RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 FHAD1B1AJZ9 1412 aa11.43□□□□□ -0.58
BDNF-213ENST00000525950 CFAP43Q8NDM7 1665 aa11.43□□□□□ -0.58
BDNF-213ENST00000525950 CCER2I3L3R5 266 aa11.4□□□□□ -0.58
BDNF-213ENST00000525950 WDR97A6NE52 1622 aa11.39□□□□□ -0.59
BDNF-213ENST00000525950 PPP1R15AO75807 674 aaPredicted RBP11.39□□□□□ -0.59
BDNF-213ENST00000525950 CARMIL1Q5VZK9 1371 aa11.39□□□□□ -0.59
BDNF-213ENST00000525950 ANP32EQ9BTT0 268 aa11.38□□□□□ -0.59
BDNF-213ENST00000525950 AQRO60306 1485 aaKnown RBP eCLIP11.38□□□□□ -0.59
BDNF-213ENST00000525950 PHLDB1Q86UU1 1377 aa11.38□□□□□ -0.59
BDNF-213ENST00000525950 EFCAB5A4FU69 1503 aa11.35□□□□□ -0.59
BDNF-213ENST00000525950 FYCO1Q9BQS8 1478 aa11.35□□□□□ -0.59
BDNF-213ENST00000525950 FGD5Q6ZNL6 1462 aa11.34□□□□□ -0.59
BDNF-213ENST00000525950 PCF11O94913 1555 aaKnown RBP11.33□□□□□ -0.6
BDNF-213ENST00000525950 CADPSQ9ULU8 1353 aa11.33□□□□□ -0.6
BDNF-213ENST00000525950 KCNH8Q96L42 1107 aa11.33□□□□□ -0.6
BDNF-213ENST00000525950 CASKIN1Q8WXD9 1431 aa11.32□□□□□ -0.6
BDNF-213ENST00000525950 ITGAEP38570 1179 aa11.32□□□□□ -0.6
BDNF-213ENST00000525950 DDX10Q13206 875 aaKnown RBP11.31□□□□□ -0.6
BDNF-213ENST00000525950 SIN3AQ96ST3 1273 aa11.29□□□□□ -0.6
BDNF-213ENST00000525950 FKBP8Q14318 412 aa11.29□□□□□ -0.6
BDNF-213ENST00000525950 CC2D2AQ9P2K1 1620 aa11.29□□□□□ -0.6
BDNF-213ENST00000525950 ANP32CO43423 234 aa11.28□□□□□ -0.6
BDNF-213ENST00000525950 NEFLP07196 543 aa11.27□□□□□ -0.6
BDNF-213ENST00000525950 ABCA10Q8WWZ4 1543 aa11.27□□□□□ -0.61
BDNF-213ENST00000525950 FAM50AQ14320 339 aaKnown RBP11.27□□□□□ -0.61
BDNF-213ENST00000525950 CUL7Q14999 1698 aa11.27□□□□□ -0.61
BDNF-213ENST00000525950 HFM1A2PYH4 1435 aa11.26□□□□□ -0.61
BDNF-213ENST00000525950 UACAQ9BZF9 1416 aa11.26□□□□□ -0.61
BDNF-213ENST00000525950 FGD6Q6ZV73 1430 aa11.26□□□□□ -0.61
BDNF-213ENST00000525950 FMN1Q68DA7 1419 aa11.25□□□□□ -0.61
BDNF-213ENST00000525950 CTTNBP2Q8WZ74 1663 aa11.24□□□□□ -0.61
BDNF-213ENST00000525950 DNMBPQ6XZF7 1577 aa11.24□□□□□ -0.61
BDNF-213ENST00000525950 CCDC18Q5T9S5 1454 aa11.23□□□□□ -0.61
BDNF-213ENST00000525950 THOC2Q8NI27 1593 aaKnown RBP11.23□□□□□ -0.61
BDNF-213ENST00000525950 SNAPC4Q5SXM2 1469 aa11.22□□□□□ -0.61
BDNF-213ENST00000525950 FHOD3Q2V2M9 1422 aa11.22□□□□□ -0.61
BDNF-213ENST00000525950 TONSLQ96HA7 1378 aa11.22□□□□□ -0.61
BDNF-213ENST00000525950 PTPN23Q9H3S7 1636 aa11.22□□□□□ -0.61
BDNF-213ENST00000525950 RBM19Q9Y4C8 960 aaKnown RBP11.22□□□□□ -0.61
BDNF-213ENST00000525950 ERICH6BQ5W0A0 696 aa11.21□□□□□ -0.61
BDNF-213ENST00000525950 KDM5BQ9UGL1 1544 aa11.2□□□□□ -0.62
BDNF-213ENST00000525950 FANCD2Q9BXW9 1451 aa11.19□□□□□ -0.62
BDNF-213ENST00000525950 SAMD9Q5K651 1589 aa11.19□□□□□ -0.62
BDNF-213ENST00000525950 BCANQ96GW7 911 aa11.19□□□□□ -0.62
BDNF-213ENST00000525950 NAIPQ13075 1403 aa11.18□□□□□ -0.62
BDNF-213ENST00000525950 PTPRKQ15262 1439 aa11.17□□□□□ -0.62
BDNF-213ENST00000525950 MYOM3Q5VTT5 1437 aa11.17□□□□□ -0.62
BDNF-213ENST00000525950 AKNAQ7Z591 1439 aa11.17□□□□□ -0.62
BDNF-213ENST00000525950 POLA1P09884 1462 aaPredicted RBP11.17□□□□□ -0.62
BDNF-213ENST00000525950 ARHGEF11O15085 1522 aa11.16□□□□□ -0.62
BDNF-213ENST00000525950 TOPBP1Q92547 1522 aa11.16□□□□□ -0.62
BDNF-213ENST00000525950 GRIN2BQ13224 1484 aa11.16□□□□□ -0.62
BDNF-213ENST00000525950 EHBP1L1Q8N3D4 1523 aa11.16□□□□□ -0.62
BDNF-213ENST00000525950 FANCIQ9NVI1 1328 aa11.15□□□□□ -0.62
BDNF-213ENST00000525950 KIF21AQ7Z4S6 1674 aa11.15□□□□□ -0.62
BDNF-213ENST00000525950 SUPT6HQ7KZ85 1726 aaKnown RBP11.15□□□□□ -0.62
BDNF-213ENST00000525950 TRIM52Q96A61 297 aa11.15□□□□□ -0.62
BDNF-213ENST00000525950 MTUS2Q5JR59 1369 aa11.15□□□□□ -0.63
BDNF-213ENST00000525950 TCOF1Q13428 1488 aaKnown RBP11.14□□□□□ -0.63
BDNF-213ENST00000525950 NCOA2Q15596 1464 aa11.14□□□□□ -0.63
BDNF-213ENST00000525950 P3H3Q8IVL6 736 aa11.13□□□□□ -0.63
BDNF-213ENST00000525950 HECW1Q76N89 1606 aa11.13□□□□□ -0.63
BDNF-213ENST00000525950 RAD54L2Q9Y4B4 1467 aa11.13□□□□□ -0.63
BDNF-213ENST00000525950 UGGT2Q9NYU1 1516 aa11.13□□□□□ -0.63
BDNF-213ENST00000525950 GCC2Q8IWJ2 1684 aa11.13□□□□□ -0.63
BDNF-213ENST00000525950 LRRIQ1Q96JM4 1722 aa11.12□□□□□ -0.63
BDNF-213ENST00000525950 HIRIP3Q9BW71 556 aaPredicted RBP11.11□□□□□ -0.63
BDNF-213ENST00000525950 ATP1B4Q9UN42 357 aaPredicted RBP11.1□□□□□ -0.63
BDNF-213ENST00000525950 ABCA5Q8WWZ7 1642 aa11.1□□□□□ -0.63
BDNF-213ENST00000525950 CNTLNQ9NXG0 1405 aa11.08□□□□□ -0.64
BDNF-213ENST00000525950 CDK11AQ9UQ88 783 aaPredicted RBP11.08□□□□□ -0.64
BDNF-213ENST00000525950 DENND4BO75064 1496 aaPredicted RBP11.08□□□□□ -0.64
BDNF-213ENST00000525950 WASHC2AQ641Q2 1341 aa11.08□□□□□ -0.64
BDNF-213ENST00000525950 BCL11AQ9H165 835 aa11.07□□□□□ -0.64
BDNF-213ENST00000525950 MIA2Q96PC5 1412 aa11.07□□□□□ -0.64
BDNF-213ENST00000525950 HNRNPUQ00839 825 aaKnown RBP eCLIP11.06□□□□□ -0.64
BDNF-213ENST00000525950 HSPA5P11021 654 aaKnown RBP11.06□□□□□ -0.64
BDNF-213ENST00000525950 EIF4G2P78344 907 aaKnown RBP eCLIP11.06□□□□□ -0.64
BDNF-213ENST00000525950 PPP4R2Q9NY27 417 aa11.06□□□□□ -0.64
BDNF-213ENST00000525950 NCOA1Q15788 1441 aa11.06□□□□□ -0.64
BDNF-213ENST00000525950 MSH5O43196 834 aa11.05□□□□□ -0.64
BDNF-213ENST00000525950 MYT1LQ9UL68 1186 aa11.05□□□□□ -0.64
BDNF-213ENST00000525950 LAMC3Q9Y6N6 1575 aa11.04□□□□□ -0.64
BDNF-213ENST00000525950 POLR1AO95602 1720 aaPredicted RBP11.03□□□□□ -0.64
BDNF-213ENST00000525950 MAGI3Q5TCQ9 1506 aa11.03□□□□□ -0.64
BDNF-213ENST00000525950 GAPVD1Q14C86 1478 aa11.03□□□□□ -0.64
BDNF-213ENST00000525950 ZBED9Q6R2W3 1325 aa11.02□□□□□ -0.65
BDNF-213ENST00000525950 URB2Q14146 1524 aaKnown RBP11.02□□□□□ -0.65
BDNF-213ENST00000525950 ROCK1Q13464 1354 aa11.02□□□□□ -0.65
BDNF-213ENST00000525950 CCDC7Q96M83 1385 aa11.02□□□□□ -0.65
BDNF-213ENST00000525950 PRKRIP1Q9H875 184 aaPredicted RBP11.01□□□□□ -0.65
BDNF-213ENST00000525950 RPRD2Q5VT52 1461 aaKnown RBP11□□□□□ -0.65
BDNF-213ENST00000525950 SPATA31E1Q6ZUB1 1445 aa11□□□□□ -0.65
BDNF-213ENST00000525950 MPHOSPH9Q99550 1183 aa10.99□□□□□ -0.65
BDNF-213ENST00000525950 ANKRD30BQ9BXX2 1392 aa10.98□□□□□ -0.65
BDNF-213ENST00000525950 EPRSP07814 1512 aaKnown RBP10.98□□□□□ -0.65
BDNF-213ENST00000525950 KDM6BO15054 1643 aa10.98□□□□□ -0.65
BDNF-213ENST00000525950 TEX14Q8IWB6 1497 aa10.98□□□□□ -0.65
BDNF-213ENST00000525950 NESP48681 1621 aa10.97□□□□□ -0.65
BDNF-213ENST00000525950 L3MBTL2Q969R5 705 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms