886 CNGB1Q14028 1251 aaPredicted RBP18.07■□□□□ 0.48
AP004608.1-204ENST00000532886 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
AP004608.1-204ENST00000532886 SMARCA4P51532 1647 aa18.06■□□□□ 0.48
AP004608.1-204ENST00000532886 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
AP004608.1-204ENST00000532886 ZNF316A6NFI3 1004 aaPredicted RBP18.01■□□□□ 0.47
AP004608.1-204ENST00000532886 EEA1Q15075 1411 aa18.01■□□□□ 0.47
AP004608.1-204ENST00000532886 BICRAQ9NZM4 1560 aa17.99■□□□□ 0.47
AP004608.1-204ENST00000532886 CLIP1P30622 1438 aa17.99■□□□□ 0.47
AP004608.1-204ENST00000532886 TOP2AP11388 1531 aaKnown RBP17.97■□□□□ 0.47
AP004608.1-204ENST00000532886 CEP162Q5TB80 1403 aa17.94■□□□□ 0.46
AP004608.1-204ENST00000532886 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
AP004608.1-204ENST00000532886 GOLGA3Q08378 1498 aa17.92■□□□□ 0.46
AP004608.1-204ENST00000532886 SMARCA2P51531 1590 aa17.92■□□□□ 0.46
AP004608.1-204ENST00000532886 WIZO95785 1651 aa17.9■□□□□ 0.46
AP004608.1-204ENST00000532886 ERICH6Q7L0X2 663 aa17.89■□□□□ 0.45
AP004608.1-204ENST00000532886 CDK11AQ9UQ88 783 aaPredicted RBP17.89■□□□□ 0.45
AP004608.1-204ENST00000532886 ZNF777Q9ULD5 760 aaPredicted RBP17.87■□□□□ 0.45
AP004608.1-204ENST00000532886 TNIKQ9UKE5 1360 aa17.87■□□□□ 0.45
AP004608.1-204ENST00000532886 CCDC88BA6NC98 1476 aa17.87■□□□□ 0.45
AP004608.1-204ENST00000532886 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
AP004608.1-204ENST00000532886 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
AP004608.1-204ENST00000532886 SOGA1O94964 1423 aa17.82■□□□□ 0.44
AP004608.1-204ENST00000532886 KIF27Q86VH2 1401 aa17.82■□□□□ 0.44
AP004608.1-204ENST00000532886 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
AP004608.1-204ENST00000532886 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
AP004608.1-204ENST00000532886 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
AP004608.1-204ENST00000532886 ANP32CO43423 234 aa17.76■□□□□ 0.43
AP004608.1-204ENST00000532886 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
AP004608.1-204ENST00000532886 MTUS2Q5JR59 1369 aa17.74■□□□□ 0.43
AP004608.1-204ENST00000532886 CHIC2Q9UKJ5 165 aa17.73■□□□□ 0.43
AP004608.1-204ENST00000532886 GTF3C3Q9Y5Q9 886 aa17.72■□□□□ 0.43
AP004608.1-204ENST00000532886 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
AP004608.1-204ENST00000532886 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
AP004608.1-204ENST00000532886 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
AP004608.1-204ENST00000532886 TONSLQ96HA7 1378 aa17.66■□□□□ 0.42
AP004608.1-204ENST00000532886 HMGXB3Q12766 1538 aa17.64■□□□□ 0.41
AP004608.1-204ENST00000532886 ACIN1Q9UKV3 1341 aaKnown RBP17.62■□□□□ 0.41
AP004608.1-204ENST00000532886 EIF4G1Q04637 1599 aaKnown RBP17.61■□□□□ 0.41
AP004608.1-204ENST00000532886 CUX2O14529 1486 aa17.6■□□□□ 0.41
AP004608.1-204ENST00000532886 CARMIL1Q5VZK9 1371 aa17.58■□□□□ 0.41
AP004608.1-204ENST00000532886 NCAPD3P42695 1498 aa17.58■□□□□ 0.41
AP004608.1-204ENST00000532886 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
AP004608.1-204ENST00000532886 BCANQ96GW7 911 aa17.54■□□□□ 0.4
AP004608.1-204ENST00000532886 RRP7BPQ9NSQ0 103 aa17.54■□□□□ 0.4
AP004608.1-204ENST00000532886 TSPY4P0CV99 314 aa17.52■□□□□ 0.4
AP004608.1-204ENST00000532886 TSPY10P0CW01 314 aa17.52■□□□□ 0.4
AP004608.1-204ENST00000532886 MYT1Q01538 1121 aa17.51■□□□□ 0.39
AP004608.1-204ENST00000532886 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
AP004608.1-204ENST00000532886 VPS8Q8N3P4 1428 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms