RNA–Protein interactions for RNA: ENST00000527528.1

AP003066.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP003066.1, Length 1,647 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003066.1-201ENST00000527528 GRIN2BQ13224 1484 aa13.34□□□□□ -0.27
AP003066.1-201ENST00000527528 CUX1P39880 1505 aa13.34□□□□□ -0.27
AP003066.1-201ENST00000527528 SYNJ1O43426 1573 aa13.33□□□□□ -0.28
AP003066.1-201ENST00000527528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.31□□□□□ -0.28
AP003066.1-201ENST00000527528 CLASP1Q7Z460 1538 aa13.3□□□□□ -0.28
AP003066.1-201ENST00000527528 SYNJ2O15056 1496 aa13.3□□□□□ -0.28
AP003066.1-201ENST00000527528 GAPVD1Q14C86 1478 aa13.27□□□□□ -0.28
AP003066.1-201ENST00000527528 ABCA10Q8WWZ4 1543 aa13.24□□□□□ -0.29
AP003066.1-201ENST00000527528 SUPT5HO00267 1087 aaKnown RBP13.24□□□□□ -0.29
AP003066.1-201ENST00000527528 PBRM1Q86U86 1689 aa13.23□□□□□ -0.29
AP003066.1-201ENST00000527528 ABCA5Q8WWZ7 1642 aa13.2□□□□□ -0.3
AP003066.1-201ENST00000527528 WRNQ14191 1432 aaPredicted RBP eCLIP13.2□□□□□ -0.3
AP003066.1-201ENST00000527528 GRIN2AQ12879 1464 aa13.15□□□□□ -0.3
AP003066.1-201ENST00000527528 ADAMTS12P58397 1594 aa13.12□□□□□ -0.31
AP003066.1-201ENST00000527528 FHAD1B1AJZ9 1412 aa13.11□□□□□ -0.31
AP003066.1-201ENST00000527528 TOP2BQ02880 1626 aa13.11□□□□□ -0.31
AP003066.1-201ENST00000527528 POTEHQ6S545 545 aa13.11□□□□□ -0.31
AP003066.1-201ENST00000527528 BIVM-ERCC5R4GMW8 1640 aa13.1□□□□□ -0.31
AP003066.1-201ENST00000527528 NUP160Q12769 1436 aa13.1□□□□□ -0.31
AP003066.1-201ENST00000527528 CEP170Q5SW79 1584 aa13.08□□□□□ -0.32
AP003066.1-201ENST00000527528 ERICH3Q5RHP9 1530 aa13.07□□□□□ -0.32
AP003066.1-201ENST00000527528 ERCC6L2Q5T890 1561 aa13.06□□□□□ -0.32
AP003066.1-201ENST00000527528 SHROOM2Q13796 1616 aa13.04□□□□□ -0.32
AP003066.1-201ENST00000527528 SLC4A2P04920 1241 aa13.02□□□□□ -0.32
AP003066.1-201ENST00000527528 U3KPZ7 1027 aaPredicted RBP13.02□□□□□ -0.32
AP003066.1-201ENST00000527528 PRG4Q92954 1404 aaPredicted RBP13.01□□□□□ -0.33
AP003066.1-201ENST00000527528 JPH4Q96JJ6 628 aa13□□□□□ -0.33
AP003066.1-201ENST00000527528 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
AP003066.1-201ENST00000527528 SLC4A1APQ9BWU0 796 aaKnown RBP12.96□□□□□ -0.33
AP003066.1-201ENST00000527528 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
AP003066.1-201ENST00000527528 SLC24A1O60721 1099 aa12.92□□□□□ -0.34
AP003066.1-201ENST00000527528 MYT1Q01538 1121 aa12.91□□□□□ -0.34
AP003066.1-201ENST00000527528 KIF27Q86VH2 1401 aa12.9□□□□□ -0.34
AP003066.1-201ENST00000527528 FAM69CQ0P6D2 419 aa12.89□□□□□ -0.35
AP003066.1-201ENST00000527528 KIAA0586Q9BVV6 1533 aa12.88□□□□□ -0.35
AP003066.1-201ENST00000527528 IGF1RP08069 1367 aa12.88□□□□□ -0.35
AP003066.1-201ENST00000527528 KIF13AQ9H1H9 1805 aa12.88□□□□□ -0.35
AP003066.1-201ENST00000527528 CUL7Q14999 1698 aa12.87□□□□□ -0.35
AP003066.1-201ENST00000527528 ABCC10Q5T3U5 1492 aa12.87□□□□□ -0.35
AP003066.1-201ENST00000527528 MAPKBP1O60336 1514 aa12.86□□□□□ -0.35
AP003066.1-201ENST00000527528 ADCY10Q96PN6 1610 aa12.83□□□□□ -0.36
AP003066.1-201ENST00000527528 DIP2BQ9P265 1576 aa12.81□□□□□ -0.36
AP003066.1-201ENST00000527528 PTPRGP23470 1445 aa12.8□□□□□ -0.36
AP003066.1-201ENST00000527528 CARMIL1Q5VZK9 1371 aa12.8□□□□□ -0.36
AP003066.1-201ENST00000527528 CARMIL2Q6F5E8 1435 aa12.8□□□□□ -0.36
AP003066.1-201ENST00000527528 DSG3P32926 999 aa12.8□□□□□ -0.36
AP003066.1-201ENST00000527528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.78□□□□□ -0.36
AP003066.1-201ENST00000527528 HNRNPUL2Q1KMD3 747 aaKnown RBP12.78□□□□□ -0.36
AP003066.1-201ENST00000527528 TNIKQ9UKE5 1360 aa12.78□□□□□ -0.36
AP003066.1-201ENST00000527528 TTBK1Q5TCY1 1321 aaPredicted RBP12.77□□□□□ -0.36
AP003066.1-201ENST00000527528 CAPN15O75808 1086 aa12.77□□□□□ -0.37
AP003066.1-201ENST00000527528 SPINK5Q9NQ38 1064 aaPredicted RBP12.76□□□□□ -0.37
AP003066.1-201ENST00000527528 KDM6BO15054 1643 aa12.76□□□□□ -0.37
AP003066.1-201ENST00000527528 APLP2Q06481 763 aa12.75□□□□□ -0.37
AP003066.1-201ENST00000527528 PELP1Q8IZL8 1130 aaKnown RBP12.74□□□□□ -0.37
AP003066.1-201ENST00000527528 IQGAP2Q13576 1575 aa12.74□□□□□ -0.37
AP003066.1-201ENST00000527528 ABCC2Q92887 1545 aa12.73□□□□□ -0.37
AP003066.1-201ENST00000527528 PLB1Q6P1J6 1458 aa12.72□□□□□ -0.37
AP003066.1-201ENST00000527528 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
AP003066.1-201ENST00000527528 SAMD1Q6SPF0 538 aaPredicted RBP12.71□□□□□ -0.37
AP003066.1-201ENST00000527528 TSPOAP1O95153 1857 aa12.71□□□□□ -0.37
AP003066.1-201ENST00000527528 UACAQ9BZF9 1416 aa12.7□□□□□ -0.38
AP003066.1-201ENST00000527528 UHRF1BP1LA0JNW5 1464 aa12.7□□□□□ -0.38
AP003066.1-201ENST00000527528 FOXD4L1Q9NU39 408 aa12.7□□□□□ -0.38
AP003066.1-201ENST00000527528 ASXL2Q76L83 1435 aa12.69□□□□□ -0.38
AP003066.1-201ENST00000527528 RAPGEF2Q9Y4G8 1499 aa12.68□□□□□ -0.38
AP003066.1-201ENST00000527528 GLI2P10070 1586 aa12.67□□□□□ -0.38
AP003066.1-201ENST00000527528 DISP1Q96F81 1524 aa12.66□□□□□ -0.38
AP003066.1-201ENST00000527528 KDM4FA0A1W2PPD8 638 aa12.66□□□□□ -0.38
AP003066.1-201ENST00000527528 UGGT2Q9NYU1 1516 aa12.65□□□□□ -0.38
AP003066.1-201ENST00000527528 KDM5BQ9UGL1 1544 aa12.63□□□□□ -0.39
AP003066.1-201ENST00000527528 TEX14Q8IWB6 1497 aa12.62□□□□□ -0.39
AP003066.1-201ENST00000527528 EPRSP07814 1512 aaKnown RBP12.61□□□□□ -0.39
AP003066.1-201ENST00000527528 ZNF219Q9P2Y4 722 aaPredicted RBP12.61□□□□□ -0.39
AP003066.1-201ENST00000527528 KIAA0556O60303 1618 aa12.61□□□□□ -0.39
AP003066.1-201ENST00000527528 PPRC1Q5VV67 1664 aaKnown RBP12.59□□□□□ -0.39
AP003066.1-201ENST00000527528 ZCCHC11Q5TAX3 1644 aaKnown RBP12.59□□□□□ -0.39
AP003066.1-201ENST00000527528 GOLGA3Q08378 1498 aa12.59□□□□□ -0.39
AP003066.1-201ENST00000527528 FAM9AQ8IZU1 332 aaPredicted RBP12.58□□□□□ -0.4
AP003066.1-201ENST00000527528 MAP3K4Q9Y6R4 1608 aa12.58□□□□□ -0.4
AP003066.1-201ENST00000527528 WDR7Q9Y4E6 1490 aa12.56□□□□□ -0.4
AP003066.1-201ENST00000527528 ADGRL1O94910 1474 aa12.55□□□□□ -0.4
AP003066.1-201ENST00000527528 CTTNBP2Q8WZ74 1663 aa12.54□□□□□ -0.4
AP003066.1-201ENST00000527528 ZBTB22O15209 634 aa12.54□□□□□ -0.4
AP003066.1-201ENST00000527528 COL17A1Q9UMD9 1497 aaPredicted RBP12.53□□□□□ -0.4
AP003066.1-201ENST00000527528 KCNH8Q96L42 1107 aa12.51□□□□□ -0.41
AP003066.1-201ENST00000527528 CD109Q6YHK3 1445 aa12.51□□□□□ -0.41
AP003066.1-201ENST00000527528 ABCA8O94911 1581 aa12.5□□□□□ -0.41
AP003066.1-201ENST00000527528 PRXQ9BXM0 1461 aa12.5□□□□□ -0.41
AP003066.1-201ENST00000527528 MAGI3Q5TCQ9 1506 aa12.49□□□□□ -0.41
AP003066.1-201ENST00000527528 CFAP43Q8NDM7 1665 aa12.48□□□□□ -0.41
AP003066.1-201ENST00000527528 ABCB7O75027 752 aa12.48□□□□□ -0.41
AP003066.1-201ENST00000527528 P3H3Q8IVL6 736 aa12.44□□□□□ -0.42
AP003066.1-201ENST00000527528 ARID3CA6NKF2 412 aa12.43□□□□□ -0.42
AP003066.1-201ENST00000527528 CSRNP3Q8WYN3 585 aa12.41□□□□□ -0.42
AP003066.1-201ENST00000527528 ATP10BO94823 1461 aa12.4□□□□□ -0.42
AP003066.1-201ENST00000527528 PHLDB1Q86UU1 1377 aa12.4□□□□□ -0.42
AP003066.1-201ENST00000527528 ILDR1Q86SU0 546 aaPredicted RBP12.4□□□□□ -0.42
AP003066.1-201ENST00000527528 HECW2Q9P2P5 1572 aa12.39□□□□□ -0.43
AP003066.1-201ENST00000527528 ARAP3Q8WWN8 1544 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms