RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 FOXD4L1Q9NU39 408 aa20.58■□□□□ 0.89
CSMD1-210ENST00000521646 FGD5Q6ZNL6 1462 aa20.56■□□□□ 0.88
CSMD1-210ENST00000521646 CYB5RLQ6IPT4 315 aa20.56■□□□□ 0.88
CSMD1-210ENST00000521646 SOGA1O94964 1423 aa20.55■□□□□ 0.88
CSMD1-210ENST00000521646 MYCNP04198 464 aaPredicted RBP20.53■□□□□ 0.88
CSMD1-210ENST00000521646 SNAPC4Q5SXM2 1469 aa20.53■□□□□ 0.88
CSMD1-210ENST00000521646 FBLN2P98095 1184 aa20.52■□□□□ 0.88
CSMD1-210ENST00000521646 APLP2Q06481 763 aa20.52■□□□□ 0.88
CSMD1-210ENST00000521646 SAMD1Q6SPF0 538 aaPredicted RBP20.51■□□□□ 0.87
CSMD1-210ENST00000521646 CLASP1Q7Z460 1538 aa20.49■□□□□ 0.87
CSMD1-210ENST00000521646 WDR97A6NE52 1622 aa20.48■□□□□ 0.87
CSMD1-210ENST00000521646 MAGI1Q96QZ7 1491 aaPredicted RBP20.38■□□□□ 0.85
CSMD1-210ENST00000521646 TRHP20396 242 aaPredicted RBP20.38■□□□□ 0.85
CSMD1-210ENST00000521646 GRIN2BQ13224 1484 aa20.37■□□□□ 0.85
CSMD1-210ENST00000521646 ZBTB22O15209 634 aa20.37■□□□□ 0.85
CSMD1-210ENST00000521646 PBRM1Q86U86 1689 aa20.35■□□□□ 0.85
CSMD1-210ENST00000521646 SYNJ2O15056 1496 aa20.34■□□□□ 0.85
CSMD1-210ENST00000521646 ABCA5Q8WWZ7 1642 aa20.34■□□□□ 0.85
CSMD1-210ENST00000521646 SYNJ1O43426 1573 aa20.33■□□□□ 0.84
CSMD1-210ENST00000521646 CHMP7Q8WUX9 453 aaPredicted RBP20.31■□□□□ 0.84
CSMD1-210ENST00000521646 GAPVD1Q14C86 1478 aa20.3■□□□□ 0.84
CSMD1-210ENST00000521646 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
CSMD1-210ENST00000521646 ZNF219Q9P2Y4 722 aaPredicted RBP20.29■□□□□ 0.84
CSMD1-210ENST00000521646 ERCC6L2Q5T890 1561 aa20.28■□□□□ 0.84
CSMD1-210ENST00000521646 DSG3P32926 999 aa20.27■□□□□ 0.84
CSMD1-210ENST00000521646 SUPT5HO00267 1087 aaKnown RBP20.23■□□□□ 0.83
CSMD1-210ENST00000521646 CEP170Q5SW79 1584 aa20.18■□□□□ 0.82
CSMD1-210ENST00000521646 ADAMTS12P58397 1594 aa20.17■□□□□ 0.82
CSMD1-210ENST00000521646 GRIN2AQ12879 1464 aa20.16■□□□□ 0.82
CSMD1-210ENST00000521646 BIVM-ERCC5R4GMW8 1640 aa20.16■□□□□ 0.82
CSMD1-210ENST00000521646 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
CSMD1-210ENST00000521646 ABCB7O75027 752 aa20.13■□□□□ 0.81
CSMD1-210ENST00000521646 NUP160Q12769 1436 aa20.12■□□□□ 0.81
CSMD1-210ENST00000521646 WRNQ14191 1432 aaPredicted RBP eCLIP20.1■□□□□ 0.81
CSMD1-210ENST00000521646 SHROOM2Q13796 1616 aa20.08■□□□□ 0.8
CSMD1-210ENST00000521646 FHAD1B1AJZ9 1412 aa20.02■□□□□ 0.8
CSMD1-210ENST00000521646 ATF5Q9Y2D1 282 aaPredicted RBP20.02■□□□□ 0.8
CSMD1-210ENST00000521646 ERICH3Q5RHP9 1530 aa19.99■□□□□ 0.79
CSMD1-210ENST00000521646 EHMT2Q96KQ7 1210 aa19.97■□□□□ 0.79
CSMD1-210ENST00000521646 POLA2Q14181 598 aa19.92■□□□□ 0.78
CSMD1-210ENST00000521646 CSRNP3Q8WYN3 585 aa19.91■□□□□ 0.78
CSMD1-210ENST00000521646 RUSC2Q8N2Y8 1516 aa19.91■□□□□ 0.78
CSMD1-210ENST00000521646 KIF13AQ9H1H9 1805 aa19.9■□□□□ 0.78
CSMD1-210ENST00000521646 PRG4Q92954 1404 aaPredicted RBP19.9■□□□□ 0.78
CSMD1-210ENST00000521646 ATXN8OSP0DMR3 200 aa19.88■□□□□ 0.77
CSMD1-210ENST00000521646 JPH4Q96JJ6 628 aa19.84■□□□□ 0.77
CSMD1-210ENST00000521646 ADCY10Q96PN6 1610 aa19.78■□□□□ 0.76
CSMD1-210ENST00000521646 IGF1RP08069 1367 aa19.78■□□□□ 0.76
CSMD1-210ENST00000521646 ABCC10Q5T3U5 1492 aa19.71■□□□□ 0.75
CSMD1-210ENST00000521646 DIP2BQ9P265 1576 aa19.7■□□□□ 0.74
CSMD1-210ENST00000521646 KIAA0586Q9BVV6 1533 aa19.7■□□□□ 0.74
CSMD1-210ENST00000521646 MAPKBP1O60336 1514 aa19.69■□□□□ 0.74
CSMD1-210ENST00000521646 CUL7Q14999 1698 aa19.65■□□□□ 0.74
CSMD1-210ENST00000521646 FAM69CQ0P6D2 419 aa19.65■□□□□ 0.74
CSMD1-210ENST00000521646 KIF27Q86VH2 1401 aa19.64■□□□□ 0.73
CSMD1-210ENST00000521646 CARMIL1Q5VZK9 1371 aa19.57■□□□□ 0.72
CSMD1-210ENST00000521646 TSPOAP1O95153 1857 aa19.55■□□□□ 0.72
CSMD1-210ENST00000521646 TTBK1Q5TCY1 1321 aaPredicted RBP19.51■□□□□ 0.71
CSMD1-210ENST00000521646 PTPRGP23470 1445 aa19.51■□□□□ 0.71
CSMD1-210ENST00000521646 DISP1Q96F81 1524 aa19.51■□□□□ 0.71
CSMD1-210ENST00000521646 PPRC1Q5VV67 1664 aaKnown RBP19.51■□□□□ 0.71
CSMD1-210ENST00000521646 NPM1P06748 294 aaKnown RBP eCLIP19.5■□□□□ 0.71
CSMD1-210ENST00000521646 ZBTB12Q9Y330 459 aaPredicted RBP19.5■□□□□ 0.71
CSMD1-210ENST00000521646 KDM6BO15054 1643 aa19.5■□□□□ 0.71
CSMD1-210ENST00000521646 IQGAP2Q13576 1575 aa19.49■□□□□ 0.71
CSMD1-210ENST00000521646 ABCC2Q92887 1545 aa19.48■□□□□ 0.71
CSMD1-210ENST00000521646 KDM4FA0A1W2PPD8 638 aa19.48■□□□□ 0.71
CSMD1-210ENST00000521646 TNIKQ9UKE5 1360 aa19.46■□□□□ 0.71
CSMD1-210ENST00000521646 ASXL2Q76L83 1435 aa19.44■□□□□ 0.7
CSMD1-210ENST00000521646 UHRF1BP1LA0JNW5 1464 aa19.41■□□□□ 0.7
CSMD1-210ENST00000521646 COL17A1Q9UMD9 1497 aaPredicted RBP19.41■□□□□ 0.7
CSMD1-210ENST00000521646 CARMIL2Q6F5E8 1435 aa19.39■□□□□ 0.69
CSMD1-210ENST00000521646 UACAQ9BZF9 1416 aa19.39■□□□□ 0.69
CSMD1-210ENST00000521646 UGGT2Q9NYU1 1516 aa19.39■□□□□ 0.69
CSMD1-210ENST00000521646 GLI2P10070 1586 aa19.39■□□□□ 0.69
CSMD1-210ENST00000521646 KIAA0556O60303 1618 aa19.37■□□□□ 0.69
CSMD1-210ENST00000521646 RAPGEF2Q9Y4G8 1499 aa19.37■□□□□ 0.69
CSMD1-210ENST00000521646 KDM5BQ9UGL1 1544 aa19.36■□□□□ 0.69
CSMD1-210ENST00000521646 RBM42Q9BTD8 480 aaKnown RBP19.36■□□□□ 0.69
CSMD1-210ENST00000521646 ZCCHC11Q5TAX3 1644 aaKnown RBP19.35■□□□□ 0.69
CSMD1-210ENST00000521646 PLB1Q6P1J6 1458 aa19.35■□□□□ 0.69
CSMD1-210ENST00000521646 EPRSP07814 1512 aaKnown RBP19.34■□□□□ 0.69
CSMD1-210ENST00000521646 MAP3K4Q9Y6R4 1608 aa19.33■□□□□ 0.69
CSMD1-210ENST00000521646 CTTNBP2Q8WZ74 1663 aa19.25■□□□□ 0.67
CSMD1-210ENST00000521646 ADGRL1O94910 1474 aa19.23■□□□□ 0.67
CSMD1-210ENST00000521646 ABCA8O94911 1581 aa19.23■□□□□ 0.67
CSMD1-210ENST00000521646 PRXQ9BXM0 1461 aa19.21■□□□□ 0.67
CSMD1-210ENST00000521646 WDR7Q9Y4E6 1490 aa19.2■□□□□ 0.66
CSMD1-210ENST00000521646 TEX14Q8IWB6 1497 aa19.12■□□□□ 0.65
CSMD1-210ENST00000521646 MAGI3Q5TCQ9 1506 aa19.1■□□□□ 0.65
CSMD1-210ENST00000521646 MKRN4PQ13434 485 aaPredicted RBP19.09■□□□□ 0.65
CSMD1-210ENST00000521646 CFAP43Q8NDM7 1665 aa19.08■□□□□ 0.65
CSMD1-210ENST00000521646 ARID3CA6NKF2 412 aa19.08■□□□□ 0.64
CSMD1-210ENST00000521646 GOLGA3Q08378 1498 aa19.08■□□□□ 0.64
CSMD1-210ENST00000521646 CD109Q6YHK3 1445 aa19.08■□□□□ 0.64
CSMD1-210ENST00000521646 KCNH8Q96L42 1107 aa19.07■□□□□ 0.64
CSMD1-210ENST00000521646 ATP10BO94823 1461 aa19.05■□□□□ 0.64
CSMD1-210ENST00000521646 P3H3Q8IVL6 736 aa19.05■□□□□ 0.64
CSMD1-210ENST00000521646 HECW2Q9P2P5 1572 aa19.04■□□□□ 0.64
CSMD1-210ENST00000521646 SAMD9Q5K651 1589 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms