RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 GOLGA3Q08378 1498 aa15.49■□□□□ 0.07
SHPRH-209ENST00000521977 ERICH3Q5RHP9 1530 aa15.48■□□□□ 0.07
SHPRH-209ENST00000521977 TDRD9Q8NDG6 1382 aaKnown RBP15.47■□□□□ 0.07
SHPRH-209ENST00000521977 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.07
SHPRH-209ENST00000521977 RAPGEF2Q9Y4G8 1499 aa15.45■□□□□ 0.06
SHPRH-209ENST00000521977 U3KPZ7 1027 aaPredicted RBP15.43■□□□□ 0.06
SHPRH-209ENST00000521977 TNIKQ9UKE5 1360 aa15.43■□□□□ 0.06
SHPRH-209ENST00000521977 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
SHPRH-209ENST00000521977 CUL7Q14999 1698 aa15.42■□□□□ 0.06
SHPRH-209ENST00000521977 CARMIL1Q5VZK9 1371 aa15.42■□□□□ 0.06
SHPRH-209ENST00000521977 AQRO60306 1485 aaKnown RBP eCLIP15.4■□□□□ 0.067e-7■■□□□ 14.1
SHPRH-209ENST00000521977 PBRM1Q86U86 1689 aa15.4■□□□□ 0.06
SHPRH-209ENST00000521977 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
SHPRH-209ENST00000521977 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
SHPRH-209ENST00000521977 EIF4G3O43432 1585 aaKnown RBP15.38■□□□□ 0.05
SHPRH-209ENST00000521977 UBTFP17480 764 aaKnown RBP15.34■□□□□ 0.05
SHPRH-209ENST00000521977 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
SHPRH-209ENST00000521977 ADAMTS12P58397 1594 aa15.32■□□□□ 0.04
SHPRH-209ENST00000521977 FHAD1B1AJZ9 1412 aa15.32■□□□□ 0.04
SHPRH-209ENST00000521977 CEP162Q5TB80 1403 aa15.3■□□□□ 0.04
SHPRH-209ENST00000521977 SNAPC4Q5SXM2 1469 aa15.28■□□□□ 0.04
SHPRH-209ENST00000521977 MAGI1Q96QZ7 1491 aaPredicted RBP15.28■□□□□ 0.04
SHPRH-209ENST00000521977 SYNJ2O15056 1496 aa15.21■□□□□ 0.03
SHPRH-209ENST00000521977 CLIP1P30622 1438 aa15.21■□□□□ 0.03
SHPRH-209ENST00000521977 CTTNBP2Q8WZ74 1663 aa15.21■□□□□ 0.03
SHPRH-209ENST00000521977 GRIN2AQ12879 1464 aa15.19■□□□□ 0.02
SHPRH-209ENST00000521977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.14■□□□□ 0.01
SHPRH-209ENST00000521977 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
SHPRH-209ENST00000521977 ARHGAP35Q9NRY4 1499 aa15.14■□□□□ 0.01
SHPRH-209ENST00000521977 APLP2Q06481 763 aa15.13■□□□□ 0.01
SHPRH-209ENST00000521977 CHMP7Q8WUX9 453 aaPredicted RBP15.13■□□□□ 0.01
SHPRH-209ENST00000521977 NUP160Q12769 1436 aa15.12■□□□□ 0.01
SHPRH-209ENST00000521977 SPINK5Q9NQ38 1064 aaPredicted RBP15.12■□□□□ 0.01
SHPRH-209ENST00000521977 ARAP1Q96P48 1450 aa15.12■□□□□ 0.01
SHPRH-209ENST00000521977 CAPN15O75808 1086 aa15.11■□□□□ 0.01
SHPRH-209ENST00000521977 KIAA0586Q9BVV6 1533 aa15.11■□□□□ 0.01
SHPRH-209ENST00000521977 EFCAB5A4FU69 1503 aa15.1■□□□□ 0.01
SHPRH-209ENST00000521977 IQGAP2Q13576 1575 aa15.1■□□□□ 0.01
SHPRH-209ENST00000521977 CEP170Q5SW79 1584 aa15.1■□□□□ 0.01
SHPRH-209ENST00000521977 VPS8Q8N3P4 1428 aa15.09■□□□□ 0.01
SHPRH-209ENST00000521977 SAMD9Q5K651 1589 aa15.07■□□□□ 0
SHPRH-209ENST00000521977 RANGAP1P46060 587 aaPredicted RBP15.07■□□□□ 0
SHPRH-209ENST00000521977 CHD1O14646 1710 aa15.06■□□□□ 0
SHPRH-209ENST00000521977 UGGT2Q9NYU1 1516 aa15.06■□□□□ 0
SHPRH-209ENST00000521977 DSG3P32926 999 aa15.05■□□□□ -0
SHPRH-209ENST00000521977 FBLN2P98095 1184 aa15.05■□□□□ -0
SHPRH-209ENST00000521977 SAMD1Q6SPF0 538 aaPredicted RBP15.03■□□□□ -0
SHPRH-209ENST00000521977 FHOD3Q2V2M9 1422 aa14.99□□□□□ -0.01
SHPRH-209ENST00000521977 SLC4A1APQ9BWU0 796 aaKnown RBP14.98□□□□□ -0.01
SHPRH-209ENST00000521977 DISP1Q96F81 1524 aa14.97□□□□□ -0.01
SHPRH-209ENST00000521977 ZNF219Q9P2Y4 722 aaPredicted RBP14.97□□□□□ -0.01
SHPRH-209ENST00000521977 KIAA0556O60303 1618 aa14.96□□□□□ -0.01
SHPRH-209ENST00000521977 P3H3Q8IVL6 736 aa14.95□□□□□ -0.02
SHPRH-209ENST00000521977 JPH4Q96JJ6 628 aa14.95□□□□□ -0.02
SHPRH-209ENST00000521977 FMN1Q68DA7 1419 aa14.94□□□□□ -0.02
SHPRH-209ENST00000521977 CLASP1Q7Z460 1538 aa14.94□□□□□ -0.02
SHPRH-209ENST00000521977 SHROOM2Q13796 1616 aa14.93□□□□□ -0.02
SHPRH-209ENST00000521977 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
SHPRH-209ENST00000521977 CASKIN1Q8WXD9 1431 aa14.91□□□□□ -0.02
SHPRH-209ENST00000521977 PCF11O94913 1555 aaKnown RBP14.9□□□□□ -0.02
SHPRH-209ENST00000521977 FYCO1Q9BQS8 1478 aa14.9□□□□□ -0.02
SHPRH-209ENST00000521977 CARMIL2Q6F5E8 1435 aa14.9□□□□□ -0.02
SHPRH-209ENST00000521977 MAP3K1Q13233 1512 aa14.89□□□□□ -0.03
SHPRH-209ENST00000521977 TRHP20396 242 aaPredicted RBP14.88□□□□□ -0.03
SHPRH-209ENST00000521977 PRG4Q92954 1404 aaPredicted RBP14.86□□□□□ -0.03
SHPRH-209ENST00000521977 TIAM1Q13009 1591 aa14.83□□□□□ -0.04
SHPRH-209ENST00000521977 CFAP43Q8NDM7 1665 aa14.82□□□□□ -0.04
SHPRH-209ENST00000521977 HECW1Q76N89 1606 aa14.81□□□□□ -0.04
SHPRH-209ENST00000521977 PPARGC1BQ86YN6 1023 aaKnown RBP14.8□□□□□ -0.04
SHPRH-209ENST00000521977 OSCARQ8IYS5 282 aa14.8□□□□□ -0.04
SHPRH-209ENST00000521977 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
SHPRH-209ENST00000521977 LRRIQ1Q96JM4 1722 aa14.8□□□□□ -0.04
SHPRH-209ENST00000521977 ERCC6L2Q5T890 1561 aa14.79□□□□□ -0.04
SHPRH-209ENST00000521977 RAPGEF6Q8TEU7 1601 aa14.79□□□□□ -0.04
SHPRH-209ENST00000521977 KANK4Q5T7N3 995 aaPredicted RBP14.78□□□□□ -0.04
SHPRH-209ENST00000521977 CCDC18Q5T9S5 1454 aa14.77□□□□□ -0.04
SHPRH-209ENST00000521977 TRIM26Q12899 539 aaPredicted RBP14.77□□□□□ -0.05
SHPRH-209ENST00000521977 ABCA8O94911 1581 aa14.77□□□□□ -0.05
SHPRH-209ENST00000521977 LRRC9Q6ZRR7 1453 aa14.76□□□□□ -0.05
SHPRH-209ENST00000521977 PTPRGP23470 1445 aa14.75□□□□□ -0.05
SHPRH-209ENST00000521977 EPRSP07814 1512 aaKnown RBP14.75□□□□□ -0.05
SHPRH-209ENST00000521977 NUP153P49790 1475 aaKnown RBP14.75□□□□□ -0.05
SHPRH-209ENST00000521977 PLB1Q6P1J6 1458 aa14.75□□□□□ -0.05
SHPRH-209ENST00000521977 ATP1B4Q9UN42 357 aaPredicted RBP14.73□□□□□ -0.05
SHPRH-209ENST00000521977 ABCB7O75027 752 aa14.72□□□□□ -0.05
SHPRH-209ENST00000521977 CDK13Q14004 1512 aaKnown RBP14.7□□□□□ -0.06
SHPRH-209ENST00000521977 TTBK1Q5TCY1 1321 aaPredicted RBP14.69□□□□□ -0.06
SHPRH-209ENST00000521977 UACAQ9BZF9 1416 aa14.68□□□□□ -0.06
SHPRH-209ENST00000521977 MAGI3Q5TCQ9 1506 aa14.68□□□□□ -0.06
SHPRH-209ENST00000521977 EHBP1L1Q8N3D4 1523 aa14.68□□□□□ -0.06
SHPRH-209ENST00000521977 PCGF6Q9BYE7 350 aa14.67□□□□□ -0.06
SHPRH-209ENST00000521977 UHRF1BP1LA0JNW5 1464 aa14.66□□□□□ -0.06
SHPRH-209ENST00000521977 ABCC2Q92887 1545 aa14.66□□□□□ -0.06
SHPRH-209ENST00000521977 ATP10BO94823 1461 aa14.65□□□□□ -0.06
SHPRH-209ENST00000521977 MTUS2Q5JR59 1369 aa14.65□□□□□ -0.06
SHPRH-209ENST00000521977 ARHGEF11O15085 1522 aa14.63□□□□□ -0.07
SHPRH-209ENST00000521977 SUPT6HQ7KZ85 1726 aaKnown RBP14.62□□□□□ -0.07
SHPRH-209ENST00000521977 RRBP1Q9P2E9 1410 aaKnown RBP14.62□□□□□ -0.07
SHPRH-209ENST00000521977 PHLDB1Q86UU1 1377 aa14.61□□□□□ -0.07
SHPRH-209ENST00000521977 CDK11AQ9UQ88 783 aaPredicted RBP14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms