RNA–Protein interactions for RNA: ENST00000525942.1

GRIA4-208, Transcript of glutamate ionotropic receptor AMPA type subunit 4, humanhuman

TSL 1 (best)

Gene GRIA4, Length 513 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4-208ENST00000525942 AEBP2Q6ZN18 517 aaPredicted RBP17.56■□□□□ 0.4
GRIA4-208ENST00000525942 CHIC1Q5VXU3 224 aa16.5■□□□□ 0.23
GRIA4-208ENST00000525942 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
GRIA4-208ENST00000525942 PHF23Q9BUL5 403 aaPredicted RBP14.66□□□□□ -0.06
GRIA4-208ENST00000525942 FOXD1Q16676 465 aa13.92□□□□□ -0.18
GRIA4-208ENST00000525942 NISCHQ9Y2I1 1504 aa13.39□□□□□ -0.27
GRIA4-208ENST00000525942 PLPPR3Q6T4P5 718 aa13.06□□□□□ -0.32
GRIA4-208ENST00000525942 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.33
GRIA4-208ENST00000525942 MSH5O43196 834 aa12.93□□□□□ -0.34
GRIA4-208ENST00000525942 ADRA2BP18089 450 aa12.9□□□□□ -0.34
GRIA4-208ENST00000525942 PIAS4Q8N2W9 510 aaPredicted RBP12.89□□□□□ -0.35
GRIA4-208ENST00000525942 POTEDQ86YR6 584 aa12.85□□□□□ -0.35
GRIA4-208ENST00000525942 CCDC180Q9P1Z9 1646 aa12.11□□□□□ -0.47
GRIA4-208ENST00000525942 ABCC9O60706 1549 aa12.1□□□□□ -0.47
GRIA4-208ENST00000525942 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.5
GRIA4-208ENST00000525942 DMRT2Q9Y5R5 561 aa11.79□□□□□ -0.52
GRIA4-208ENST00000525942 DNAJC5Q9H3Z4 198 aa11.7□□□□□ -0.54
GRIA4-208ENST00000525942 SCAF1Q9H7N4 1312 aaKnown RBP11.61□□□□□ -0.55
GRIA4-208ENST00000525942 DNAJC5BQ9UF47 199 aa11.59□□□□□ -0.55
GRIA4-208ENST00000525942 RB1CC1Q8TDY2 1594 aa11.57□□□□□ -0.56
GRIA4-208ENST00000525942 PPP4R3CPQ6ZMV5 832 aa11.48□□□□□ -0.57
GRIA4-208ENST00000525942 NACADO15069 1562 aa11.48□□□□□ -0.57
GRIA4-208ENST00000525942 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
GRIA4-208ENST00000525942 DCAF8L2P0C7V8 631 aa11.34□□□□□ -0.59
GRIA4-208ENST00000525942 MYO15BQ96JP2 1530 aa11.31□□□□□ -0.6
GRIA4-208ENST00000525942 CNKSR2Q8WXI2 1034 aa11.25□□□□□ -0.61
GRIA4-208ENST00000525942 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
GRIA4-208ENST00000525942 UNC13AQ9UPW8 1703 aa11.21□□□□□ -0.61
GRIA4-208ENST00000525942 RNF216Q9NWF9 866 aaPredicted RBP11.2□□□□□ -0.62
GRIA4-208ENST00000525942 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
GRIA4-208ENST00000525942 BICRAQ9NZM4 1560 aa11.15□□□□□ -0.62
GRIA4-208ENST00000525942 SHROOM4Q9ULL8 1493 aa11.13□□□□□ -0.63
GRIA4-208ENST00000525942 RNF39Q9H2S5 420 aa11.12□□□□□ -0.63
GRIA4-208ENST00000525942 DCAF1Q9Y4B6 1507 aa11.12□□□□□ -0.63
GRIA4-208ENST00000525942 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
GRIA4-208ENST00000525942 ZCCHC6Q5VYS8 1495 aaKnown RBP11.06□□□□□ -0.64
GRIA4-208ENST00000525942 CECR2Q9BXF3 1484 aa10.95□□□□□ -0.66
GRIA4-208ENST00000525942 CC2D2AQ9P2K1 1620 aa10.95□□□□□ -0.66
GRIA4-208ENST00000525942 SCRIBQ14160 1630 aa10.93□□□□□ -0.66
GRIA4-208ENST00000525942 EIF4G1Q04637 1599 aaKnown RBP10.9□□□□□ -0.66
GRIA4-208ENST00000525942 NPM3O75607 178 aaKnown RBP10.9□□□□□ -0.66
GRIA4-208ENST00000525942 NCBP3Q53F19 620 aaKnown RBP10.89□□□□□ -0.67
GRIA4-208ENST00000525942 C1QBPQ07021 282 aaKnown RBP10.87□□□□□ -0.67
GRIA4-208ENST00000525942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.67□□□□□ -0.7
GRIA4-208ENST00000525942 KCNA4P22459 653 aa10.65□□□□□ -0.7
GRIA4-208ENST00000525942 U3KPZ7 1027 aaPredicted RBP10.59□□□□□ -0.71
GRIA4-208ENST00000525942 NCAPD3P42695 1498 aa10.57□□□□□ -0.72
GRIA4-208ENST00000525942 CUX2O14529 1486 aa10.55□□□□□ -0.72
GRIA4-208ENST00000525942 TRIM41Q8WV44 630 aa10.55□□□□□ -0.72
GRIA4-208ENST00000525942 SMARCA2P51531 1590 aa10.52□□□□□ -0.73
GRIA4-208ENST00000525942 ERCC6Q03468 1493 aa10.51□□□□□ -0.73
GRIA4-208ENST00000525942 SLC4A2P04920 1241 aa10.5□□□□□ -0.73
GRIA4-208ENST00000525942 ATAD2BQ9ULI0 1458 aa10.49□□□□□ -0.73
GRIA4-208ENST00000525942 HMGXB3Q12766 1538 aa10.49□□□□□ -0.73
GRIA4-208ENST00000525942 SMARCA4P51532 1647 aa10.46□□□□□ -0.74
GRIA4-208ENST00000525942 SPINK5Q9NQ38 1064 aaPredicted RBP10.45□□□□□ -0.74
GRIA4-208ENST00000525942 BAZ1AQ9NRL2 1556 aaPredicted RBP10.44□□□□□ -0.74
GRIA4-208ENST00000525942 BAZ1BQ9UIG0 1483 aaKnown RBP10.41□□□□□ -0.74
GRIA4-208ENST00000525942 PEG3Q9GZU2 1588 aa10.39□□□□□ -0.75
GRIA4-208ENST00000525942 DSG3P32926 999 aa10.38□□□□□ -0.75
GRIA4-208ENST00000525942 LAMC3Q9Y6N6 1575 aa10.36□□□□□ -0.75
GRIA4-208ENST00000525942 NESP48681 1621 aa10.34□□□□□ -0.75
GRIA4-208ENST00000525942 PDS5BQ9NTI5 1447 aa10.33□□□□□ -0.76
GRIA4-208ENST00000525942 CAPN15O75808 1086 aa10.3□□□□□ -0.76
GRIA4-208ENST00000525942 THOC2Q8NI27 1593 aaKnown RBP10.28□□□□□ -0.76
GRIA4-208ENST00000525942 MROH2BQ7Z745 1585 aa10.27□□□□□ -0.76
GRIA4-208ENST00000525942 ILDR1Q86SU0 546 aaPredicted RBP10.27□□□□□ -0.77
GRIA4-208ENST00000525942 CADPSQ9ULU8 1353 aa10.25□□□□□ -0.77
GRIA4-208ENST00000525942 KIF21AQ7Z4S6 1674 aa10.23□□□□□ -0.77
GRIA4-208ENST00000525942 MRC2Q9UBG0 1479 aa10.2□□□□□ -0.78
GRIA4-208ENST00000525942 WDR62O43379 1518 aa10.16□□□□□ -0.78
GRIA4-208ENST00000525942 CEP164Q9UPV0 1460 aa10.15□□□□□ -0.78
GRIA4-208ENST00000525942 WIZO95785 1651 aa10.14□□□□□ -0.79
GRIA4-208ENST00000525942 ABCB7O75027 752 aa10.13□□□□□ -0.79
GRIA4-208ENST00000525942 TRHP20396 242 aaPredicted RBP10.13□□□□□ -0.79
GRIA4-208ENST00000525942 FANCD2Q9BXW9 1451 aa10.11□□□□□ -0.79
GRIA4-208ENST00000525942 ZNF219Q9P2Y4 722 aaPredicted RBP10.1□□□□□ -0.79
GRIA4-208ENST00000525942 CFTRP13569 1480 aa10.1□□□□□ -0.79
GRIA4-208ENST00000525942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.07□□□□□ -0.8
GRIA4-208ENST00000525942 HNRNPUL2Q1KMD3 747 aaKnown RBP10.07□□□□□ -0.8
GRIA4-208ENST00000525942 OSCARQ8IYS5 282 aa10.07□□□□□ -0.8
GRIA4-208ENST00000525942 TOP2AP11388 1531 aaKnown RBP10.06□□□□□ -0.8
GRIA4-208ENST00000525942 SAMD1Q6SPF0 538 aaPredicted RBP10.05□□□□□ -0.8
GRIA4-208ENST00000525942 RSF1Q96T23 1441 aaPredicted RBP10.05□□□□□ -0.8
GRIA4-208ENST00000525942 APLP2Q06481 763 aa10.03□□□□□ -0.8
GRIA4-208ENST00000525942 POTEHQ6S545 545 aa10.01□□□□□ -0.81
GRIA4-208ENST00000525942 PRDM2Q13029 1718 aa10□□□□□ -0.81
GRIA4-208ENST00000525942 MYCNP04198 464 aaPredicted RBP10□□□□□ -0.81
GRIA4-208ENST00000525942 URB2Q14146 1524 aaKnown RBP9.99□□□□□ -0.81
GRIA4-208ENST00000525942 ABCC8Q09428 1581 aa9.97□□□□□ -0.81
GRIA4-208ENST00000525942 IFT140Q96RY7 1462 aa9.96□□□□□ -0.82
GRIA4-208ENST00000525942 SLC4A1APQ9BWU0 796 aaKnown RBP9.93□□□□□ -0.82
GRIA4-208ENST00000525942 ATF5Q9Y2D1 282 aaPredicted RBP9.93□□□□□ -0.82
GRIA4-208ENST00000525942 CCDC88BA6NC98 1476 aa9.92□□□□□ -0.82
GRIA4-208ENST00000525942 TOPBP1Q92547 1522 aa9.9□□□□□ -0.82
GRIA4-208ENST00000525942 POLA2Q14181 598 aa9.89□□□□□ -0.83
GRIA4-208ENST00000525942 ZBTB22O15209 634 aa9.88□□□□□ -0.83
GRIA4-208ENST00000525942 DNMBPQ6XZF7 1577 aa9.88□□□□□ -0.83
GRIA4-208ENST00000525942 FOXD4L1Q9NU39 408 aa9.87□□□□□ -0.83
GRIA4-208ENST00000525942 ZNF608Q9ULD9 1512 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms