RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 RAB3GAP2Q9H2M9 1393 aa21.39■■□□□ 1.02
NXF1-213ENST00000532297 TIAM1Q13009 1591 aa21.38■■□□□ 1.01
NXF1-213ENST00000532297 FAM50AQ14320 339 aaKnown RBP21.37■■□□□ 1.01
NXF1-213ENST00000532297 PHLDB1Q86UU1 1377 aa21.36■■□□□ 1.01
NXF1-213ENST00000532297 RAD54L2Q9Y4B4 1467 aa21.36■■□□□ 1.01
NXF1-213ENST00000532297 KCNH8Q96L42 1107 aa21.33■■□□□ 1
NXF1-213ENST00000532297 MAPKBP1O60336 1514 aa21.33■■□□□ 1
NXF1-213ENST00000532297 PCF11O94913 1555 aaKnown RBP21.32■■□□□ 1
NXF1-213ENST00000532297 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
NXF1-213ENST00000532297 FHOD3Q2V2M9 1422 aa21.32■■□□□ 1
NXF1-213ENST00000532297 SIN3AQ96ST3 1273 aa21.31■■□□□ 1
NXF1-213ENST00000532297 NESP48681 1621 aa21.31■■□□□ 1
NXF1-213ENST00000532297 LRRC9Q6ZRR7 1453 aa21.29■■□□□ 1
NXF1-213ENST00000532297 BCANQ96GW7 911 aa21.29■■□□□ 1
NXF1-213ENST00000532297 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
NXF1-213ENST00000532297 HIRIP3Q9BW71 556 aaPredicted RBP21.25■□□□□ 0.99
NXF1-213ENST00000532297 SETD5Q9C0A6 1442 aa21.2■□□□□ 0.98
NXF1-213ENST00000532297 FKBP8Q14318 412 aa21.19■□□□□ 0.98
NXF1-213ENST00000532297 WDR97A6NE52 1622 aa21.19■□□□□ 0.98
NXF1-213ENST00000532297 CFAP43Q8NDM7 1665 aa21.19■□□□□ 0.98
NXF1-213ENST00000532297 POLA1P09884 1462 aaPredicted RBP21.18■□□□□ 0.98
NXF1-213ENST00000532297 TOPBP1Q92547 1522 aa21.15■□□□□ 0.98
NXF1-213ENST00000532297 MAP3K1Q13233 1512 aa21.12■□□□□ 0.97
NXF1-213ENST00000532297 DDX10Q13206 875 aaKnown RBP21.12■□□□□ 0.97
NXF1-213ENST00000532297 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
NXF1-213ENST00000532297 DNMBPQ6XZF7 1577 aa21.12■□□□□ 0.97
NXF1-213ENST00000532297 FHAD1B1AJZ9 1412 aa21.11■□□□□ 0.97
NXF1-213ENST00000532297 RBM19Q9Y4C8 960 aaKnown RBP21.11■□□□□ 0.97
NXF1-213ENST00000532297 ABCA10Q8WWZ4 1543 aa21.07■□□□□ 0.96
NXF1-213ENST00000532297 TDRD9Q8NDG6 1382 aaKnown RBP21.07■□□□□ 0.96
NXF1-213ENST00000532297 NEFLP07196 543 aa21.05■□□□□ 0.96
NXF1-213ENST00000532297 CTTNBP2Q8WZ74 1663 aa21.05■□□□□ 0.96
NXF1-213ENST00000532297 FYCO1Q9BQS8 1478 aa21.02■□□□□ 0.96
NXF1-213ENST00000532297 LRRIQ1Q96JM4 1722 aa21.02■□□□□ 0.96
NXF1-213ENST00000532297 URB2Q14146 1524 aaKnown RBP21.02■□□□□ 0.96
NXF1-213ENST00000532297 CASKIN1Q8WXD9 1431 aa21■□□□□ 0.95
NXF1-213ENST00000532297 PTPRKQ15262 1439 aa20.99■□□□□ 0.95
NXF1-213ENST00000532297 ARID3CA6NKF2 412 aa20.98■□□□□ 0.95
NXF1-213ENST00000532297 SNAPC4Q5SXM2 1469 aa20.97■□□□□ 0.95
NXF1-213ENST00000532297 CUL7Q14999 1698 aa20.96■□□□□ 0.95
NXF1-213ENST00000532297 FGD6Q6ZV73 1430 aa20.96■□□□□ 0.95
NXF1-213ENST00000532297 MTUS2Q5JR59 1369 aa20.96■□□□□ 0.95
NXF1-213ENST00000532297 EFCAB5A4FU69 1503 aa20.95■□□□□ 0.94
NXF1-213ENST00000532297 CCDC18Q5T9S5 1454 aa20.91■□□□□ 0.94
NXF1-213ENST00000532297 TRIM52Q96A61 297 aa20.91■□□□□ 0.94
NXF1-213ENST00000532297 PPP1R15AO75807 674 aaPredicted RBP20.89■□□□□ 0.93
NXF1-213ENST00000532297 CHIC2Q9UKJ5 165 aa20.89■□□□□ 0.93
NXF1-213ENST00000532297 MSH5O43196 834 aa20.88■□□□□ 0.93
NXF1-213ENST00000532297 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.932e-7■■■□□ 19.2
NXF1-213ENST00000532297 FMN1Q68DA7 1419 aa20.87■□□□□ 0.93
NXF1-213ENST00000532297 GAPVD1Q14C86 1478 aa20.86■□□□□ 0.93
NXF1-213ENST00000532297 NCOA2Q15596 1464 aa20.86■□□□□ 0.93
NXF1-213ENST00000532297 ABCA5Q8WWZ7 1642 aa20.86■□□□□ 0.93
NXF1-213ENST00000532297 RRP7BPQ9NSQ0 103 aa20.85■□□□□ 0.93
NXF1-213ENST00000532297 TIMELESSQ9UNS1 1208 aa20.85■□□□□ 0.93
NXF1-213ENST00000532297 MAGI3Q5TCQ9 1506 aa20.84■□□□□ 0.93
NXF1-213ENST00000532297 KIF21AQ7Z4S6 1674 aa20.84■□□□□ 0.93
NXF1-213ENST00000532297 PTPN23Q9H3S7 1636 aa20.84■□□□□ 0.93
NXF1-213ENST00000532297 TONSLQ96HA7 1378 aa20.84■□□□□ 0.93
NXF1-213ENST00000532297 SAMD9Q5K651 1589 aa20.83■□□□□ 0.92
NXF1-213ENST00000532297 CCER2I3L3R5 266 aa20.81■□□□□ 0.92
NXF1-213ENST00000532297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.81■□□□□ 0.92
NXF1-213ENST00000532297 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
NXF1-213ENST00000532297 ANP32CO43423 234 aa20.8■□□□□ 0.92
NXF1-213ENST00000532297 LAMC3Q9Y6N6 1575 aa20.79■□□□□ 0.92
NXF1-213ENST00000532297 NAIPQ13075 1403 aa20.79■□□□□ 0.92
NXF1-213ENST00000532297 MYOM3Q5VTT5 1437 aa20.78■□□□□ 0.92
NXF1-213ENST00000532297 HFM1A2PYH4 1435 aa20.77■□□□□ 0.92
NXF1-213ENST00000532297 KDM6BO15054 1643 aa20.75■□□□□ 0.91
NXF1-213ENST00000532297 ERICH6Q7L0X2 663 aa20.75■□□□□ 0.91
NXF1-213ENST00000532297 FOXD1Q16676 465 aa20.75■□□□□ 0.91
NXF1-213ENST00000532297 FANCIQ9NVI1 1328 aa20.75■□□□□ 0.91
NXF1-213ENST00000532297 SUPT6HQ7KZ85 1726 aaKnown RBP20.75■□□□□ 0.91
NXF1-213ENST00000532297 UACAQ9BZF9 1416 aa20.74■□□□□ 0.91
NXF1-213ENST00000532297 CDK13Q14004 1512 aaKnown RBP20.74■□□□□ 0.91
NXF1-213ENST00000532297 CDK11AQ9UQ88 783 aaPredicted RBP20.7■□□□□ 0.9
NXF1-213ENST00000532297 KDM5BQ9UGL1 1544 aa20.7■□□□□ 0.9
NXF1-213ENST00000532297 EHBP1L1Q8N3D4 1523 aa20.69■□□□□ 0.9
NXF1-213ENST00000532297 UGGT2Q9NYU1 1516 aa20.69■□□□□ 0.9
NXF1-213ENST00000532297 TARBP1Q13395 1621 aaKnown RBP20.68■□□□□ 0.9
NXF1-213ENST00000532297 DENND4BO75064 1496 aaPredicted RBP20.67■□□□□ 0.9
NXF1-213ENST00000532297 PDS5BQ9NTI5 1447 aa20.66■□□□□ 0.9
NXF1-213ENST00000532297 PBRM1Q86U86 1689 aa20.65■□□□□ 0.9
NXF1-213ENST00000532297 IRX6P78412 446 aaPredicted RBP20.65■□□□□ 0.9
NXF1-213ENST00000532297 THOC2Q8NI27 1593 aaKnown RBP20.62■□□□□ 0.89
NXF1-213ENST00000532297 ARHGEF11O15085 1522 aa20.61■□□□□ 0.89
NXF1-213ENST00000532297 HSPA5P11021 654 aaKnown RBP20.6■□□□□ 0.89
NXF1-213ENST00000532297 EPRSP07814 1512 aaKnown RBP20.6■□□□□ 0.89
NXF1-213ENST00000532297 HNRNPUQ00839 825 aaKnown RBP eCLIP20.59■□□□□ 0.89
NXF1-213ENST00000532297 IQGAP2Q13576 1575 aa20.59■□□□□ 0.89
NXF1-213ENST00000532297 ZNF644Q9H582 1327 aaPredicted RBP20.59■□□□□ 0.89
NXF1-213ENST00000532297 WASHC2AQ641Q2 1341 aa20.58■□□□□ 0.88
NXF1-213ENST00000532297 HECW1Q76N89 1606 aa20.57■□□□□ 0.88
NXF1-213ENST00000532297 ZNF608Q9ULD9 1512 aaPredicted RBP20.56■□□□□ 0.88
NXF1-213ENST00000532297 GCC2Q8IWJ2 1684 aa20.56■□□□□ 0.88
NXF1-213ENST00000532297 CCDC184Q52MB2 194 aa20.56■□□□□ 0.88
NXF1-213ENST00000532297 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
NXF1-213ENST00000532297 MYT1LQ9UL68 1186 aa20.54■□□□□ 0.88
NXF1-213ENST00000532297 C11orf95C9JLR9 678 aaPredicted RBP20.53■□□□□ 0.88
NXF1-213ENST00000532297 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms