RNA–Protein interactions for RNA: ENST00000523336.1

AF279873.3-204, humanhuman

TSL 2 BASIC

Gene AF279873.3, Length 784 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF279873.3-204ENST00000523336 TOPBP1Q92547 1522 aa13.04□□□□□ -0.32
AF279873.3-204ENST00000523336 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
AF279873.3-204ENST00000523336 REM2Q8IYK8 340 aaPredicted RBP13.02□□□□□ -0.33
AF279873.3-204ENST00000523336 ZBTB12Q9Y330 459 aaPredicted RBP13.02□□□□□ -0.33
AF279873.3-204ENST00000523336 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.33
AF279873.3-204ENST00000523336 ATXN8OSP0DMR3 200 aa12.98□□□□□ -0.33
AF279873.3-204ENST00000523336 CUX1P39880 1505 aa12.98□□□□□ -0.33
AF279873.3-204ENST00000523336 MKRN4PQ13434 485 aaPredicted RBP12.94□□□□□ -0.34
AF279873.3-204ENST00000523336 PITPNM1O00562 1244 aa12.93□□□□□ -0.34
AF279873.3-204ENST00000523336 PIP4P2Q8N4L2 257 aa12.93□□□□□ -0.34
AF279873.3-204ENST00000523336 WRNQ14191 1432 aaPredicted RBP eCLIP12.92□□□□□ -0.34
AF279873.3-204ENST00000523336 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
AF279873.3-204ENST00000523336 IFT140Q96RY7 1462 aa12.91□□□□□ -0.34
AF279873.3-204ENST00000523336 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
AF279873.3-204ENST00000523336 SOGA1O94964 1423 aa12.89□□□□□ -0.35
AF279873.3-204ENST00000523336 BIVM-ERCC5R4GMW8 1640 aa12.89□□□□□ -0.35
AF279873.3-204ENST00000523336 RAD54L2Q9Y4B4 1467 aa12.89□□□□□ -0.35
AF279873.3-204ENST00000523336 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
AF279873.3-204ENST00000523336 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
AF279873.3-204ENST00000523336 TARBP1Q13395 1621 aaKnown RBP12.88□□□□□ -0.35
AF279873.3-204ENST00000523336 ZNF608Q9ULD9 1512 aaPredicted RBP12.87□□□□□ -0.35
AF279873.3-204ENST00000523336 RIMBP3CA6NJZ7 1639 aa12.85□□□□□ -0.35
AF279873.3-204ENST00000523336 RIMBP3BA6NNM3 1639 aa12.85□□□□□ -0.35
AF279873.3-204ENST00000523336 RIMBP3Q9UFD9 1639 aa12.85□□□□□ -0.35
AF279873.3-204ENST00000523336 FXR2P51116 673 aaKnown RBP eCLIP12.83□□□□□ -0.36
AF279873.3-204ENST00000523336 AQRO60306 1485 aaKnown RBP eCLIP12.82□□□□□ -0.36
AF279873.3-204ENST00000523336 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
AF279873.3-204ENST00000523336 WDR97A6NE52 1622 aa12.8□□□□□ -0.36
AF279873.3-204ENST00000523336 ABCA10Q8WWZ4 1543 aa12.79□□□□□ -0.36
AF279873.3-204ENST00000523336 EIF4G3O43432 1585 aaKnown RBP12.79□□□□□ -0.36
AF279873.3-204ENST00000523336 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
AF279873.3-204ENST00000523336 ARHGEF11O15085 1522 aa12.76□□□□□ -0.37
AF279873.3-204ENST00000523336 GAPVD1Q14C86 1478 aa12.73□□□□□ -0.37
AF279873.3-204ENST00000523336 SPDYE2BA6NHP3 402 aa12.73□□□□□ -0.37
AF279873.3-204ENST00000523336 SPDYE6P0CI01 402 aa12.73□□□□□ -0.37
AF279873.3-204ENST00000523336 SPDYE2Q495Y8 402 aa12.73□□□□□ -0.37
AF279873.3-204ENST00000523336 ABCA5Q8WWZ7 1642 aa12.73□□□□□ -0.37
AF279873.3-204ENST00000523336 EVX2Q03828 476 aa12.72□□□□□ -0.37
AF279873.3-204ENST00000523336 PBRM1Q86U86 1689 aa12.72□□□□□ -0.37
AF279873.3-204ENST00000523336 GRIN2BQ13224 1484 aa12.71□□□□□ -0.38
AF279873.3-204ENST00000523336 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
AF279873.3-204ENST00000523336 SNAPC4Q5SXM2 1469 aa12.67□□□□□ -0.38
AF279873.3-204ENST00000523336 FBLN2P98095 1184 aa12.67□□□□□ -0.38
AF279873.3-204ENST00000523336 CYB5RLQ6IPT4 315 aa12.67□□□□□ -0.38
AF279873.3-204ENST00000523336 CHD1O14646 1710 aa12.67□□□□□ -0.38
AF279873.3-204ENST00000523336 ARAP1Q96P48 1450 aa12.65□□□□□ -0.38
AF279873.3-204ENST00000523336 MAGI1Q96QZ7 1491 aaPredicted RBP12.65□□□□□ -0.38
AF279873.3-204ENST00000523336 KIF27Q86VH2 1401 aa12.64□□□□□ -0.39
AF279873.3-204ENST00000523336 ERICH3Q5RHP9 1530 aa12.63□□□□□ -0.39
AF279873.3-204ENST00000523336 CHMP7Q8WUX9 453 aaPredicted RBP12.62□□□□□ -0.39
AF279873.3-204ENST00000523336 IGF1RP08069 1367 aa12.61□□□□□ -0.39
AF279873.3-204ENST00000523336 SYNJ2O15056 1496 aa12.6□□□□□ -0.39
AF279873.3-204ENST00000523336 RUSC2Q8N2Y8 1516 aa12.6□□□□□ -0.39
AF279873.3-204ENST00000523336 ADAMTS12P58397 1594 aa12.59□□□□□ -0.39
AF279873.3-204ENST00000523336 FHAD1B1AJZ9 1412 aa12.58□□□□□ -0.4
AF279873.3-204ENST00000523336 HAX1O00165 279 aa12.57□□□□□ -0.4
AF279873.3-204ENST00000523336 GRIN2AQ12879 1464 aa12.54□□□□□ -0.4
AF279873.3-204ENST00000523336 CUL7Q14999 1698 aa12.54□□□□□ -0.4
AF279873.3-204ENST00000523336 CARMIL1Q5VZK9 1371 aa12.54□□□□□ -0.4
AF279873.3-204ENST00000523336 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
AF279873.3-204ENST00000523336 PRKAR2AP13861 404 aaKnown RBP12.51□□□□□ -0.41
AF279873.3-204ENST00000523336 CLEC11AQ9Y240 323 aa12.5□□□□□ -0.41
AF279873.3-204ENST00000523336 SPDYE1Q8NFV5 336 aaPredicted RBP12.49□□□□□ -0.41
AF279873.3-204ENST00000523336 CEP170Q5SW79 1584 aa12.48□□□□□ -0.41
AF279873.3-204ENST00000523336 CLASP1Q7Z460 1538 aa12.48□□□□□ -0.41
AF279873.3-204ENST00000523336 NUP160Q12769 1436 aa12.48□□□□□ -0.41
AF279873.3-204ENST00000523336 FAM9AQ8IZU1 332 aaPredicted RBP12.47□□□□□ -0.41
AF279873.3-204ENST00000523336 RAPGEF2Q9Y4G8 1499 aa12.46□□□□□ -0.42
AF279873.3-204ENST00000523336 EEA1Q15075 1411 aa12.45□□□□□ -0.42
AF279873.3-204ENST00000523336 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
AF279873.3-204ENST00000523336 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
AF279873.3-204ENST00000523336 PRXQ9BXM0 1461 aa12.42□□□□□ -0.42
AF279873.3-204ENST00000523336 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
AF279873.3-204ENST00000523336 KIAA0586Q9BVV6 1533 aa12.39□□□□□ -0.43
AF279873.3-204ENST00000523336 HRCP23327 699 aa12.39□□□□□ -0.43
AF279873.3-204ENST00000523336 SHROOM2Q13796 1616 aa12.38□□□□□ -0.43
AF279873.3-204ENST00000523336 ERCC6L2Q5T890 1561 aa12.37□□□□□ -0.43
AF279873.3-204ENST00000523336 CTTNBP2Q8WZ74 1663 aa12.35□□□□□ -0.43
AF279873.3-204ENST00000523336 PRG4Q92954 1404 aaPredicted RBP12.34□□□□□ -0.43
AF279873.3-204ENST00000523336 KIF21BO75037 1637 aa12.33□□□□□ -0.43
AF279873.3-204ENST00000523336 IQGAP2Q13576 1575 aa12.33□□□□□ -0.44
AF279873.3-204ENST00000523336 UGGT2Q9NYU1 1516 aa12.27□□□□□ -0.44
AF279873.3-204ENST00000523336 UBTFP17480 764 aaKnown RBP12.26□□□□□ -0.45
AF279873.3-204ENST00000523336 CARMIL2Q6F5E8 1435 aa12.26□□□□□ -0.45
AF279873.3-204ENST00000523336 GOLGA3Q08378 1498 aa12.26□□□□□ -0.45
AF279873.3-204ENST00000523336 GABBR2O75899 941 aa12.25□□□□□ -0.45
AF279873.3-204ENST00000523336 DISP1Q96F81 1524 aa12.25□□□□□ -0.45
AF279873.3-204ENST00000523336 PRR29P0C7W0 189 aa12.24□□□□□ -0.45
AF279873.3-204ENST00000523336 TNIKQ9UKE5 1360 aa12.22□□□□□ -0.45
AF279873.3-204ENST00000523336 RANGAP1P46060 587 aaPredicted RBP12.22□□□□□ -0.45
AF279873.3-204ENST00000523336 PTPRGP23470 1445 aa12.21□□□□□ -0.45
AF279873.3-204ENST00000523336 KIF13AQ9H1H9 1805 aa12.21□□□□□ -0.45
AF279873.3-204ENST00000523336 TTBK1Q5TCY1 1321 aaPredicted RBP12.21□□□□□ -0.45
AF279873.3-204ENST00000523336 KIAA0556O60303 1618 aa12.21□□□□□ -0.46
AF279873.3-204ENST00000523336 P3H3Q8IVL6 736 aa12.19□□□□□ -0.46
AF279873.3-204ENST00000523336 FARP1Q9Y4F1 1045 aaPredicted RBP12.17□□□□□ -0.46
AF279873.3-204ENST00000523336 LOC105371045A0A1W2PR82 267 aa12.16□□□□□ -0.46
AF279873.3-204ENST00000523336 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
AF279873.3-204ENST00000523336 SAMD9Q5K651 1589 aa12.16□□□□□ -0.46
AF279873.3-204ENST00000523336 POTEIP0CG38 1075 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms