RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 CHIC1Q5VXU3 224 aa22.6■■□□□ 1.21
CASP4-205ENST00000525116 AEBP2Q6ZN18 517 aaPredicted RBP22.57■■□□□ 1.2
CASP4-205ENST00000525116 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
CASP4-205ENST00000525116 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
CASP4-205ENST00000525116 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
CASP4-205ENST00000525116 FOXD1Q16676 465 aa17.69■□□□□ 0.42
CASP4-205ENST00000525116 ADRA2BP18089 450 aa17.41■□□□□ 0.38
CASP4-205ENST00000525116 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
CASP4-205ENST00000525116 NISCHQ9Y2I1 1504 aa17.34■□□□□ 0.37
CASP4-205ENST00000525116 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
CASP4-205ENST00000525116 KCNA4P22459 653 aa16.58■□□□□ 0.24
CASP4-205ENST00000525116 PPP4R3CPQ6ZMV5 832 aa16.44■□□□□ 0.22
CASP4-205ENST00000525116 NCBP3Q53F19 620 aaKnown RBP16.25■□□□□ 0.19
CASP4-205ENST00000525116 MSH5O43196 834 aa16.22■□□□□ 0.19
CASP4-205ENST00000525116 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
CASP4-205ENST00000525116 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
CASP4-205ENST00000525116 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
CASP4-205ENST00000525116 CNKSR2Q8WXI2 1034 aa15.91■□□□□ 0.14
CASP4-205ENST00000525116 NPM3O75607 178 aaKnown RBP15.9■□□□□ 0.14
CASP4-205ENST00000525116 ABCC9O60706 1549 aa15.88■□□□□ 0.13
CASP4-205ENST00000525116 MAPK8IP2Q13387 824 aaPredicted RBP15.62■□□□□ 0.09
CASP4-205ENST00000525116 CCDC180Q9P1Z9 1646 aa15.59■□□□□ 0.09
CASP4-205ENST00000525116 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
CASP4-205ENST00000525116 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.07
CASP4-205ENST00000525116 DMRT2Q9Y5R5 561 aa15.38■□□□□ 0.05
CASP4-205ENST00000525116 DNAJC5BQ9UF47 199 aa15.37■□□□□ 0.05
CASP4-205ENST00000525116 HOXD11P31277 338 aaPredicted RBP15.24■□□□□ 0.03
CASP4-205ENST00000525116 ZBTB22O15209 634 aa15.21■□□□□ 0.03
CASP4-205ENST00000525116 FOXD4L1Q9NU39 408 aa15.18■□□□□ 0.02
CASP4-205ENST00000525116 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
CASP4-205ENST00000525116 DCAF8L2P0C7V8 631 aa14.88□□□□□ -0.03
CASP4-205ENST00000525116 SLC4A2P04920 1241 aa14.85□□□□□ -0.03
CASP4-205ENST00000525116 PABPN1Q86U42 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
CASP4-205ENST00000525116 NACADO15069 1562 aa14.8□□□□□ -0.04
CASP4-205ENST00000525116 DCAF8L1A6NGE4 600 aa14.75□□□□□ -0.05
CASP4-205ENST00000525116 MYCNP04198 464 aaPredicted RBP14.75□□□□□ -0.05
CASP4-205ENST00000525116 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
CASP4-205ENST00000525116 ATXN8OSP0DMR3 200 aa14.62□□□□□ -0.07
CASP4-205ENST00000525116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.59□□□□□ -0.07
CASP4-205ENST00000525116 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
CASP4-205ENST00000525116 MYO15BQ96JP2 1530 aa14.48□□□□□ -0.09
CASP4-205ENST00000525116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.46□□□□□ -0.09
CASP4-205ENST00000525116 HNRNPUL2Q1KMD3 747 aaKnown RBP14.46□□□□□ -0.09
CASP4-205ENST00000525116 SAMD1Q6SPF0 538 aaPredicted RBP14.39□□□□□ -0.11
CASP4-205ENST00000525116 U3KPZ7 1027 aaPredicted RBP14.34□□□□□ -0.11
CASP4-205ENST00000525116 ZCCHC6Q5VYS8 1495 aaKnown RBP14.31□□□□□ -0.12
CASP4-205ENST00000525116 CECR2Q9BXF3 1484 aa14.3□□□□□ -0.12
CASP4-205ENST00000525116 CC2D2AQ9P2K1 1620 aa14.29□□□□□ -0.12
CASP4-205ENST00000525116 SCRIBQ14160 1630 aa14.28□□□□□ -0.12
CASP4-205ENST00000525116 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
CASP4-205ENST00000525116 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
CASP4-205ENST00000525116 APLP2Q06481 763 aa14.23□□□□□ -0.13
CASP4-205ENST00000525116 EIF4G1Q04637 1599 aaKnown RBP14.2□□□□□ -0.14
CASP4-205ENST00000525116 ATF5Q9Y2D1 282 aaPredicted RBP14.19□□□□□ -0.14
CASP4-205ENST00000525116 FKBP8Q14318 412 aa14.1□□□□□ -0.15
CASP4-205ENST00000525116 ZNF219Q9P2Y4 722 aaPredicted RBP14□□□□□ -0.17
CASP4-205ENST00000525116 DNAJC5Q9H3Z4 198 aa13.94□□□□□ -0.18
CASP4-205ENST00000525116 RNF39Q9H2S5 420 aa13.88□□□□□ -0.19
CASP4-205ENST00000525116 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
CASP4-205ENST00000525116 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
CASP4-205ENST00000525116 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
CASP4-205ENST00000525116 CAPN15O75808 1086 aa13.78□□□□□ -0.2
CASP4-205ENST00000525116 SPINK5Q9NQ38 1064 aaPredicted RBP13.78□□□□□ -0.2
CASP4-205ENST00000525116 AMER1Q5JTC6 1135 aaPredicted RBP13.77□□□□□ -0.21
CASP4-205ENST00000525116 FBLN2P98095 1184 aa13.73□□□□□ -0.21
CASP4-205ENST00000525116 ERCC6Q03468 1493 aa13.71□□□□□ -0.21
CASP4-205ENST00000525116 POLA2Q14181 598 aa13.69□□□□□ -0.22
CASP4-205ENST00000525116 NCAPD3P42695 1498 aa13.68□□□□□ -0.22
CASP4-205ENST00000525116 CUX2O14529 1486 aa13.67□□□□□ -0.22
CASP4-205ENST00000525116 RTN4Q9NQC3 1192 aaKnown RBP13.65□□□□□ -0.22
CASP4-205ENST00000525116 SPDYE4A6NLX3 237 aa13.64□□□□□ -0.23
CASP4-205ENST00000525116 ATAD2BQ9ULI0 1458 aa13.63□□□□□ -0.23
CASP4-205ENST00000525116 MKRN4PQ13434 485 aaPredicted RBP13.62□□□□□ -0.23
CASP4-205ENST00000525116 ZBTB12Q9Y330 459 aaPredicted RBP13.6□□□□□ -0.23
CASP4-205ENST00000525116 NESP48681 1621 aa13.58□□□□□ -0.24
CASP4-205ENST00000525116 SMARCA4P51532 1647 aa13.57□□□□□ -0.24
CASP4-205ENST00000525116 SMARCA2P51531 1590 aa13.56□□□□□ -0.24
CASP4-205ENST00000525116 FBXO3Q9UK99 471 aa13.55□□□□□ -0.24
CASP4-205ENST00000525116 HMGXB3Q12766 1538 aa13.53□□□□□ -0.24
CASP4-205ENST00000525116 ABCB7O75027 752 aa13.52□□□□□ -0.25
CASP4-205ENST00000525116 BAZ1BQ9UIG0 1483 aaKnown RBP13.5□□□□□ -0.25
CASP4-205ENST00000525116 BAZ1AQ9NRL2 1556 aaPredicted RBP13.46□□□□□ -0.25
CASP4-205ENST00000525116 PROM2Q8N271 834 aa13.42□□□□□ -0.26
CASP4-205ENST00000525116 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
CASP4-205ENST00000525116 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
CASP4-205ENST00000525116 LAMC3Q9Y6N6 1575 aa13.39□□□□□ -0.27
CASP4-205ENST00000525116 PEG3Q9GZU2 1588 aa13.38□□□□□ -0.27
CASP4-205ENST00000525116 DSG3P32926 999 aa13.37□□□□□ -0.27
CASP4-205ENST00000525116 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
CASP4-205ENST00000525116 PDS5BQ9NTI5 1447 aa13.35□□□□□ -0.27
CASP4-205ENST00000525116 TRIM41Q8WV44 630 aa13.34□□□□□ -0.27
CASP4-205ENST00000525116 VASPP50552 380 aaPredicted RBP13.28□□□□□ -0.28
CASP4-205ENST00000525116 CADPSQ9ULU8 1353 aa13.28□□□□□ -0.28
CASP4-205ENST00000525116 MRC2Q9UBG0 1479 aa13.24□□□□□ -0.29
CASP4-205ENST00000525116 ZNF692Q9BU19 519 aaPredicted RBP13.23□□□□□ -0.29
CASP4-205ENST00000525116 WIZO95785 1651 aa13.23□□□□□ -0.29
CASP4-205ENST00000525116 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
CASP4-205ENST00000525116 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
CASP4-205ENST00000525116 SPDYE2Q495Y8 402 aa13.22□□□□□ -0.29
CASP4-205ENST00000525116 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms