RNA–Protein interactions for RNA: ENST00000530448.5

LETM2-215, Transcript of leucine zipper and EF-hand containing transmembrane protein 2, humanhuman

TSL 2

Gene LETM2, Length 650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM2-215ENST00000530448 AEBP2Q6ZN18 517 aaPredicted RBP30.97■■■□□ 2.55
LETM2-215ENST00000530448 CHIC1Q5VXU3 224 aa29.23■■■□□ 2.27
LETM2-215ENST00000530448 SENP3Q9H4L4 574 aaPredicted RBP26.52■■□□□ 1.84
LETM2-215ENST00000530448 PHF23Q9BUL5 403 aaPredicted RBP26.11■■□□□ 1.77
LETM2-215ENST00000530448 FOXD1Q16676 465 aa24.7■■□□□ 1.54
LETM2-215ENST00000530448 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
LETM2-215ENST00000530448 MSH5O43196 834 aa23.25■■□□□ 1.31
LETM2-215ENST00000530448 PIAS4Q8N2W9 510 aaPredicted RBP23.06■■□□□ 1.28
LETM2-215ENST00000530448 POTEDQ86YR6 584 aa23.01■■□□□ 1.27
LETM2-215ENST00000530448 NISCHQ9Y2I1 1504 aa22.99■■□□□ 1.27
LETM2-215ENST00000530448 PPP6R1Q9UPN7 881 aa22.91■■□□□ 1.26
LETM2-215ENST00000530448 ADRA2BP18089 450 aa22.84■■□□□ 1.25
LETM2-215ENST00000530448 ABCC9O60706 1549 aa21.31■■□□□ 1
LETM2-215ENST00000530448 MAPK8IP2Q13387 824 aaPredicted RBP21.04■□□□□ 0.96
LETM2-215ENST00000530448 DMRT2Q9Y5R5 561 aa20.98■□□□□ 0.95
LETM2-215ENST00000530448 SCAF1Q9H7N4 1312 aaKnown RBP20.98■□□□□ 0.95
LETM2-215ENST00000530448 CCDC180Q9P1Z9 1646 aa20.81■□□□□ 0.92
LETM2-215ENST00000530448 DNAJC5BQ9UF47 199 aa20.38■□□□□ 0.85
LETM2-215ENST00000530448 PPP4R3CPQ6ZMV5 832 aa20.37■□□□□ 0.85
LETM2-215ENST00000530448 DCAF8L1A6NGE4 600 aa20.15■□□□□ 0.82
LETM2-215ENST00000530448 HOXD11P31277 338 aaPredicted RBP20.12■□□□□ 0.81
LETM2-215ENST00000530448 CACNB1Q02641 598 aaPredicted RBP20.07■□□□□ 0.8
LETM2-215ENST00000530448 CNKSR2Q8WXI2 1034 aa20.05■□□□□ 0.8
LETM2-215ENST00000530448 RB1CC1Q8TDY2 1594 aa20.02■□□□□ 0.8
LETM2-215ENST00000530448 RNF216Q9NWF9 866 aaPredicted RBP19.93■□□□□ 0.78
LETM2-215ENST00000530448 RNF39Q9H2S5 420 aa19.79■□□□□ 0.76
LETM2-215ENST00000530448 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
LETM2-215ENST00000530448 NACADO15069 1562 aa19.75■□□□□ 0.75
LETM2-215ENST00000530448 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
LETM2-215ENST00000530448 UNC13AQ9UPW8 1703 aa19.65■□□□□ 0.74
LETM2-215ENST00000530448 NCBP3Q53F19 620 aaKnown RBP19.56■□□□□ 0.72
LETM2-215ENST00000530448 C1QBPQ07021 282 aaKnown RBP19.51■□□□□ 0.71
LETM2-215ENST00000530448 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
LETM2-215ENST00000530448 MYO15BQ96JP2 1530 aa19.29■□□□□ 0.68
LETM2-215ENST00000530448 NPM3O75607 178 aaKnown RBP19.23■□□□□ 0.67
LETM2-215ENST00000530448 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
LETM2-215ENST00000530448 CECR2Q9BXF3 1484 aa19.21■□□□□ 0.67
LETM2-215ENST00000530448 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.2■□□□□ 0.66
LETM2-215ENST00000530448 SHROOM4Q9ULL8 1493 aa19.08■□□□□ 0.64
LETM2-215ENST00000530448 EIF4G1Q04637 1599 aaKnown RBP19.04■□□□□ 0.64
LETM2-215ENST00000530448 SCRIBQ14160 1630 aa19.03■□□□□ 0.64
LETM2-215ENST00000530448 DNAJC5Q9H3Z4 198 aa18.97■□□□□ 0.63
LETM2-215ENST00000530448 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
LETM2-215ENST00000530448 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
LETM2-215ENST00000530448 U3KPZ7 1027 aaPredicted RBP18.73■□□□□ 0.59
LETM2-215ENST00000530448 KCNA4P22459 653 aa18.66■□□□□ 0.58
LETM2-215ENST00000530448 CAPN15O75808 1086 aa18.54■□□□□ 0.56
LETM2-215ENST00000530448 SPINK5Q9NQ38 1064 aaPredicted RBP18.52■□□□□ 0.56
LETM2-215ENST00000530448 CUX2O14529 1486 aa18.46■□□□□ 0.55
LETM2-215ENST00000530448 DSG3P32926 999 aa18.46■□□□□ 0.55
LETM2-215ENST00000530448 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
LETM2-215ENST00000530448 SLC4A2P04920 1241 aa18.4■□□□□ 0.54
LETM2-215ENST00000530448 APLP2Q06481 763 aa18.27■□□□□ 0.52
LETM2-215ENST00000530448 NCAPD3P42695 1498 aa18.25■□□□□ 0.51
LETM2-215ENST00000530448 NESP48681 1621 aa18.2■□□□□ 0.5
LETM2-215ENST00000530448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.19■□□□□ 0.5
LETM2-215ENST00000530448 HNRNPUL2Q1KMD3 747 aaKnown RBP18.19■□□□□ 0.5
LETM2-215ENST00000530448 TRHP20396 242 aaPredicted RBP18.18■□□□□ 0.5
LETM2-215ENST00000530448 ATAD2BQ9ULI0 1458 aa18.16■□□□□ 0.5
LETM2-215ENST00000530448 ZNF219Q9P2Y4 722 aaPredicted RBP18.16■□□□□ 0.5
LETM2-215ENST00000530448 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
LETM2-215ENST00000530448 ABCB7O75027 752 aa18.07■□□□□ 0.48
LETM2-215ENST00000530448 SMARCA2P51531 1590 aa18.07■□□□□ 0.48
LETM2-215ENST00000530448 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
LETM2-215ENST00000530448 SAMD1Q6SPF0 538 aaPredicted RBP18.06■□□□□ 0.48
LETM2-215ENST00000530448 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
LETM2-215ENST00000530448 TRIM41Q8WV44 630 aa18.04■□□□□ 0.48
LETM2-215ENST00000530448 POTEHQ6S545 545 aa18.02■□□□□ 0.48
LETM2-215ENST00000530448 BAZ1BQ9UIG0 1483 aaKnown RBP17.98■□□□□ 0.47
LETM2-215ENST00000530448 KIF21AQ7Z4S6 1674 aa17.94■□□□□ 0.46
LETM2-215ENST00000530448 LAMC3Q9Y6N6 1575 aa17.91■□□□□ 0.46
LETM2-215ENST00000530448 BAZ1AQ9NRL2 1556 aaPredicted RBP17.86■□□□□ 0.45
LETM2-215ENST00000530448 PEG3Q9GZU2 1588 aa17.83■□□□□ 0.44
LETM2-215ENST00000530448 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
LETM2-215ENST00000530448 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
LETM2-215ENST00000530448 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
LETM2-215ENST00000530448 MRC2Q9UBG0 1479 aa17.73■□□□□ 0.43
LETM2-215ENST00000530448 WDR62O43379 1518 aa17.69■□□□□ 0.42
LETM2-215ENST00000530448 CADPSQ9ULU8 1353 aa17.68■□□□□ 0.42
LETM2-215ENST00000530448 RBM42Q9BTD8 480 aaKnown RBP17.66■□□□□ 0.42
LETM2-215ENST00000530448 POLA2Q14181 598 aa17.65■□□□□ 0.42
LETM2-215ENST00000530448 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
LETM2-215ENST00000530448 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
LETM2-215ENST00000530448 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
LETM2-215ENST00000530448 WIZO95785 1651 aa17.54■□□□□ 0.4
LETM2-215ENST00000530448 FANCD2Q9BXW9 1451 aa17.51■□□□□ 0.39
LETM2-215ENST00000530448 FOXD4L1Q9NU39 408 aa17.51■□□□□ 0.39
LETM2-215ENST00000530448 RIMBP3CA6NJZ7 1639 aa17.43■□□□□ 0.38
LETM2-215ENST00000530448 RIMBP3BA6NNM3 1639 aa17.43■□□□□ 0.38
LETM2-215ENST00000530448 RIMBP3Q9UFD9 1639 aa17.43■□□□□ 0.38
LETM2-215ENST00000530448 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
LETM2-215ENST00000530448 CFTRP13569 1480 aa17.39■□□□□ 0.37
LETM2-215ENST00000530448 ATF5Q9Y2D1 282 aaPredicted RBP17.38■□□□□ 0.37
LETM2-215ENST00000530448 CHRDL2Q6WN34 429 aa17.33■□□□□ 0.36
LETM2-215ENST00000530448 ARHGEF11O15085 1522 aa17.31■□□□□ 0.36
LETM2-215ENST00000530448 ZBTB12Q9Y330 459 aaPredicted RBP17.31■□□□□ 0.36
LETM2-215ENST00000530448 ZNF608Q9ULD9 1512 aaPredicted RBP17.3■□□□□ 0.36
LETM2-215ENST00000530448 TOP2AP11388 1531 aaKnown RBP17.24■□□□□ 0.35
LETM2-215ENST00000530448 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
LETM2-215ENST00000530448 PRDM2Q13029 1718 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms