RNA–Protein interactions for RNA: ENST00000525942.1

GRIA4-208, Transcript of glutamate ionotropic receptor AMPA type subunit 4, humanhuman

TSL 1 (best)

Gene GRIA4, Length 513 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4-208ENST00000525942 RIMBP3CA6NJZ7 1639 aa9.86□□□□□ -0.83
GRIA4-208ENST00000525942 RIMBP3BA6NNM3 1639 aa9.86□□□□□ -0.83
GRIA4-208ENST00000525942 RIMBP3Q9UFD9 1639 aa9.86□□□□□ -0.83
GRIA4-208ENST00000525942 ARHGEF11O15085 1522 aa9.84□□□□□ -0.83
GRIA4-208ENST00000525942 EIF4G3O43432 1585 aaKnown RBP9.84□□□□□ -0.83
GRIA4-208ENST00000525942 TARBP1Q13395 1621 aaKnown RBP9.81□□□□□ -0.84
GRIA4-208ENST00000525942 WDR97A6NE52 1622 aa9.79□□□□□ -0.84
GRIA4-208ENST00000525942 AQRO60306 1485 aaKnown RBP eCLIP9.79□□□□□ -0.84
GRIA4-208ENST00000525942 POLA1P09884 1462 aaPredicted RBP9.79□□□□□ -0.84
GRIA4-208ENST00000525942 FBLN2P98095 1184 aa9.78□□□□□ -0.84
GRIA4-208ENST00000525942 CYB5RLQ6IPT4 315 aa9.78□□□□□ -0.84
GRIA4-208ENST00000525942 CHD1O14646 1710 aa9.78□□□□□ -0.84
GRIA4-208ENST00000525942 SOGA1O94964 1423 aa9.77□□□□□ -0.85
GRIA4-208ENST00000525942 RBM42Q9BTD8 480 aaKnown RBP9.76□□□□□ -0.85
GRIA4-208ENST00000525942 CHMP7Q8WUX9 453 aaPredicted RBP9.73□□□□□ -0.85
GRIA4-208ENST00000525942 TDRD9Q8NDG6 1382 aaKnown RBP9.73□□□□□ -0.85
GRIA4-208ENST00000525942 MAGI1Q96QZ7 1491 aaPredicted RBP9.72□□□□□ -0.85
GRIA4-208ENST00000525942 GRIN2BQ13224 1484 aa9.72□□□□□ -0.85
GRIA4-208ENST00000525942 ARAP1Q96P48 1450 aa9.72□□□□□ -0.85
GRIA4-208ENST00000525942 SYNJ1O43426 1573 aa9.71□□□□□ -0.85
GRIA4-208ENST00000525942 FGD5Q6ZNL6 1462 aa9.71□□□□□ -0.86
GRIA4-208ENST00000525942 RAD54L2Q9Y4B4 1467 aa9.71□□□□□ -0.86
GRIA4-208ENST00000525942 SNAPC4Q5SXM2 1469 aa9.69□□□□□ -0.86
GRIA4-208ENST00000525942 SYNJ2O15056 1496 aa9.68□□□□□ -0.86
GRIA4-208ENST00000525942 CLASP1Q7Z460 1538 aa9.67□□□□□ -0.86
GRIA4-208ENST00000525942 SOCS7O14512 581 aa9.67□□□□□ -0.86
GRIA4-208ENST00000525942 CHRDL2Q6WN34 429 aa9.67□□□□□ -0.86
GRIA4-208ENST00000525942 CUX1P39880 1505 aa9.66□□□□□ -0.86
GRIA4-208ENST00000525942 GAPVD1Q14C86 1478 aa9.65□□□□□ -0.87
GRIA4-208ENST00000525942 LMTK3Q96Q04 1460 aa9.63□□□□□ -0.87
GRIA4-208ENST00000525942 ABCA10Q8WWZ4 1543 aa9.62□□□□□ -0.87
GRIA4-208ENST00000525942 PBRM1Q86U86 1689 aa9.61□□□□□ -0.87
GRIA4-208ENST00000525942 WRNQ14191 1432 aaPredicted RBP eCLIP9.6□□□□□ -0.87
GRIA4-208ENST00000525942 ZBTB12Q9Y330 459 aaPredicted RBP9.59□□□□□ -0.87
GRIA4-208ENST00000525942 ABCA5Q8WWZ7 1642 aa9.59□□□□□ -0.87
GRIA4-208ENST00000525942 AKT1S1Q96B36 256 aa9.58□□□□□ -0.88
GRIA4-208ENST00000525942 ATXN8OSP0DMR3 200 aa9.57□□□□□ -0.88
GRIA4-208ENST00000525942 GRIN2AQ12879 1464 aa9.55□□□□□ -0.88
GRIA4-208ENST00000525942 REM2Q8IYK8 340 aaPredicted RBP9.54□□□□□ -0.88
GRIA4-208ENST00000525942 FHAD1B1AJZ9 1412 aa9.54□□□□□ -0.88
GRIA4-208ENST00000525942 SUPT5HO00267 1087 aaKnown RBP9.53□□□□□ -0.88
GRIA4-208ENST00000525942 NUP160Q12769 1436 aa9.53□□□□□ -0.88
GRIA4-208ENST00000525942 TOP2BQ02880 1626 aa9.53□□□□□ -0.88
GRIA4-208ENST00000525942 BIVM-ERCC5R4GMW8 1640 aa9.53□□□□□ -0.88
GRIA4-208ENST00000525942 ERICH3Q5RHP9 1530 aa9.52□□□□□ -0.88
GRIA4-208ENST00000525942 ADAMTS12P58397 1594 aa9.52□□□□□ -0.89
GRIA4-208ENST00000525942 CEP170Q5SW79 1584 aa9.5□□□□□ -0.89
GRIA4-208ENST00000525942 SHROOM2Q13796 1616 aa9.49□□□□□ -0.89
GRIA4-208ENST00000525942 MKRN4PQ13434 485 aaPredicted RBP9.47□□□□□ -0.89
GRIA4-208ENST00000525942 PITPNM1O00562 1244 aa9.46□□□□□ -0.9
GRIA4-208ENST00000525942 NPM1P06748 294 aaKnown RBP eCLIP9.46□□□□□ -0.9
GRIA4-208ENST00000525942 PIP4P2Q8N4L2 257 aa9.46□□□□□ -0.9
GRIA4-208ENST00000525942 JPH4Q96JJ6 628 aa9.46□□□□□ -0.9
GRIA4-208ENST00000525942 PRG4Q92954 1404 aaPredicted RBP9.45□□□□□ -0.9
GRIA4-208ENST00000525942 ERCC6L2Q5T890 1561 aa9.45□□□□□ -0.9
GRIA4-208ENST00000525942 ILDR2Q71H61 639 aa9.44□□□□□ -0.9
GRIA4-208ENST00000525942 FBXO41Q8TF61 875 aa9.43□□□□□ -0.9
GRIA4-208ENST00000525942 FXR2P51116 673 aaKnown RBP eCLIP9.41□□□□□ -0.9
GRIA4-208ENST00000525942 KIF13AQ9H1H9 1805 aa9.39□□□□□ -0.91
GRIA4-208ENST00000525942 MAPKBP1O60336 1514 aa9.38□□□□□ -0.91
GRIA4-208ENST00000525942 RUSC2Q8N2Y8 1516 aa9.38□□□□□ -0.91
GRIA4-208ENST00000525942 KIAA0586Q9BVV6 1533 aa9.38□□□□□ -0.91
GRIA4-208ENST00000525942 KIF27Q86VH2 1401 aa9.38□□□□□ -0.91
GRIA4-208ENST00000525942 CUL7Q14999 1698 aa9.37□□□□□ -0.91
GRIA4-208ENST00000525942 ABCC10Q5T3U5 1492 aa9.37□□□□□ -0.91
GRIA4-208ENST00000525942 FAM69CQ0P6D2 419 aa9.37□□□□□ -0.91
GRIA4-208ENST00000525942 SPDYE2BA6NHP3 402 aa9.35□□□□□ -0.91
GRIA4-208ENST00000525942 SPDYE6P0CI01 402 aa9.35□□□□□ -0.91
GRIA4-208ENST00000525942 SPDYE2Q495Y8 402 aa9.35□□□□□ -0.91
GRIA4-208ENST00000525942 IGF1RP08069 1367 aa9.35□□□□□ -0.91
GRIA4-208ENST00000525942 CARMIL2Q6F5E8 1435 aa9.34□□□□□ -0.91
GRIA4-208ENST00000525942 SP7Q8TDD2 431 aaPredicted RBP9.34□□□□□ -0.91
GRIA4-208ENST00000525942 DIP2BQ9P265 1576 aa9.32□□□□□ -0.92
GRIA4-208ENST00000525942 PTPRGP23470 1445 aa9.31□□□□□ -0.92
GRIA4-208ENST00000525942 ADCY10Q96PN6 1610 aa9.31□□□□□ -0.92
GRIA4-208ENST00000525942 SSUH2Q9Y2M2 353 aa9.31□□□□□ -0.92
GRIA4-208ENST00000525942 CARMIL1Q5VZK9 1371 aa9.29□□□□□ -0.92
GRIA4-208ENST00000525942 TNIKQ9UKE5 1360 aa9.29□□□□□ -0.92
GRIA4-208ENST00000525942 CSRNP3Q8WYN3 585 aa9.29□□□□□ -0.92
GRIA4-208ENST00000525942 KDM6BO15054 1643 aa9.29□□□□□ -0.92
GRIA4-208ENST00000525942 EVX2Q03828 476 aa9.28□□□□□ -0.92
GRIA4-208ENST00000525942 PLB1Q6P1J6 1458 aa9.28□□□□□ -0.92
GRIA4-208ENST00000525942 ABCC2Q92887 1545 aa9.27□□□□□ -0.93
GRIA4-208ENST00000525942 IQGAP2Q13576 1575 aa9.26□□□□□ -0.93
GRIA4-208ENST00000525942 UHRF1BP1LA0JNW5 1464 aa9.26□□□□□ -0.93
GRIA4-208ENST00000525942 DISP3Q9P2K9 1392 aa9.24□□□□□ -0.93
GRIA4-208ENST00000525942 GLI2P10070 1586 aa9.24□□□□□ -0.93
GRIA4-208ENST00000525942 TSPOAP1O95153 1857 aa9.24□□□□□ -0.93
GRIA4-208ENST00000525942 ASXL2Q76L83 1435 aa9.22□□□□□ -0.93
GRIA4-208ENST00000525942 UACAQ9BZF9 1416 aa9.22□□□□□ -0.93
GRIA4-208ENST00000525942 FAM9AQ8IZU1 332 aaPredicted RBP9.22□□□□□ -0.93
GRIA4-208ENST00000525942 TTBK1Q5TCY1 1321 aaPredicted RBP9.21□□□□□ -0.94
GRIA4-208ENST00000525942 TEX14Q8IWB6 1497 aa9.21□□□□□ -0.94
GRIA4-208ENST00000525942 RAPGEF2Q9Y4G8 1499 aa9.21□□□□□ -0.94
GRIA4-208ENST00000525942 KDM4FA0A1W2PPD8 638 aa9.2□□□□□ -0.94
GRIA4-208ENST00000525942 HAX1O00165 279 aa9.2□□□□□ -0.94
GRIA4-208ENST00000525942 ZNF692Q9BU19 519 aaPredicted RBP9.2□□□□□ -0.94
GRIA4-208ENST00000525942 UGGT2Q9NYU1 1516 aa9.2□□□□□ -0.94
GRIA4-208ENST00000525942 KDM5BQ9UGL1 1544 aa9.2□□□□□ -0.94
GRIA4-208ENST00000525942 GOLGA3Q08378 1498 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms