RNA–Protein interactions for RNA: ENST00000521187.1

LAMA4-214, Transcript of laminin subunit alpha 4, humanhuman

TSL 2

Gene LAMA4, Length 2,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-214ENST00000521187 NISCHQ9Y2I1 1504 aa14.69□□□□□ -0.06
LAMA4-214ENST00000521187 CHIC1Q5VXU3 224 aa14.56□□□□□ -0.08
LAMA4-214ENST00000521187 AEBP2Q6ZN18 517 aaPredicted RBP14.29□□□□□ -0.12
LAMA4-214ENST00000521187 PHF23Q9BUL5 403 aaPredicted RBP12.98□□□□□ -0.33
LAMA4-214ENST00000521187 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
LAMA4-214ENST00000521187 SHROOM4Q9ULL8 1493 aa12.69□□□□□ -0.38
LAMA4-214ENST00000521187 CCDC180Q9P1Z9 1646 aa12.46□□□□□ -0.41
LAMA4-214ENST00000521187 ZCCHC6Q5VYS8 1495 aaKnown RBP12.32□□□□□ -0.44
LAMA4-214ENST00000521187 SUPT5HO00267 1087 aaKnown RBP12.3□□□□□ -0.44
LAMA4-214ENST00000521187 ABCC9O60706 1549 aa12.17□□□□□ -0.46
LAMA4-214ENST00000521187 PLPPR3Q6T4P5 718 aa12.11□□□□□ -0.47
LAMA4-214ENST00000521187 SCRIBQ14160 1630 aa11.91□□□□□ -0.5
LAMA4-214ENST00000521187 PELP1Q8IZL8 1130 aaKnown RBP11.9□□□□□ -0.5
LAMA4-214ENST00000521187 DCAF1Q9Y4B6 1507 aa11.87□□□□□ -0.51
LAMA4-214ENST00000521187 SENP3Q9H4L4 574 aaPredicted RBP11.87□□□□□ -0.51
LAMA4-214ENST00000521187 MYT1Q01538 1121 aa11.7□□□□□ -0.54
LAMA4-214ENST00000521187 PABPN1Q86U42 306 aaKnown RBP eCLIP11.7□□□□□ -0.54
LAMA4-214ENST00000521187 NACADO15069 1562 aa11.67□□□□□ -0.54
LAMA4-214ENST00000521187 CECR2Q9BXF3 1484 aa11.62□□□□□ -0.55
LAMA4-214ENST00000521187 MYO15BQ96JP2 1530 aa11.6□□□□□ -0.55
LAMA4-214ENST00000521187 RB1CC1Q8TDY2 1594 aa11.59□□□□□ -0.55
LAMA4-214ENST00000521187 RSF1Q96T23 1441 aaPredicted RBP11.58□□□□□ -0.56
LAMA4-214ENST00000521187 EHMT2Q96KQ7 1210 aa11.56□□□□□ -0.56
LAMA4-214ENST00000521187 MROH2BQ7Z745 1585 aa11.49□□□□□ -0.57
LAMA4-214ENST00000521187 ADRA2BP18089 450 aa11.47□□□□□ -0.57
LAMA4-214ENST00000521187 LOC105371045A0A1W2PR82 267 aa11.44□□□□□ -0.58
LAMA4-214ENST00000521187 KCNA4P22459 653 aa11.44□□□□□ -0.58
LAMA4-214ENST00000521187 FAM9AQ8IZU1 332 aaPredicted RBP11.44□□□□□ -0.58
LAMA4-214ENST00000521187 WIZO95785 1651 aa11.41□□□□□ -0.58
LAMA4-214ENST00000521187 UNC13AQ9UPW8 1703 aa11.4□□□□□ -0.58
LAMA4-214ENST00000521187 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
LAMA4-214ENST00000521187 BICRAQ9NZM4 1560 aa11.31□□□□□ -0.6
LAMA4-214ENST00000521187 BAZ1AQ9NRL2 1556 aaPredicted RBP11.28□□□□□ -0.6
LAMA4-214ENST00000521187 TTBK1Q5TCY1 1321 aaPredicted RBP11.25□□□□□ -0.61
LAMA4-214ENST00000521187 PPP6R1Q9UPN7 881 aa11.24□□□□□ -0.61
LAMA4-214ENST00000521187 SMARCA4P51532 1647 aa11.24□□□□□ -0.61
LAMA4-214ENST00000521187 CCDC88BA6NC98 1476 aa11.17□□□□□ -0.62
LAMA4-214ENST00000521187 ABCC8Q09428 1581 aa11.12□□□□□ -0.63
LAMA4-214ENST00000521187 TOP2AP11388 1531 aaKnown RBP11.12□□□□□ -0.63
LAMA4-214ENST00000521187 HRCP23327 699 aa11.12□□□□□ -0.63
LAMA4-214ENST00000521187 PCGF6Q9BYE7 350 aa11.11□□□□□ -0.63
LAMA4-214ENST00000521187 SMARCA2P51531 1590 aa11.09□□□□□ -0.63
LAMA4-214ENST00000521187 PPARGC1BQ86YN6 1023 aaKnown RBP11.08□□□□□ -0.64
LAMA4-214ENST00000521187 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
LAMA4-214ENST00000521187 ATAD2BQ9ULI0 1458 aa11.07□□□□□ -0.64
LAMA4-214ENST00000521187 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
LAMA4-214ENST00000521187 FOXD1Q16676 465 aa11.03□□□□□ -0.64
LAMA4-214ENST00000521187 RANGAP1P46060 587 aaPredicted RBP11□□□□□ -0.65
LAMA4-214ENST00000521187 EIF4G1Q04637 1599 aaKnown RBP10.98□□□□□ -0.65
LAMA4-214ENST00000521187 SOGA1O94964 1423 aa10.97□□□□□ -0.65
LAMA4-214ENST00000521187 SLC4A1APQ9BWU0 796 aaKnown RBP10.95□□□□□ -0.66
LAMA4-214ENST00000521187 RUSC2Q8N2Y8 1516 aa10.95□□□□□ -0.66
LAMA4-214ENST00000521187 PRKCSHP14314 528 aaPredicted RBP10.93□□□□□ -0.66
LAMA4-214ENST00000521187 UBTFP17480 764 aaKnown RBP10.93□□□□□ -0.66
LAMA4-214ENST00000521187 DNAJC5BQ9UF47 199 aa10.91□□□□□ -0.66
LAMA4-214ENST00000521187 PEG3Q9GZU2 1588 aa10.91□□□□□ -0.66
LAMA4-214ENST00000521187 WRNQ14191 1432 aaPredicted RBP eCLIP10.9□□□□□ -0.66
LAMA4-214ENST00000521187 SCAF1Q9H7N4 1312 aaKnown RBP10.89□□□□□ -0.67
LAMA4-214ENST00000521187 NCAPD3P42695 1498 aa10.85□□□□□ -0.67
LAMA4-214ENST00000521187 SYNJ1O43426 1573 aa10.83□□□□□ -0.68
LAMA4-214ENST00000521187 CC2D2AQ9P2K1 1620 aa10.82□□□□□ -0.68
LAMA4-214ENST00000521187 PPP4R3CPQ6ZMV5 832 aa10.8□□□□□ -0.68
LAMA4-214ENST00000521187 TRIM26Q12899 539 aaPredicted RBP10.8□□□□□ -0.68
LAMA4-214ENST00000521187 HMGXB3Q12766 1538 aa10.75□□□□□ -0.69
LAMA4-214ENST00000521187 NESP48681 1621 aa10.74□□□□□ -0.69
LAMA4-214ENST00000521187 BCL11AQ9H165 835 aa10.74□□□□□ -0.69
LAMA4-214ENST00000521187 CEP162Q5TB80 1403 aa10.72□□□□□ -0.69
LAMA4-214ENST00000521187 ERICH6Q7L0X2 663 aa10.71□□□□□ -0.7
LAMA4-214ENST00000521187 CADPSQ9ULU8 1353 aa10.7□□□□□ -0.7
LAMA4-214ENST00000521187 CFTRP13569 1480 aa10.7□□□□□ -0.7
LAMA4-214ENST00000521187 CUX1P39880 1505 aa10.69□□□□□ -0.7
LAMA4-214ENST00000521187 APLP2Q06481 763 aa10.68□□□□□ -0.7
LAMA4-214ENST00000521187 RAPGEF2Q9Y4G8 1499 aa10.68□□□□□ -0.7
LAMA4-214ENST00000521187 TNIKQ9UKE5 1360 aa10.65□□□□□ -0.7
LAMA4-214ENST00000521187 GOLGA3Q08378 1498 aa10.65□□□□□ -0.7
LAMA4-214ENST00000521187 TOP2BQ02880 1626 aa10.64□□□□□ -0.71
LAMA4-214ENST00000521187 EEA1Q15075 1411 aa10.64□□□□□ -0.71
LAMA4-214ENST00000521187 NCBP3Q53F19 620 aaKnown RBP10.63□□□□□ -0.71
LAMA4-214ENST00000521187 FANCD2Q9BXW9 1451 aa10.61□□□□□ -0.71
LAMA4-214ENST00000521187 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.61□□□□□ -0.71
LAMA4-214ENST00000521187 P3H3Q8IVL6 736 aa10.61□□□□□ -0.71
LAMA4-214ENST00000521187 CEP164Q9UPV0 1460 aa10.6□□□□□ -0.71
LAMA4-214ENST00000521187 NPM3O75607 178 aaKnown RBP10.6□□□□□ -0.71
LAMA4-214ENST00000521187 CUX2O14529 1486 aa10.6□□□□□ -0.71
LAMA4-214ENST00000521187 ZBTB22O15209 634 aa10.59□□□□□ -0.71
LAMA4-214ENST00000521187 CLIP1P30622 1438 aa10.59□□□□□ -0.71
LAMA4-214ENST00000521187 RAD54L2Q9Y4B4 1467 aa10.59□□□□□ -0.71
LAMA4-214ENST00000521187 FGD5Q6ZNL6 1462 aa10.58□□□□□ -0.72
LAMA4-214ENST00000521187 KIF27Q86VH2 1401 aa10.57□□□□□ -0.72
LAMA4-214ENST00000521187 ATP1B4Q9UN42 357 aaPredicted RBP10.57□□□□□ -0.72
LAMA4-214ENST00000521187 BIVM-ERCC5R4GMW8 1640 aa10.56□□□□□ -0.72
LAMA4-214ENST00000521187 HNRNPUL2Q1KMD3 747 aaKnown RBP10.56□□□□□ -0.72
LAMA4-214ENST00000521187 PIAS4Q8N2W9 510 aaPredicted RBP10.54□□□□□ -0.72
LAMA4-214ENST00000521187 TDRD9Q8NDG6 1382 aaKnown RBP10.53□□□□□ -0.72
LAMA4-214ENST00000521187 IGF1RP08069 1367 aa10.52□□□□□ -0.73
LAMA4-214ENST00000521187 CCER1Q8TC90 406 aaPredicted RBP10.51□□□□□ -0.73
LAMA4-214ENST00000521187 KIF21BO75037 1637 aa10.5□□□□□ -0.73
LAMA4-214ENST00000521187 SLC24A1O60721 1099 aa10.5□□□□□ -0.73
LAMA4-214ENST00000521187 PRXQ9BXM0 1461 aa10.49□□□□□ -0.73
LAMA4-214ENST00000521187 CARMIL1Q5VZK9 1371 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms