RNA–Protein interactions for RNA: ENST00000523928.1

NIPA2P4-201, Transcript of NIPA magnesium transporter 2 pseudogene 4, humanhuman

BASIC

Gene NIPA2P4, Length 1,341 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPA2P4-201ENST00000523928 FANCD2Q9BXW9 1451 aa17.26■□□□□ 0.35
NIPA2P4-201ENST00000523928 FXR2P51116 673 aaKnown RBP eCLIP17.25■□□□□ 0.35
NIPA2P4-201ENST00000523928 SP7Q8TDD2 431 aaPredicted RBP17.17■□□□□ 0.34
NIPA2P4-201ENST00000523928 CFTRP13569 1480 aa17.15■□□□□ 0.34
NIPA2P4-201ENST00000523928 URB2Q14146 1524 aaKnown RBP17.14■□□□□ 0.34
NIPA2P4-201ENST00000523928 CSRNP3Q8WYN3 585 aa17.13■□□□□ 0.33
NIPA2P4-201ENST00000523928 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
NIPA2P4-201ENST00000523928 SSUH2Q9Y2M2 353 aa17.13■□□□□ 0.33
NIPA2P4-201ENST00000523928 PRDM2Q13029 1718 aa17.12■□□□□ 0.33
NIPA2P4-201ENST00000523928 RIMBP3CA6NJZ7 1639 aa17.12■□□□□ 0.33
NIPA2P4-201ENST00000523928 RIMBP3BA6NNM3 1639 aa17.12■□□□□ 0.33
NIPA2P4-201ENST00000523928 RIMBP3Q9UFD9 1639 aa17.12■□□□□ 0.33
NIPA2P4-201ENST00000523928 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
NIPA2P4-201ENST00000523928 HAX1O00165 279 aa17.07■□□□□ 0.32
NIPA2P4-201ENST00000523928 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
NIPA2P4-201ENST00000523928 CLEC11AQ9Y240 323 aa17.03■□□□□ 0.32
NIPA2P4-201ENST00000523928 RSF1Q96T23 1441 aaPredicted RBP17■□□□□ 0.31
NIPA2P4-201ENST00000523928 ARHGEF11O15085 1522 aa16.99■□□□□ 0.31
NIPA2P4-201ENST00000523928 ZNF608Q9ULD9 1512 aaPredicted RBP16.98■□□□□ 0.31
NIPA2P4-201ENST00000523928 IFT140Q96RY7 1462 aa16.98■□□□□ 0.31
NIPA2P4-201ENST00000523928 PRKAR2AP13861 404 aaKnown RBP16.94■□□□□ 0.3
NIPA2P4-201ENST00000523928 EIF4G3O43432 1585 aaKnown RBP16.93■□□□□ 0.3
NIPA2P4-201ENST00000523928 CHD1O14646 1710 aa16.91■□□□□ 0.3
NIPA2P4-201ENST00000523928 TOPBP1Q92547 1522 aa16.9■□□□□ 0.3
NIPA2P4-201ENST00000523928 EVX2Q03828 476 aa16.86■□□□□ 0.29
NIPA2P4-201ENST00000523928 EHMT2Q96KQ7 1210 aa16.86■□□□□ 0.29
NIPA2P4-201ENST00000523928 DNMBPQ6XZF7 1577 aa16.84■□□□□ 0.29
NIPA2P4-201ENST00000523928 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
NIPA2P4-201ENST00000523928 ABCC8Q09428 1581 aa16.83■□□□□ 0.28
NIPA2P4-201ENST00000523928 CYB5RLQ6IPT4 315 aa16.82■□□□□ 0.28
NIPA2P4-201ENST00000523928 ARAP1Q96P48 1450 aa16.8■□□□□ 0.28
NIPA2P4-201ENST00000523928 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
NIPA2P4-201ENST00000523928 AQRO60306 1485 aaKnown RBP eCLIP16.76■□□□□ 0.27
NIPA2P4-201ENST00000523928 PRR29P0C7W0 189 aa16.75■□□□□ 0.27
NIPA2P4-201ENST00000523928 CHADLQ6NUI6 762 aa16.72■□□□□ 0.27
NIPA2P4-201ENST00000523928 C19orf67A6NJJ6 358 aa16.7■□□□□ 0.26
NIPA2P4-201ENST00000523928 POLA1P09884 1462 aaPredicted RBP16.69■□□□□ 0.26
NIPA2P4-201ENST00000523928 RAD54L2Q9Y4B4 1467 aa16.64■□□□□ 0.25
NIPA2P4-201ENST00000523928 CLASP1Q7Z460 1538 aa16.63■□□□□ 0.25
NIPA2P4-201ENST00000523928 SNAPC4Q5SXM2 1469 aa16.63■□□□□ 0.25
NIPA2P4-201ENST00000523928 SYNJ1O43426 1573 aa16.62■□□□□ 0.25
NIPA2P4-201ENST00000523928 WDR97A6NE52 1622 aa16.61■□□□□ 0.25
NIPA2P4-201ENST00000523928 TDRD9Q8NDG6 1382 aaKnown RBP16.6■□□□□ 0.25
NIPA2P4-201ENST00000523928 SOGA1O94964 1423 aa16.58■□□□□ 0.25
NIPA2P4-201ENST00000523928 FGD5Q6ZNL6 1462 aa16.56■□□□□ 0.24
NIPA2P4-201ENST00000523928 MAGI1Q96QZ7 1491 aaPredicted RBP16.56■□□□□ 0.24
NIPA2P4-201ENST00000523928 CHMP7Q8WUX9 453 aaPredicted RBP16.53■□□□□ 0.24
NIPA2P4-201ENST00000523928 PBRM1Q86U86 1689 aa16.52■□□□□ 0.24
NIPA2P4-201ENST00000523928 GRIN2BQ13224 1484 aa16.51■□□□□ 0.23
NIPA2P4-201ENST00000523928 SYNJ2O15056 1496 aa16.49■□□□□ 0.23
NIPA2P4-201ENST00000523928 CUX1P39880 1505 aa16.49■□□□□ 0.23
NIPA2P4-201ENST00000523928 FARP1Q9Y4F1 1045 aaPredicted RBP16.48■□□□□ 0.23
NIPA2P4-201ENST00000523928 GABBR2O75899 941 aa16.47■□□□□ 0.23
NIPA2P4-201ENST00000523928 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
NIPA2P4-201ENST00000523928 SPDYE4A6NLX3 237 aa16.45■□□□□ 0.22
NIPA2P4-201ENST00000523928 CD44P16070 742 aaKnown RBP16.4■□□□□ 0.22
NIPA2P4-201ENST00000523928 STAG3Q9UJ98 1225 aa16.4■□□□□ 0.22
NIPA2P4-201ENST00000523928 ABCA5Q8WWZ7 1642 aa16.38■□□□□ 0.21
NIPA2P4-201ENST00000523928 ABCA10Q8WWZ4 1543 aa16.34■□□□□ 0.21
NIPA2P4-201ENST00000523928 ERCC6L2Q5T890 1561 aa16.34■□□□□ 0.21
NIPA2P4-201ENST00000523928 CREBZFQ9NS37 354 aa16.32■□□□□ 0.2
NIPA2P4-201ENST00000523928 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
NIPA2P4-201ENST00000523928 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
NIPA2P4-201ENST00000523928 CEP170Q5SW79 1584 aa16.3■□□□□ 0.2
NIPA2P4-201ENST00000523928 KIF13AQ9H1H9 1805 aa16.28■□□□□ 0.2
NIPA2P4-201ENST00000523928 SHROOM2Q13796 1616 aa16.25■□□□□ 0.19
NIPA2P4-201ENST00000523928 NUP160Q12769 1436 aa16.25■□□□□ 0.19
NIPA2P4-201ENST00000523928 CLCN6P51797 869 aa16.19■□□□□ 0.18
NIPA2P4-201ENST00000523928 WRNQ14191 1432 aaPredicted RBP eCLIP16.19■□□□□ 0.18
NIPA2P4-201ENST00000523928 BIVM-ERCC5R4GMW8 1640 aa16.18■□□□□ 0.18
NIPA2P4-201ENST00000523928 FHAD1B1AJZ9 1412 aa16.18■□□□□ 0.18
NIPA2P4-201ENST00000523928 ZNF579Q8NAF0 562 aaKnown RBP16.15■□□□□ 0.18
NIPA2P4-201ENST00000523928 ZRANB1Q9UGI0 708 aa16.15■□□□□ 0.18
NIPA2P4-201ENST00000523928 TOP2BQ02880 1626 aa16.14■□□□□ 0.17
NIPA2P4-201ENST00000523928 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.17
NIPA2P4-201ENST00000523928 POTEIP0CG38 1075 aa16.13■□□□□ 0.17
NIPA2P4-201ENST00000523928 PRG4Q92954 1404 aaPredicted RBP16.12■□□□□ 0.17
NIPA2P4-201ENST00000523928 LHX8Q68G74 356 aa16.1■□□□□ 0.17
NIPA2P4-201ENST00000523928 RUSC2Q8N2Y8 1516 aa16.08■□□□□ 0.17
NIPA2P4-201ENST00000523928 DIP2BQ9P265 1576 aa16.06■□□□□ 0.16
NIPA2P4-201ENST00000523928 ABCC10Q5T3U5 1492 aa16.06■□□□□ 0.16
NIPA2P4-201ENST00000523928 PROM2Q8N271 834 aa16.05■□□□□ 0.16
NIPA2P4-201ENST00000523928 MAPKBP1O60336 1514 aa16.05■□□□□ 0.16
NIPA2P4-201ENST00000523928 TSPOAP1O95153 1857 aa16.04■□□□□ 0.16
NIPA2P4-201ENST00000523928 MNX1P50219 401 aaPredicted RBP16.04■□□□□ 0.16
NIPA2P4-201ENST00000523928 FAM69CQ0P6D2 419 aa16.04■□□□□ 0.16
NIPA2P4-201ENST00000523928 KDM6BO15054 1643 aa16.04■□□□□ 0.16
NIPA2P4-201ENST00000523928 ADCY10Q96PN6 1610 aa16.04■□□□□ 0.16
NIPA2P4-201ENST00000523928 JPH4Q96JJ6 628 aa16.02■□□□□ 0.16
NIPA2P4-201ENST00000523928 SUPT5HO00267 1087 aaKnown RBP16.01■□□□□ 0.15
NIPA2P4-201ENST00000523928 NPM1P06748 294 aaKnown RBP eCLIP16.01■□□□□ 0.15
NIPA2P4-201ENST00000523928 DCBLD2Q96PD2 775 aa16.01■□□□□ 0.15
NIPA2P4-201ENST00000523928 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
NIPA2P4-201ENST00000523928 GALR2O43603 387 aaPredicted RBP15.94■□□□□ 0.14
NIPA2P4-201ENST00000523928 PHF12Q96QT6 1004 aa15.92■□□□□ 0.14
NIPA2P4-201ENST00000523928 KDM4FA0A1W2PPD8 638 aa15.9■□□□□ 0.14
NIPA2P4-201ENST00000523928 CUL7Q14999 1698 aa15.89■□□□□ 0.14
NIPA2P4-201ENST00000523928 KIAA0586Q9BVV6 1533 aa15.89■□□□□ 0.13
NIPA2P4-201ENST00000523928 PPRC1Q5VV67 1664 aaKnown RBP15.84■□□□□ 0.13
NIPA2P4-201ENST00000523928 PTPRGP23470 1445 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms