RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
CASP4-205ENST00000525116 OSCARQ8IYS5 282 aa13.2□□□□□ -0.3
CASP4-205ENST00000525116 WDR62O43379 1518 aa13.19□□□□□ -0.3
CASP4-205ENST00000525116 CEP164Q9UPV0 1460 aa13.16□□□□□ -0.3
CASP4-205ENST00000525116 FANCD2Q9BXW9 1451 aa13.14□□□□□ -0.31
CASP4-205ENST00000525116 SSUH2Q9Y2M2 353 aa13.11□□□□□ -0.31
CASP4-205ENST00000525116 STAG3Q9UJ98 1225 aa13.09□□□□□ -0.31
CASP4-205ENST00000525116 IFNLR1Q8IU57 520 aaPredicted RBP13.08□□□□□ -0.32
CASP4-205ENST00000525116 CFTRP13569 1480 aa13.07□□□□□ -0.32
CASP4-205ENST00000525116 RSF1Q96T23 1441 aaPredicted RBP13.05□□□□□ -0.32
CASP4-205ENST00000525116 URB2Q14146 1524 aaKnown RBP13.04□□□□□ -0.32
CASP4-205ENST00000525116 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
CASP4-205ENST00000525116 KLHL34Q8N239 644 aa12.99□□□□□ -0.33
CASP4-205ENST00000525116 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
CASP4-205ENST00000525116 SPOCK2Q92563 424 aa12.93□□□□□ -0.34
CASP4-205ENST00000525116 ZNF608Q9ULD9 1512 aaPredicted RBP12.93□□□□□ -0.34
CASP4-205ENST00000525116 RIMBP3CA6NJZ7 1639 aa12.92□□□□□ -0.34
CASP4-205ENST00000525116 RIMBP3BA6NNM3 1639 aa12.92□□□□□ -0.34
CASP4-205ENST00000525116 RIMBP3Q9UFD9 1639 aa12.92□□□□□ -0.34
CASP4-205ENST00000525116 MIER1Q8N108 512 aa12.91□□□□□ -0.34
CASP4-205ENST00000525116 CCDC88BA6NC98 1476 aa12.91□□□□□ -0.34
CASP4-205ENST00000525116 IFT140Q96RY7 1462 aa12.9□□□□□ -0.34
CASP4-205ENST00000525116 PRDM2Q13029 1718 aa12.89□□□□□ -0.35
CASP4-205ENST00000525116 PLEKHG5O94827 1062 aa12.89□□□□□ -0.35
CASP4-205ENST00000525116 TOPBP1Q92547 1522 aa12.86□□□□□ -0.35
CASP4-205ENST00000525116 ARHGEF11O15085 1522 aa12.85□□□□□ -0.35
CASP4-205ENST00000525116 CYB5RLQ6IPT4 315 aa12.85□□□□□ -0.35
CASP4-205ENST00000525116 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
CASP4-205ENST00000525116 PKD2Q13563 968 aa12.83□□□□□ -0.36
CASP4-205ENST00000525116 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
CASP4-205ENST00000525116 EIF4G3O43432 1585 aaKnown RBP12.81□□□□□ -0.36
CASP4-205ENST00000525116 AQRO60306 1485 aaKnown RBP eCLIP12.81□□□□□ -0.36
CASP4-205ENST00000525116 ABCC8Q09428 1581 aa12.8□□□□□ -0.36
CASP4-205ENST00000525116 DNMBPQ6XZF7 1577 aa12.78□□□□□ -0.36
CASP4-205ENST00000525116 CHD1O14646 1710 aa12.76□□□□□ -0.37
CASP4-205ENST00000525116 TARBP1Q13395 1621 aaKnown RBP12.74□□□□□ -0.37
CASP4-205ENST00000525116 ECM2O94769 699 aaPredicted RBP12.74□□□□□ -0.37
CASP4-205ENST00000525116 AKT1S1Q96B36 256 aa12.73□□□□□ -0.37
CASP4-205ENST00000525116 RAD54L2Q9Y4B4 1467 aa12.72□□□□□ -0.37
CASP4-205ENST00000525116 SPDYE1Q8NFV5 336 aaPredicted RBP12.72□□□□□ -0.37
CASP4-205ENST00000525116 POLA1P09884 1462 aaPredicted RBP12.72□□□□□ -0.37
CASP4-205ENST00000525116 TDRD9Q8NDG6 1382 aaKnown RBP12.71□□□□□ -0.37
CASP4-205ENST00000525116 ARAP1Q96P48 1450 aa12.71□□□□□ -0.38
CASP4-205ENST00000525116 SOGA1O94964 1423 aa12.69□□□□□ -0.38
CASP4-205ENST00000525116 PLCB2Q00722 1185 aa12.67□□□□□ -0.38
CASP4-205ENST00000525116 CHMP7Q8WUX9 453 aaPredicted RBP12.66□□□□□ -0.38
CASP4-205ENST00000525116 CIZ1Q9ULV3 898 aaPredicted RBP12.65□□□□□ -0.38
CASP4-205ENST00000525116 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
CASP4-205ENST00000525116 FGD5Q6ZNL6 1462 aa12.63□□□□□ -0.39
CASP4-205ENST00000525116 CLEC11AQ9Y240 323 aa12.62□□□□□ -0.39
CASP4-205ENST00000525116 PRR29P0C7W0 189 aa12.59□□□□□ -0.39
CASP4-205ENST00000525116 CLASP1Q7Z460 1538 aa12.58□□□□□ -0.4
CASP4-205ENST00000525116 SYNJ1O43426 1573 aa12.58□□□□□ -0.4
CASP4-205ENST00000525116 REM2Q8IYK8 340 aaPredicted RBP12.58□□□□□ -0.4
CASP4-205ENST00000525116 CUX1P39880 1505 aa12.57□□□□□ -0.4
CASP4-205ENST00000525116 GRIN2BQ13224 1484 aa12.57□□□□□ -0.4
CASP4-205ENST00000525116 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
CASP4-205ENST00000525116 MAGI1Q96QZ7 1491 aaPredicted RBP12.56□□□□□ -0.4
CASP4-205ENST00000525116 WDR97A6NE52 1622 aa12.55□□□□□ -0.4
CASP4-205ENST00000525116 SYNJ2O15056 1496 aa12.54□□□□□ -0.4
CASP4-205ENST00000525116 GSE1Q14687 1217 aa12.54□□□□□ -0.4
CASP4-205ENST00000525116 RGL2O15211 777 aa12.53□□□□□ -0.4
CASP4-205ENST00000525116 HAP1P54257 671 aaPredicted RBP12.52□□□□□ -0.41
CASP4-205ENST00000525116 BBXQ8WY36 941 aaPredicted RBP12.51□□□□□ -0.41
CASP4-205ENST00000525116 GAPVD1Q14C86 1478 aa12.51□□□□□ -0.41
CASP4-205ENST00000525116 PBRM1Q86U86 1689 aa12.5□□□□□ -0.41
CASP4-205ENST00000525116 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
CASP4-205ENST00000525116 SUPT5HO00267 1087 aaKnown RBP12.45□□□□□ -0.42
CASP4-205ENST00000525116 NUBP1P53384 320 aa12.45□□□□□ -0.42
CASP4-205ENST00000525116 FAM212AQ96EL1 285 aa12.45□□□□□ -0.42
CASP4-205ENST00000525116 ABCA10Q8WWZ4 1543 aa12.44□□□□□ -0.42
CASP4-205ENST00000525116 DCAF8Q5TAQ9 597 aa12.44□□□□□ -0.42
CASP4-205ENST00000525116 ERCC6L2Q5T890 1561 aa12.43□□□□□ -0.42
CASP4-205ENST00000525116 PITPNM1O00562 1244 aa12.43□□□□□ -0.42
CASP4-205ENST00000525116 ABCA5Q8WWZ7 1642 aa12.43□□□□□ -0.42
CASP4-205ENST00000525116 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
CASP4-205ENST00000525116 GRIN2AQ12879 1464 aa12.4□□□□□ -0.42
CASP4-205ENST00000525116 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
CASP4-205ENST00000525116 PAXIP1Q6ZW49 1069 aaPredicted RBP12.39□□□□□ -0.43
CASP4-205ENST00000525116 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
CASP4-205ENST00000525116 WRNQ14191 1432 aaPredicted RBP eCLIP12.38□□□□□ -0.43
CASP4-205ENST00000525116 CEP170Q5SW79 1584 aa12.38□□□□□ -0.43
CASP4-205ENST00000525116 MNX1P50219 401 aaPredicted RBP12.37□□□□□ -0.43
CASP4-205ENST00000525116 ADAMTS12P58397 1594 aa12.36□□□□□ -0.43
CASP4-205ENST00000525116 CFAP44Q96MT7 982 aa12.36□□□□□ -0.43
CASP4-205ENST00000525116 NUP160Q12769 1436 aa12.35□□□□□ -0.43
CASP4-205ENST00000525116 FHAD1B1AJZ9 1412 aa12.34□□□□□ -0.43
CASP4-205ENST00000525116 VSIG10Q8N0Z9 540 aa12.33□□□□□ -0.44
CASP4-205ENST00000525116 SPRYD3Q8NCJ5 442 aa12.33□□□□□ -0.44
CASP4-205ENST00000525116 TOP2BQ02880 1626 aa12.31□□□□□ -0.44
CASP4-205ENST00000525116 RIOK3O14730 519 aaKnown RBP12.31□□□□□ -0.44
CASP4-205ENST00000525116 HS6ST3Q8IZP7 471 aa12.31□□□□□ -0.44
CASP4-205ENST00000525116 SHROOM2Q13796 1616 aa12.3□□□□□ -0.44
CASP4-205ENST00000525116 PRG4Q92954 1404 aaPredicted RBP12.3□□□□□ -0.44
CASP4-205ENST00000525116 BIVM-ERCC5R4GMW8 1640 aa12.29□□□□□ -0.44
CASP4-205ENST00000525116 RASEFQ8IZ41 740 aa12.29□□□□□ -0.44
CASP4-205ENST00000525116 JPH4Q96JJ6 628 aa12.29□□□□□ -0.44
CASP4-205ENST00000525116 RNF25Q96BH1 459 aaPredicted RBP12.28□□□□□ -0.44
CASP4-205ENST00000525116 ERICH3Q5RHP9 1530 aa12.27□□□□□ -0.44
CASP4-205ENST00000525116 CHRM1P11229 460 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms