RNA–Protein interactions for RNA: ENST00000519634.5

CTNNA1-217, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-217ENST00000519634 SOGA1O94964 1423 aa12.15□□□□□ -0.46
CTNNA1-217ENST00000519634 SNAPC4Q5SXM2 1469 aa12.14□□□□□ -0.47
CTNNA1-217ENST00000519634 RAD54L2Q9Y4B4 1467 aa12.14□□□□□ -0.47
CTNNA1-217ENST00000519634 CLASP1Q7Z460 1538 aa12.13□□□□□ -0.47
CTNNA1-217ENST00000519634 RNF39Q9H2S5 420 aa12.13□□□□□ -0.47
CTNNA1-217ENST00000519634 MAGI1Q96QZ7 1491 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-217ENST00000519634 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-217ENST00000519634 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
CTNNA1-217ENST00000519634 SYNJ1O43426 1573 aa12.1□□□□□ -0.47
CTNNA1-217ENST00000519634 GRIN2BQ13224 1484 aa12.08□□□□□ -0.47
CTNNA1-217ENST00000519634 SYNJ2O15056 1496 aa12.08□□□□□ -0.48
CTNNA1-217ENST00000519634 GAPVD1Q14C86 1478 aa12.08□□□□□ -0.48
CTNNA1-217ENST00000519634 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
CTNNA1-217ENST00000519634 SAMD1Q6SPF0 538 aaPredicted RBP12.06□□□□□ -0.48
CTNNA1-217ENST00000519634 FGD5Q6ZNL6 1462 aa12.04□□□□□ -0.48
CTNNA1-217ENST00000519634 ATXN8OSP0DMR3 200 aa12.04□□□□□ -0.48
CTNNA1-217ENST00000519634 C1QBPQ07021 282 aaKnown RBP12.01□□□□□ -0.49
CTNNA1-217ENST00000519634 CUX1P39880 1505 aa11.97□□□□□ -0.49
CTNNA1-217ENST00000519634 APLP2Q06481 763 aa11.96□□□□□ -0.49
CTNNA1-217ENST00000519634 ABCA10Q8WWZ4 1543 aa11.91□□□□□ -0.5
CTNNA1-217ENST00000519634 GRIN2AQ12879 1464 aa11.9□□□□□ -0.5
CTNNA1-217ENST00000519634 NUP160Q12769 1436 aa11.9□□□□□ -0.5
CTNNA1-217ENST00000519634 ERCC6L2Q5T890 1561 aa11.89□□□□□ -0.51
CTNNA1-217ENST00000519634 CEP170Q5SW79 1584 aa11.87□□□□□ -0.51
CTNNA1-217ENST00000519634 FAM69CQ0P6D2 419 aa11.85□□□□□ -0.51
CTNNA1-217ENST00000519634 ATF5Q9Y2D1 282 aaPredicted RBP11.85□□□□□ -0.51
CTNNA1-217ENST00000519634 ABCA5Q8WWZ7 1642 aa11.85□□□□□ -0.51
CTNNA1-217ENST00000519634 FHAD1B1AJZ9 1412 aa11.84□□□□□ -0.51
CTNNA1-217ENST00000519634 PBRM1Q86U86 1689 aa11.84□□□□□ -0.51
CTNNA1-217ENST00000519634 NPM1P06748 294 aaKnown RBP eCLIP11.83□□□□□ -0.52
CTNNA1-217ENST00000519634 WRNQ14191 1432 aaPredicted RBP eCLIP11.83□□□□□ -0.52
CTNNA1-217ENST00000519634 KDM4FA0A1W2PPD8 638 aa11.82□□□□□ -0.52
CTNNA1-217ENST00000519634 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-217ENST00000519634 PRG4Q92954 1404 aaPredicted RBP11.82□□□□□ -0.52
CTNNA1-217ENST00000519634 JPH4Q96JJ6 628 aa11.81□□□□□ -0.52
CTNNA1-217ENST00000519634 ABCC10Q5T3U5 1492 aa11.81□□□□□ -0.52
CTNNA1-217ENST00000519634 ADAMTS12P58397 1594 aa11.8□□□□□ -0.52
CTNNA1-217ENST00000519634 SPINK5Q9NQ38 1064 aaPredicted RBP11.79□□□□□ -0.52
CTNNA1-217ENST00000519634 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
CTNNA1-217ENST00000519634 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-217ENST00000519634 MAPKBP1O60336 1514 aa11.75□□□□□ -0.53
CTNNA1-217ENST00000519634 CAPN15O75808 1086 aa11.74□□□□□ -0.53
CTNNA1-217ENST00000519634 ERICH3Q5RHP9 1530 aa11.74□□□□□ -0.53
CTNNA1-217ENST00000519634 KIF13AQ9H1H9 1805 aa11.72□□□□□ -0.53
CTNNA1-217ENST00000519634 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
CTNNA1-217ENST00000519634 DIP2BQ9P265 1576 aa11.7□□□□□ -0.54
CTNNA1-217ENST00000519634 KDM6BO15054 1643 aa11.69□□□□□ -0.54
CTNNA1-217ENST00000519634 TOP2BQ02880 1626 aa11.66□□□□□ -0.54
CTNNA1-217ENST00000519634 ADCY10Q96PN6 1610 aa11.64□□□□□ -0.55
CTNNA1-217ENST00000519634 RUSC2Q8N2Y8 1516 aa11.63□□□□□ -0.55
CTNNA1-217ENST00000519634 KIAA0586Q9BVV6 1533 aa11.62□□□□□ -0.55
CTNNA1-217ENST00000519634 PTPRGP23470 1445 aa11.61□□□□□ -0.55
CTNNA1-217ENST00000519634 BIVM-ERCC5R4GMW8 1640 aa11.61□□□□□ -0.55
CTNNA1-217ENST00000519634 ADGRL1O94910 1474 aa11.6□□□□□ -0.55
CTNNA1-217ENST00000519634 SUPT5HO00267 1087 aaKnown RBP11.58□□□□□ -0.56
CTNNA1-217ENST00000519634 PLB1Q6P1J6 1458 aa11.57□□□□□ -0.56
CTNNA1-217ENST00000519634 IGF1RP08069 1367 aa11.56□□□□□ -0.56
CTNNA1-217ENST00000519634 ABCC2Q92887 1545 aa11.56□□□□□ -0.56
CTNNA1-217ENST00000519634 DSG3P32926 999 aa11.56□□□□□ -0.56
CTNNA1-217ENST00000519634 POLA2Q14181 598 aa11.56□□□□□ -0.56
CTNNA1-217ENST00000519634 ASXL2Q76L83 1435 aa11.56□□□□□ -0.56
CTNNA1-217ENST00000519634 TNIKQ9UKE5 1360 aa11.55□□□□□ -0.56
CTNNA1-217ENST00000519634 TTBK1Q5TCY1 1321 aaPredicted RBP11.55□□□□□ -0.56
CTNNA1-217ENST00000519634 CARMIL2Q6F5E8 1435 aa11.54□□□□□ -0.56
CTNNA1-217ENST00000519634 GLI2P10070 1586 aa11.54□□□□□ -0.56
CTNNA1-217ENST00000519634 HECW2Q9P2P5 1572 aa11.52□□□□□ -0.57
CTNNA1-217ENST00000519634 KIF27Q86VH2 1401 aa11.52□□□□□ -0.57
CTNNA1-217ENST00000519634 COL17A1Q9UMD9 1497 aaPredicted RBP11.51□□□□□ -0.57
CTNNA1-217ENST00000519634 TSPOAP1O95153 1857 aa11.51□□□□□ -0.57
CTNNA1-217ENST00000519634 UHRF1BP1LA0JNW5 1464 aa11.51□□□□□ -0.57
CTNNA1-217ENST00000519634 TEX14Q8IWB6 1497 aa11.51□□□□□ -0.57
CTNNA1-217ENST00000519634 ABCB7O75027 752 aa11.5□□□□□ -0.57
CTNNA1-217ENST00000519634 FBXO41Q8TF61 875 aa11.49□□□□□ -0.57
CTNNA1-217ENST00000519634 UACAQ9BZF9 1416 aa11.49□□□□□ -0.57
CTNNA1-217ENST00000519634 CARMIL1Q5VZK9 1371 aa11.48□□□□□ -0.57
CTNNA1-217ENST00000519634 EPRSP07814 1512 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-217ENST00000519634 PPRC1Q5VV67 1664 aaKnown RBP11.45□□□□□ -0.58
CTNNA1-217ENST00000519634 KDM5BQ9UGL1 1544 aa11.45□□□□□ -0.58
CTNNA1-217ENST00000519634 CUL7Q14999 1698 aa11.44□□□□□ -0.58
CTNNA1-217ENST00000519634 ZBTB12Q9Y330 459 aaPredicted RBP11.42□□□□□ -0.58
CTNNA1-217ENST00000519634 MAP3K4Q9Y6R4 1608 aa11.4□□□□□ -0.58
CTNNA1-217ENST00000519634 IQGAP2Q13576 1575 aa11.4□□□□□ -0.58
CTNNA1-217ENST00000519634 DISP1Q96F81 1524 aa11.4□□□□□ -0.59
CTNNA1-217ENST00000519634 WDR7Q9Y4E6 1490 aa11.39□□□□□ -0.59
CTNNA1-217ENST00000519634 CD109Q6YHK3 1445 aa11.38□□□□□ -0.59
CTNNA1-217ENST00000519634 MAGI3Q5TCQ9 1506 aa11.37□□□□□ -0.59
CTNNA1-217ENST00000519634 MKRN4PQ13434 485 aaPredicted RBP11.35□□□□□ -0.59
CTNNA1-217ENST00000519634 KCNH8Q96L42 1107 aa11.35□□□□□ -0.59
CTNNA1-217ENST00000519634 UGGT2Q9NYU1 1516 aa11.35□□□□□ -0.59
CTNNA1-217ENST00000519634 ZCCHC11Q5TAX3 1644 aaKnown RBP11.32□□□□□ -0.6
CTNNA1-217ENST00000519634 RAPGEF2Q9Y4G8 1499 aa11.31□□□□□ -0.6
CTNNA1-217ENST00000519634 PTPRMP28827 1452 aa11.3□□□□□ -0.6
CTNNA1-217ENST00000519634 ARAP3Q8WWN8 1544 aa11.29□□□□□ -0.6
CTNNA1-217ENST00000519634 PHLDB1Q86UU1 1377 aa11.28□□□□□ -0.6
CTNNA1-217ENST00000519634 KIAA0556O60303 1618 aa11.28□□□□□ -0.6
CTNNA1-217ENST00000519634 FAM9AQ8IZU1 332 aaPredicted RBP11.26□□□□□ -0.61
CTNNA1-217ENST00000519634 GOLGA3Q08378 1498 aa11.25□□□□□ -0.61
CTNNA1-217ENST00000519634 LMTK3Q96Q04 1460 aa11.25□□□□□ -0.61
CTNNA1-217ENST00000519634 CFAP43Q8NDM7 1665 aa11.24□□□□□ -0.61
CTNNA1-217ENST00000519634 ARID4BQ4LE39 1312 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 160.5 ms