RNA–Protein interactions for RNA: ENST00000530448.5

LETM2-215, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, humanhuman

TSL 2

Gene LETM2, Length 650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM2-215ENST00000530448 IFT140Q96RY7 1462 aa17.21■□□□□ 0.35
LETM2-215ENST00000530448 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.34
LETM2-215ENST00000530448 AKT1S1Q96B36 256 aa17.19■□□□□ 0.34
LETM2-215ENST00000530448 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
LETM2-215ENST00000530448 CHD1O14646 1710 aa17.15■□□□□ 0.34
LETM2-215ENST00000530448 TOPBP1Q92547 1522 aa17.14■□□□□ 0.33
LETM2-215ENST00000530448 ARAP1Q96P48 1450 aa17.13■□□□□ 0.33
LETM2-215ENST00000530448 ZBTB22O15209 634 aa17.13■□□□□ 0.33
LETM2-215ENST00000530448 AQRO60306 1485 aaKnown RBP eCLIP17.07■□□□□ 0.32
LETM2-215ENST00000530448 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
LETM2-215ENST00000530448 FBLN2P98095 1184 aa17.05■□□□□ 0.32
LETM2-215ENST00000530448 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.32
LETM2-215ENST00000530448 TARBP1Q13395 1621 aaKnown RBP17.02■□□□□ 0.31
LETM2-215ENST00000530448 ATXN8OSP0DMR3 200 aa17.01■□□□□ 0.31
LETM2-215ENST00000530448 REM2Q8IYK8 340 aaPredicted RBP17.01■□□□□ 0.31
LETM2-215ENST00000530448 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
LETM2-215ENST00000530448 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
LETM2-215ENST00000530448 RAD54L2Q9Y4B4 1467 aa16.92■□□□□ 0.3
LETM2-215ENST00000530448 TDRD9Q8NDG6 1382 aaKnown RBP16.89■□□□□ 0.3
LETM2-215ENST00000530448 CLASP1Q7Z460 1538 aa16.89■□□□□ 0.29
LETM2-215ENST00000530448 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
LETM2-215ENST00000530448 PIP4P2Q8N4L2 257 aa16.86■□□□□ 0.29
LETM2-215ENST00000530448 PITPNM1O00562 1244 aa16.83■□□□□ 0.28
LETM2-215ENST00000530448 SOGA1O94964 1423 aa16.83■□□□□ 0.28
LETM2-215ENST00000530448 SYNJ1O43426 1573 aa16.82■□□□□ 0.28
LETM2-215ENST00000530448 CHMP7Q8WUX9 453 aaPredicted RBP16.81■□□□□ 0.28
LETM2-215ENST00000530448 SP7Q8TDD2 431 aaPredicted RBP16.79■□□□□ 0.28
LETM2-215ENST00000530448 FGD5Q6ZNL6 1462 aa16.79■□□□□ 0.28
LETM2-215ENST00000530448 MAGI1Q96QZ7 1491 aaPredicted RBP16.76■□□□□ 0.27
LETM2-215ENST00000530448 GAPVD1Q14C86 1478 aa16.74■□□□□ 0.27
LETM2-215ENST00000530448 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
LETM2-215ENST00000530448 SPDYE2BA6NHP3 402 aa16.73■□□□□ 0.27
LETM2-215ENST00000530448 SPDYE6P0CI01 402 aa16.73■□□□□ 0.27
LETM2-215ENST00000530448 FXR2P51116 673 aaKnown RBP eCLIP16.73■□□□□ 0.27
LETM2-215ENST00000530448 SPDYE2Q495Y8 402 aa16.73■□□□□ 0.27
LETM2-215ENST00000530448 SYNJ2O15056 1496 aa16.73■□□□□ 0.27
LETM2-215ENST00000530448 GRIN2BQ13224 1484 aa16.73■□□□□ 0.27
LETM2-215ENST00000530448 CUX1P39880 1505 aa16.7■□□□□ 0.26
LETM2-215ENST00000530448 PBRM1Q86U86 1689 aa16.69■□□□□ 0.26
LETM2-215ENST00000530448 ERCC6L2Q5T890 1561 aa16.65■□□□□ 0.26
LETM2-215ENST00000530448 HAX1O00165 279 aa16.64■□□□□ 0.25
LETM2-215ENST00000530448 MKRN4PQ13434 485 aaPredicted RBP16.57■□□□□ 0.24
LETM2-215ENST00000530448 ABCA5Q8WWZ7 1642 aa16.56■□□□□ 0.24
LETM2-215ENST00000530448 CEP170Q5SW79 1584 aa16.55■□□□□ 0.24
LETM2-215ENST00000530448 KIF13AQ9H1H9 1805 aa16.54■□□□□ 0.24
LETM2-215ENST00000530448 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
LETM2-215ENST00000530448 ABCA10Q8WWZ4 1543 aa16.53■□□□□ 0.24
LETM2-215ENST00000530448 SPDYE1Q8NFV5 336 aaPredicted RBP16.5■□□□□ 0.23
LETM2-215ENST00000530448 ZNF692Q9BU19 519 aaPredicted RBP16.5■□□□□ 0.23
LETM2-215ENST00000530448 ADAMTS12P58397 1594 aa16.49■□□□□ 0.23
LETM2-215ENST00000530448 NUP160Q12769 1436 aa16.48■□□□□ 0.23
LETM2-215ENST00000530448 CLEC11AQ9Y240 323 aa16.48■□□□□ 0.23
LETM2-215ENST00000530448 SHROOM2Q13796 1616 aa16.46■□□□□ 0.23
LETM2-215ENST00000530448 SSUH2Q9Y2M2 353 aa16.46■□□□□ 0.23
LETM2-215ENST00000530448 PRKAR2AP13861 404 aaKnown RBP16.41■□□□□ 0.22
LETM2-215ENST00000530448 FHAD1B1AJZ9 1412 aa16.38■□□□□ 0.21
LETM2-215ENST00000530448 PRG4Q92954 1404 aaPredicted RBP16.38■□□□□ 0.21
LETM2-215ENST00000530448 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
LETM2-215ENST00000530448 FAM69CQ0P6D2 419 aa16.37■□□□□ 0.21
LETM2-215ENST00000530448 EVX2Q03828 476 aa16.36■□□□□ 0.21
LETM2-215ENST00000530448 ABCC10Q5T3U5 1492 aa16.34■□□□□ 0.21
LETM2-215ENST00000530448 KDM4FA0A1W2PPD8 638 aa16.33■□□□□ 0.2
LETM2-215ENST00000530448 DIP2BQ9P265 1576 aa16.31■□□□□ 0.2
LETM2-215ENST00000530448 ILDR1Q86SU0 546 aaPredicted RBP16.31■□□□□ 0.2
LETM2-215ENST00000530448 JPH4Q96JJ6 628 aa16.3■□□□□ 0.2
LETM2-215ENST00000530448 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
LETM2-215ENST00000530448 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
LETM2-215ENST00000530448 TSPOAP1O95153 1857 aa16.29■□□□□ 0.2
LETM2-215ENST00000530448 KDM6BO15054 1643 aa16.29■□□□□ 0.2
LETM2-215ENST00000530448 TOP2BQ02880 1626 aa16.29■□□□□ 0.2
LETM2-215ENST00000530448 MAPKBP1O60336 1514 aa16.28■□□□□ 0.2
LETM2-215ENST00000530448 ADCY10Q96PN6 1610 aa16.27■□□□□ 0.2
LETM2-215ENST00000530448 NPM1P06748 294 aaKnown RBP eCLIP16.27■□□□□ 0.2
LETM2-215ENST00000530448 RUSC2Q8N2Y8 1516 aa16.26■□□□□ 0.19
LETM2-215ENST00000530448 C19orf67A6NJJ6 358 aa16.21■□□□□ 0.19
LETM2-215ENST00000530448 PRR29P0C7W0 189 aa16.18■□□□□ 0.18
LETM2-215ENST00000530448 SUPT5HO00267 1087 aaKnown RBP16.17■□□□□ 0.18
LETM2-215ENST00000530448 CSRNP3Q8WYN3 585 aa16.16■□□□□ 0.18
LETM2-215ENST00000530448 CHADLQ6NUI6 762 aa16.15■□□□□ 0.18
LETM2-215ENST00000530448 TTBK1Q5TCY1 1321 aaPredicted RBP16.12■□□□□ 0.17
LETM2-215ENST00000530448 ADGRL1O94910 1474 aa16.1■□□□□ 0.17
LETM2-215ENST00000530448 KIAA0586Q9BVV6 1533 aa16.09■□□□□ 0.17
LETM2-215ENST00000530448 PPRC1Q5VV67 1664 aaKnown RBP16.08■□□□□ 0.17
LETM2-215ENST00000530448 PTPRGP23470 1445 aa16.04■□□□□ 0.16
LETM2-215ENST00000530448 HECW2Q9P2P5 1572 aa16.04■□□□□ 0.16
LETM2-215ENST00000530448 ASXL2Q76L83 1435 aa16.03■□□□□ 0.16
LETM2-215ENST00000530448 ABCC2Q92887 1545 aa16.02■□□□□ 0.15
LETM2-215ENST00000530448 GABBR2O75899 941 aa16.01■□□□□ 0.15
LETM2-215ENST00000530448 COL17A1Q9UMD9 1497 aaPredicted RBP16.01■□□□□ 0.15
LETM2-215ENST00000530448 CUL7Q14999 1698 aa16.01■□□□□ 0.15
LETM2-215ENST00000530448 IGF1RP08069 1367 aa16■□□□□ 0.15
LETM2-215ENST00000530448 GLI2P10070 1586 aa16■□□□□ 0.15
LETM2-215ENST00000530448 PLB1Q6P1J6 1458 aa15.98■□□□□ 0.15
LETM2-215ENST00000530448 TNIKQ9UKE5 1360 aa15.97■□□□□ 0.15
LETM2-215ENST00000530448 KIF27Q86VH2 1401 aa15.94■□□□□ 0.14
LETM2-215ENST00000530448 CARMIL2Q6F5E8 1435 aa15.94■□□□□ 0.14
LETM2-215ENST00000530448 MAP3K4Q9Y6R4 1608 aa15.93■□□□□ 0.14
LETM2-215ENST00000530448 FARP1Q9Y4F1 1045 aaPredicted RBP15.92■□□□□ 0.14
LETM2-215ENST00000530448 EPRSP07814 1512 aaKnown RBP15.92■□□□□ 0.14
LETM2-215ENST00000530448 UHRF1BP1LA0JNW5 1464 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms