RNA–Protein interactions for RNA: ENST00000522381.1

CLINT1-205, Transcript of clathrin interactor 1, humanhuman

TSL 5

Gene CLINT1, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-205ENST00000522381 TOP2AP11388 1531 aaKnown RBP18.28■□□□□ 0.52
CLINT1-205ENST00000522381 RSF1Q96T23 1441 aaPredicted RBP18.24■□□□□ 0.51
CLINT1-205ENST00000522381 URB2Q14146 1524 aaKnown RBP18.15■□□□□ 0.5
CLINT1-205ENST00000522381 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
CLINT1-205ENST00000522381 ATXN8OSP0DMR3 200 aa18.1■□□□□ 0.49
CLINT1-205ENST00000522381 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
CLINT1-205ENST00000522381 IFT140Q96RY7 1462 aa17.99■□□□□ 0.47
CLINT1-205ENST00000522381 LHX8Q68G74 356 aa17.98■□□□□ 0.47
CLINT1-205ENST00000522381 ABCC8Q09428 1581 aa17.96■□□□□ 0.47
CLINT1-205ENST00000522381 TOPBP1Q92547 1522 aa17.95■□□□□ 0.46
CLINT1-205ENST00000522381 PRKAR2AP13861 404 aaKnown RBP17.95■□□□□ 0.46
CLINT1-205ENST00000522381 RIMBP3CA6NJZ7 1639 aa17.92■□□□□ 0.46
CLINT1-205ENST00000522381 RIMBP3BA6NNM3 1639 aa17.92■□□□□ 0.46
CLINT1-205ENST00000522381 RIMBP3Q9UFD9 1639 aa17.92■□□□□ 0.46
CLINT1-205ENST00000522381 DNMBPQ6XZF7 1577 aa17.91■□□□□ 0.46
CLINT1-205ENST00000522381 ZNF608Q9ULD9 1512 aaPredicted RBP17.91■□□□□ 0.46
CLINT1-205ENST00000522381 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
CLINT1-205ENST00000522381 C19orf67A6NJJ6 358 aa17.9■□□□□ 0.46
CLINT1-205ENST00000522381 GABBR2O75899 941 aa17.9■□□□□ 0.46
CLINT1-205ENST00000522381 TARBP1Q13395 1621 aaKnown RBP17.84■□□□□ 0.45
CLINT1-205ENST00000522381 CHD1O14646 1710 aa17.84■□□□□ 0.45
CLINT1-205ENST00000522381 ARHGEF11O15085 1522 aa17.82■□□□□ 0.44
CLINT1-205ENST00000522381 FBLN2P98095 1184 aa17.81■□□□□ 0.44
CLINT1-205ENST00000522381 CLEC11AQ9Y240 323 aa17.78■□□□□ 0.44
CLINT1-205ENST00000522381 SPDYE2BA6NHP3 402 aa17.75■□□□□ 0.43
CLINT1-205ENST00000522381 SPDYE6P0CI01 402 aa17.75■□□□□ 0.43
CLINT1-205ENST00000522381 SPDYE2Q495Y8 402 aa17.75■□□□□ 0.43
CLINT1-205ENST00000522381 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
CLINT1-205ENST00000522381 WDR97A6NE52 1622 aa17.74■□□□□ 0.43
CLINT1-205ENST00000522381 AQRO60306 1485 aaKnown RBP eCLIP17.72■□□□□ 0.433e-6■■■■■ 30.9
CLINT1-205ENST00000522381 SPDYE1Q8NFV5 336 aaPredicted RBP17.67■□□□□ 0.42
CLINT1-205ENST00000522381 PLSCR2Q9NRY7 297 aa17.67■□□□□ 0.42
CLINT1-205ENST00000522381 SOGA1O94964 1423 aa17.64■□□□□ 0.42
CLINT1-205ENST00000522381 RAD54L2Q9Y4B4 1467 aa17.63■□□□□ 0.41
CLINT1-205ENST00000522381 MKRN4PQ13434 485 aaPredicted RBP17.63■□□□□ 0.41
CLINT1-205ENST00000522381 CHADLQ6NUI6 762 aa17.62■□□□□ 0.41
CLINT1-205ENST00000522381 FGD5Q6ZNL6 1462 aa17.62■□□□□ 0.41
CLINT1-205ENST00000522381 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
CLINT1-205ENST00000522381 CYB5RLQ6IPT4 315 aa17.6■□□□□ 0.41
CLINT1-205ENST00000522381 POTEIP0CG38 1075 aa17.59■□□□□ 0.41
CLINT1-205ENST00000522381 CUX1P39880 1505 aa17.58■□□□□ 0.41
CLINT1-205ENST00000522381 SNAPC4Q5SXM2 1469 aa17.58■□□□□ 0.41
CLINT1-205ENST00000522381 MAGI1Q96QZ7 1491 aaPredicted RBP17.58■□□□□ 0.41
CLINT1-205ENST00000522381 TDRD9Q8NDG6 1382 aaKnown RBP17.58■□□□□ 0.4
CLINT1-205ENST00000522381 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
CLINT1-205ENST00000522381 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
CLINT1-205ENST00000522381 PBRM1Q86U86 1689 aa17.57■□□□□ 0.4
CLINT1-205ENST00000522381 GRIN2BQ13224 1484 aa17.54■□□□□ 0.4
CLINT1-205ENST00000522381 SYNJ2O15056 1496 aa17.5■□□□□ 0.39
CLINT1-205ENST00000522381 ZNF692Q9BU19 519 aaPredicted RBP17.5■□□□□ 0.39
CLINT1-205ENST00000522381 CHMP7Q8WUX9 453 aaPredicted RBP17.49■□□□□ 0.39
CLINT1-205ENST00000522381 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
CLINT1-205ENST00000522381 SSUH2Q9Y2M2 353 aa17.47■□□□□ 0.39
CLINT1-205ENST00000522381 ABCA5Q8WWZ7 1642 aa17.47■□□□□ 0.39
CLINT1-205ENST00000522381 GAPVD1Q14C86 1478 aa17.45■□□□□ 0.38
CLINT1-205ENST00000522381 ABCA10Q8WWZ4 1543 aa17.43■□□□□ 0.38
CLINT1-205ENST00000522381 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
CLINT1-205ENST00000522381 TOP2BQ02880 1626 aa17.33■□□□□ 0.37
CLINT1-205ENST00000522381 ADAMTS12P58397 1594 aa17.32■□□□□ 0.36
CLINT1-205ENST00000522381 WRNQ14191 1432 aaPredicted RBP eCLIP17.32■□□□□ 0.36
CLINT1-205ENST00000522381 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
CLINT1-205ENST00000522381 CD44P16070 742 aaKnown RBP17.31■□□□□ 0.36
CLINT1-205ENST00000522381 PRR29P0C7W0 189 aa17.29■□□□□ 0.36
CLINT1-205ENST00000522381 EHMT2Q96KQ7 1210 aa17.27■□□□□ 0.36
CLINT1-205ENST00000522381 SHROOM2Q13796 1616 aa17.27■□□□□ 0.36
CLINT1-205ENST00000522381 CEP170Q5SW79 1584 aa17.27■□□□□ 0.35
CLINT1-205ENST00000522381 SUPT5HO00267 1087 aaKnown RBP17.26■□□□□ 0.35
CLINT1-205ENST00000522381 NUP160Q12769 1436 aa17.25■□□□□ 0.35
CLINT1-205ENST00000522381 ERICH3Q5RHP9 1530 aa17.25■□□□□ 0.35
CLINT1-205ENST00000522381 FHAD1B1AJZ9 1412 aa17.23■□□□□ 0.35
CLINT1-205ENST00000522381 ERCC6L2Q5T890 1561 aa17.23■□□□□ 0.35
CLINT1-205ENST00000522381 FARP1Q9Y4F1 1045 aaPredicted RBP17.17■□□□□ 0.34
CLINT1-205ENST00000522381 DCBLD2Q96PD2 775 aa17.14■□□□□ 0.33
CLINT1-205ENST00000522381 KIF13AQ9H1H9 1805 aa17.14■□□□□ 0.33
CLINT1-205ENST00000522381 OTUD5Q96G74 571 aa17.09■□□□□ 0.33
CLINT1-205ENST00000522381 RUSC2Q8N2Y8 1516 aa17.09■□□□□ 0.33
CLINT1-205ENST00000522381 PRG4Q92954 1404 aaPredicted RBP17.06■□□□□ 0.32
CLINT1-205ENST00000522381 CLCN6P51797 869 aa17.06■□□□□ 0.32
CLINT1-205ENST00000522381 CUL7Q14999 1698 aa17.02■□□□□ 0.32
CLINT1-205ENST00000522381 JPH4Q96JJ6 628 aa17.02■□□□□ 0.32
CLINT1-205ENST00000522381 POTEB2H3BUK9 544 aa17.01■□□□□ 0.31
CLINT1-205ENST00000522381 POTEMA6NI47 508 aa17■□□□□ 0.31
CLINT1-205ENST00000522381 MAPKBP1O60336 1514 aa16.98■□□□□ 0.31
CLINT1-205ENST00000522381 ZNF579Q8NAF0 562 aaKnown RBP16.97■□□□□ 0.31
CLINT1-205ENST00000522381 ADCY10Q96PN6 1610 aa16.96■□□□□ 0.3
CLINT1-205ENST00000522381 KIAA0586Q9BVV6 1533 aa16.95■□□□□ 0.3
CLINT1-205ENST00000522381 KIF27Q86VH2 1401 aa16.94■□□□□ 0.3
CLINT1-205ENST00000522381 ABCC10Q5T3U5 1492 aa16.93■□□□□ 0.3
CLINT1-205ENST00000522381 DIP2BQ9P265 1576 aa16.93■□□□□ 0.3
CLINT1-205ENST00000522381 GALR2O43603 387 aaPredicted RBP16.92■□□□□ 0.3
CLINT1-205ENST00000522381 NPM1P06748 294 aaKnown RBP eCLIP16.92■□□□□ 0.3
CLINT1-205ENST00000522381 POTEGQ6S5H5 508 aa16.92■□□□□ 0.3
CLINT1-205ENST00000522381 ZRANB1Q9UGI0 708 aa16.92■□□□□ 0.3
CLINT1-205ENST00000522381 IGF1RP08069 1367 aa16.89■□□□□ 0.3
CLINT1-205ENST00000522381 TSPOAP1O95153 1857 aa16.86■□□□□ 0.29
CLINT1-205ENST00000522381 FAM69CQ0P6D2 419 aa16.86■□□□□ 0.29
CLINT1-205ENST00000522381 KDM6BO15054 1643 aa16.83■□□□□ 0.28
CLINT1-205ENST00000522381 IQGAP2Q13576 1575 aa16.81■□□□□ 0.28
CLINT1-205ENST00000522381 SPDYE4A6NLX3 237 aa16.8■□□□□ 0.28
CLINT1-205ENST00000522381 CARMIL1Q5VZK9 1371 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms