RNA–Protein interactions for RNA: ENST00000521187.1

LAMA4-214, Transcript of laminin subunit alpha 4, humanhuman

TSL 2

Gene LAMA4, Length 2,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-214ENST00000521187 TOPBP1Q92547 1522 aa10.48□□□□□ -0.73
LAMA4-214ENST00000521187 KANK4Q5T7N3 995 aaPredicted RBP10.48□□□□□ -0.73
LAMA4-214ENST00000521187 CENPBP07199 599 aaPredicted RBP10.48□□□□□ -0.73
LAMA4-214ENST00000521187 POLA1P09884 1462 aaPredicted RBP10.48□□□□□ -0.73
LAMA4-214ENST00000521187 URB2Q14146 1524 aaKnown RBP10.47□□□□□ -0.73
LAMA4-214ENST00000521187 ITGAEP38570 1179 aa10.47□□□□□ -0.73
LAMA4-214ENST00000521187 MSH5O43196 834 aa10.45□□□□□ -0.74
LAMA4-214ENST00000521187 VPS8Q8N3P4 1428 aa10.44□□□□□ -0.74
LAMA4-214ENST00000521187 PDS5BQ9NTI5 1447 aa10.44□□□□□ -0.74
LAMA4-214ENST00000521187 PRDM2Q13029 1718 aa10.43□□□□□ -0.74
LAMA4-214ENST00000521187 ARAP1Q96P48 1450 aa10.43□□□□□ -0.74
LAMA4-214ENST00000521187 ARID3CA6NKF2 412 aa10.42□□□□□ -0.74
LAMA4-214ENST00000521187 ACIN1Q9UKV3 1341 aaKnown RBP10.42□□□□□ -0.74
LAMA4-214ENST00000521187 DNMBPQ6XZF7 1577 aa10.41□□□□□ -0.74
LAMA4-214ENST00000521187 KIF21AQ7Z4S6 1674 aa10.41□□□□□ -0.74
LAMA4-214ENST00000521187 LAMC3Q9Y6N6 1575 aa10.4□□□□□ -0.75
LAMA4-214ENST00000521187 RTN4Q9NQC3 1192 aaKnown RBP10.4□□□□□ -0.75
LAMA4-214ENST00000521187 AQRO60306 1485 aaKnown RBP eCLIP10.39□□□□□ -0.75
LAMA4-214ENST00000521187 FBLN2P98095 1184 aa10.38□□□□□ -0.75
LAMA4-214ENST00000521187 ARHGAP35Q9NRY4 1499 aa10.38□□□□□ -0.75
LAMA4-214ENST00000521187 ERICH3Q5RHP9 1530 aa10.38□□□□□ -0.75
LAMA4-214ENST00000521187 FHOD3Q2V2M9 1422 aa10.35□□□□□ -0.75
LAMA4-214ENST00000521187 ABCA10Q8WWZ4 1543 aa10.35□□□□□ -0.75
LAMA4-214ENST00000521187 ERCC6Q03468 1493 aa10.35□□□□□ -0.75
LAMA4-214ENST00000521187 GAPVD1Q14C86 1478 aa10.34□□□□□ -0.75
LAMA4-214ENST00000521187 GTF3C3Q9Y5Q9 886 aa10.33□□□□□ -0.76
LAMA4-214ENST00000521187 ZEB1P37275 1124 aaPredicted RBP10.32□□□□□ -0.76
LAMA4-214ENST00000521187 ZNF608Q9ULD9 1512 aaPredicted RBP10.32□□□□□ -0.76
LAMA4-214ENST00000521187 NEUROD1Q13562 356 aa10.31□□□□□ -0.76
LAMA4-214ENST00000521187 FAM50AQ14320 339 aaKnown RBP10.3□□□□□ -0.76
LAMA4-214ENST00000521187 CNKSR2Q8WXI2 1034 aa10.3□□□□□ -0.76
LAMA4-214ENST00000521187 MRC2Q9UBG0 1479 aa10.28□□□□□ -0.76
LAMA4-214ENST00000521187 AMER1Q5JTC6 1135 aaPredicted RBP10.26□□□□□ -0.77
LAMA4-214ENST00000521187 ANP32EQ9BTT0 268 aa10.25□□□□□ -0.77
LAMA4-214ENST00000521187 FOXD4L1Q9NU39 408 aa10.23□□□□□ -0.77
LAMA4-214ENST00000521187 CHMP7Q8WUX9 453 aaPredicted RBP10.23□□□□□ -0.77
LAMA4-214ENST00000521187 TARBP1Q13395 1621 aaKnown RBP10.22□□□□□ -0.77
LAMA4-214ENST00000521187 ABCA5Q8WWZ7 1642 aa10.21□□□□□ -0.77
LAMA4-214ENST00000521187 WDR97A6NE52 1622 aa10.2□□□□□ -0.78
LAMA4-214ENST00000521187 PHLDB1Q86UU1 1377 aa10.2□□□□□ -0.78
LAMA4-214ENST00000521187 PCF11O94913 1555 aaKnown RBP10.2□□□□□ -0.78
LAMA4-214ENST00000521187 CCNB3Q8WWL7 1395 aa10.18□□□□□ -0.78
LAMA4-214ENST00000521187 CUL7Q14999 1698 aa10.18□□□□□ -0.78
LAMA4-214ENST00000521187 SNAPC4Q5SXM2 1469 aa10.18□□□□□ -0.78
LAMA4-214ENST00000521187 FHAD1B1AJZ9 1412 aa10.17□□□□□ -0.78
LAMA4-214ENST00000521187 GRIN2BQ13224 1484 aa10.17□□□□□ -0.78
LAMA4-214ENST00000521187 MTUS2Q5JR59 1369 aa10.17□□□□□ -0.78
LAMA4-214ENST00000521187 LRRC9Q6ZRR7 1453 aa10.16□□□□□ -0.78
LAMA4-214ENST00000521187 IFT140Q96RY7 1462 aa10.15□□□□□ -0.78
LAMA4-214ENST00000521187 TIAM1Q13009 1591 aa10.15□□□□□ -0.78
LAMA4-214ENST00000521187 CHIC2Q9UKJ5 165 aa10.14□□□□□ -0.79
LAMA4-214ENST00000521187 CTTNBP2Q8WZ74 1663 aa10.14□□□□□ -0.79
LAMA4-214ENST00000521187 PBRM1Q86U86 1689 aa10.14□□□□□ -0.79
LAMA4-214ENST00000521187 WDR62O43379 1518 aa10.14□□□□□ -0.79
LAMA4-214ENST00000521187 DAXXQ9UER7 740 aaPredicted RBP10.12□□□□□ -0.79
LAMA4-214ENST00000521187 FMN1Q68DA7 1419 aa10.11□□□□□ -0.79
LAMA4-214ENST00000521187 EIF4G3O43432 1585 aaKnown RBP10.11□□□□□ -0.79
LAMA4-214ENST00000521187 CASKIN1Q8WXD9 1431 aa10.11□□□□□ -0.79
LAMA4-214ENST00000521187 ADAMTS12P58397 1594 aa10.1□□□□□ -0.79
LAMA4-214ENST00000521187 RRBP1Q9P2E9 1410 aaKnown RBP10.1□□□□□ -0.79
LAMA4-214ENST00000521187 JPH4Q96JJ6 628 aa10.09□□□□□ -0.79
LAMA4-214ENST00000521187 RRP7BPQ9NSQ0 103 aa10.09□□□□□ -0.79
LAMA4-214ENST00000521187 DHX57Q6P158 1386 aaKnown RBP10.09□□□□□ -0.79
LAMA4-214ENST00000521187 RAB3GAP2Q9H2M9 1393 aa10.09□□□□□ -0.79
LAMA4-214ENST00000521187 THOC2Q8NI27 1593 aaKnown RBP10.09□□□□□ -0.79
LAMA4-214ENST00000521187 CDK13Q14004 1512 aaKnown RBP10.08□□□□□ -0.8
LAMA4-214ENST00000521187 SIN3AQ96ST3 1273 aa10.08□□□□□ -0.8
LAMA4-214ENST00000521187 EFCAB5A4FU69 1503 aa10.08□□□□□ -0.8
LAMA4-214ENST00000521187 IQGAP2Q13576 1575 aa10.08□□□□□ -0.8
LAMA4-214ENST00000521187 FYCO1Q9BQS8 1478 aa10.08□□□□□ -0.8
LAMA4-214ENST00000521187 DIEXFQ68CQ4 756 aaKnown RBP10.07□□□□□ -0.8
LAMA4-214ENST00000521187 GRIN2AQ12879 1464 aa10.07□□□□□ -0.8
LAMA4-214ENST00000521187 ZNF777Q9ULD5 760 aaPredicted RBP10.07□□□□□ -0.8
LAMA4-214ENST00000521187 ZNF644Q9H582 1327 aaPredicted RBP10.05□□□□□ -0.8
LAMA4-214ENST00000521187 SAMD9Q5K651 1589 aa10.04□□□□□ -0.8
LAMA4-214ENST00000521187 EIF5BO60841 1220 aaKnown RBP10.04□□□□□ -0.8
LAMA4-214ENST00000521187 MAGI3Q5TCQ9 1506 aa10.03□□□□□ -0.8
LAMA4-214ENST00000521187 LRRIQ1Q96JM4 1722 aa10.03□□□□□ -0.8
LAMA4-214ENST00000521187 ZNF316A6NFI3 1004 aaPredicted RBP10.03□□□□□ -0.8
LAMA4-214ENST00000521187 NCOA2Q15596 1464 aa10.03□□□□□ -0.8
LAMA4-214ENST00000521187 PLB1Q6P1J6 1458 aa10.02□□□□□ -0.81
LAMA4-214ENST00000521187 KIAA0586Q9BVV6 1533 aa10.02□□□□□ -0.81
LAMA4-214ENST00000521187 MAPK8IP2Q13387 824 aaPredicted RBP10.02□□□□□ -0.81
LAMA4-214ENST00000521187 HIRIP3Q9BW71 556 aaPredicted RBP10.02□□□□□ -0.81
LAMA4-214ENST00000521187 DISP1Q96F81 1524 aa10.01□□□□□ -0.81
LAMA4-214ENST00000521187 FGD6Q6ZV73 1430 aa10.01□□□□□ -0.81
LAMA4-214ENST00000521187 CEP170Q5SW79 1584 aa10.01□□□□□ -0.81
LAMA4-214ENST00000521187 SYNJ2O15056 1496 aa10.01□□□□□ -0.81
LAMA4-214ENST00000521187 PTPRKQ15262 1439 aa10.01□□□□□ -0.81
LAMA4-214ENST00000521187 SETD5Q9C0A6 1442 aa10.01□□□□□ -0.81
LAMA4-214ENST00000521187 TRIM52Q96A61 297 aa10.01□□□□□ -0.81
LAMA4-214ENST00000521187 CFAP43Q8NDM7 1665 aa10.01□□□□□ -0.81
LAMA4-214ENST00000521187 YTHDC1Q96MU7 727 aaKnown RBP10□□□□□ -0.81
LAMA4-214ENST00000521187 EPRSP07814 1512 aaKnown RBP10□□□□□ -0.81
LAMA4-214ENST00000521187 MAP3K1Q13233 1512 aa10□□□□□ -0.81
LAMA4-214ENST00000521187 POTEDQ86YR6 584 aa9.98□□□□□ -0.81
LAMA4-214ENST00000521187 PRG4Q92954 1404 aaPredicted RBP9.98□□□□□ -0.81
LAMA4-214ENST00000521187 MAGI1Q96QZ7 1491 aaPredicted RBP9.98□□□□□ -0.81
LAMA4-214ENST00000521187 MYOM3Q5VTT5 1437 aa9.97□□□□□ -0.81
LAMA4-214ENST00000521187 UBE2Q2Q8WVN8 375 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms