RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 PITPNM1O00562 1244 aa17.85■□□□□ 0.45
TTC1-202ENST00000518560 FXR2P51116 673 aaKnown RBP eCLIP17.78■□□□□ 0.44
TTC1-202ENST00000518560 ATXN8OSP0DMR3 200 aa17.7■□□□□ 0.42
TTC1-202ENST00000518560 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
TTC1-202ENST00000518560 FBLN2P98095 1184 aa17.66■□□□□ 0.42
TTC1-202ENST00000518560 ZBTB22O15209 634 aa17.65■□□□□ 0.42
TTC1-202ENST00000518560 DNMBPQ6XZF7 1577 aa17.64■□□□□ 0.41
TTC1-202ENST00000518560 ZNF608Q9ULD9 1512 aaPredicted RBP17.63■□□□□ 0.41
TTC1-202ENST00000518560 SPDYE2BA6NHP3 402 aa17.63■□□□□ 0.41
TTC1-202ENST00000518560 SPDYE6P0CI01 402 aa17.63■□□□□ 0.41
TTC1-202ENST00000518560 SPDYE2Q495Y8 402 aa17.63■□□□□ 0.41
TTC1-202ENST00000518560 IFT140Q96RY7 1462 aa17.59■□□□□ 0.41
TTC1-202ENST00000518560 EIF4G3O43432 1585 aaKnown RBP17.57■□□□□ 0.4
TTC1-202ENST00000518560 TARBP1Q13395 1621 aaKnown RBP17.54■□□□□ 0.4
TTC1-202ENST00000518560 ABCC8Q09428 1581 aa17.54■□□□□ 0.4
TTC1-202ENST00000518560 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
TTC1-202ENST00000518560 POLA1P09884 1462 aaPredicted RBP17.51■□□□□ 0.39
TTC1-202ENST00000518560 CLEC11AQ9Y240 323 aa17.48■□□□□ 0.39
TTC1-202ENST00000518560 RAD54L2Q9Y4B4 1467 aa17.47■□□□□ 0.39
TTC1-202ENST00000518560 CHD1O14646 1710 aa17.47■□□□□ 0.39
TTC1-202ENST00000518560 CUX1P39880 1505 aa17.47■□□□□ 0.39
TTC1-202ENST00000518560 SPDYE1Q8NFV5 336 aaPredicted RBP17.46■□□□□ 0.39
TTC1-202ENST00000518560 AQRO60306 1485 aaKnown RBP eCLIP17.45■□□□□ 0.38
TTC1-202ENST00000518560 EVX2Q03828 476 aa17.45■□□□□ 0.38
TTC1-202ENST00000518560 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
TTC1-202ENST00000518560 PRKAR2AP13861 404 aaKnown RBP17.44■□□□□ 0.38
TTC1-202ENST00000518560 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
TTC1-202ENST00000518560 SOGA1O94964 1423 aa17.38■□□□□ 0.37
TTC1-202ENST00000518560 WDR97A6NE52 1622 aa17.38■□□□□ 0.37
TTC1-202ENST00000518560 RIMBP3CA6NJZ7 1639 aa17.38■□□□□ 0.37
TTC1-202ENST00000518560 RIMBP3BA6NNM3 1639 aa17.38■□□□□ 0.37
TTC1-202ENST00000518560 RIMBP3Q9UFD9 1639 aa17.38■□□□□ 0.37
TTC1-202ENST00000518560 ZNF692Q9BU19 519 aaPredicted RBP17.37■□□□□ 0.37
TTC1-202ENST00000518560 TDRD9Q8NDG6 1382 aaKnown RBP17.36■□□□□ 0.37
TTC1-202ENST00000518560 PBRM1Q86U86 1689 aa17.31■□□□□ 0.36
TTC1-202ENST00000518560 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
TTC1-202ENST00000518560 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
TTC1-202ENST00000518560 MKRN4PQ13434 485 aaPredicted RBP17.29■□□□□ 0.36
TTC1-202ENST00000518560 SSUH2Q9Y2M2 353 aa17.27■□□□□ 0.36
TTC1-202ENST00000518560 BIVM-ERCC5R4GMW8 1640 aa17.25■□□□□ 0.35
TTC1-202ENST00000518560 SYNJ1O43426 1573 aa17.24■□□□□ 0.35
TTC1-202ENST00000518560 ABCA5Q8WWZ7 1642 aa17.24■□□□□ 0.35
TTC1-202ENST00000518560 C19orf67A6NJJ6 358 aa17.23■□□□□ 0.35
TTC1-202ENST00000518560 GRIN2BQ13224 1484 aa17.22■□□□□ 0.35
TTC1-202ENST00000518560 TOP2BQ02880 1626 aa17.21■□□□□ 0.35
TTC1-202ENST00000518560 MAGI1Q96QZ7 1491 aaPredicted RBP17.2■□□□□ 0.34
TTC1-202ENST00000518560 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
TTC1-202ENST00000518560 GAPVD1Q14C86 1478 aa17.19■□□□□ 0.34
TTC1-202ENST00000518560 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
TTC1-202ENST00000518560 WRNQ14191 1432 aaPredicted RBP eCLIP17.17■□□□□ 0.34
TTC1-202ENST00000518560 SYNJ2O15056 1496 aa17.15■□□□□ 0.34
TTC1-202ENST00000518560 ARAP1Q96P48 1450 aa17.15■□□□□ 0.34
TTC1-202ENST00000518560 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
TTC1-202ENST00000518560 CHMP7Q8WUX9 453 aaPredicted RBP17.12■□□□□ 0.33
TTC1-202ENST00000518560 GABBR2O75899 941 aa17.11■□□□□ 0.33
TTC1-202ENST00000518560 CHADLQ6NUI6 762 aa17.11■□□□□ 0.33
TTC1-202ENST00000518560 ADAMTS12P58397 1594 aa17.1■□□□□ 0.33
TTC1-202ENST00000518560 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
TTC1-202ENST00000518560 GRIN2AQ12879 1464 aa17.03■□□□□ 0.32
TTC1-202ENST00000518560 CEP170Q5SW79 1584 aa17.02■□□□□ 0.32
TTC1-202ENST00000518560 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
TTC1-202ENST00000518560 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
TTC1-202ENST00000518560 LHX8Q68G74 356 aa16.97■□□□□ 0.31
TTC1-202ENST00000518560 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.3
TTC1-202ENST00000518560 NUP160Q12769 1436 aa16.95■□□□□ 0.3
TTC1-202ENST00000518560 SHROOM2Q13796 1616 aa16.92■□□□□ 0.3
TTC1-202ENST00000518560 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
TTC1-202ENST00000518560 CD44P16070 742 aaKnown RBP16.86■□□□□ 0.29
TTC1-202ENST00000518560 FARP1Q9Y4F1 1045 aaPredicted RBP16.83■□□□□ 0.28
TTC1-202ENST00000518560 CUL7Q14999 1698 aa16.81■□□□□ 0.28
TTC1-202ENST00000518560 KIF27Q86VH2 1401 aa16.79■□□□□ 0.28
TTC1-202ENST00000518560 CLCN6P51797 869 aa16.78■□□□□ 0.28
TTC1-202ENST00000518560 PRG4Q92954 1404 aaPredicted RBP16.78■□□□□ 0.28
TTC1-202ENST00000518560 IGF1RP08069 1367 aa16.77■□□□□ 0.27
TTC1-202ENST00000518560 JPH4Q96JJ6 628 aa16.71■□□□□ 0.27
TTC1-202ENST00000518560 KIAA0586Q9BVV6 1533 aa16.69■□□□□ 0.26
TTC1-202ENST00000518560 CARMIL1Q5VZK9 1371 aa16.67■□□□□ 0.26
TTC1-202ENST00000518560 KIF13AQ9H1H9 1805 aa16.66■□□□□ 0.26
TTC1-202ENST00000518560 POTEIP0CG38 1075 aa16.66■□□□□ 0.26
TTC1-202ENST00000518560 DCBLD2Q96PD2 775 aa16.66■□□□□ 0.26
TTC1-202ENST00000518560 ADCY10Q96PN6 1610 aa16.65■□□□□ 0.26
TTC1-202ENST00000518560 IQGAP2Q13576 1575 aa16.61■□□□□ 0.25
TTC1-202ENST00000518560 STAG3Q9UJ98 1225 aa16.58■□□□□ 0.24
TTC1-202ENST00000518560 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
TTC1-202ENST00000518560 RAPGEF2Q9Y4G8 1499 aa16.55■□□□□ 0.24
TTC1-202ENST00000518560 TTBK1Q5TCY1 1321 aaPredicted RBP16.55■□□□□ 0.24
TTC1-202ENST00000518560 CTTNBP2Q8WZ74 1663 aa16.55■□□□□ 0.24
TTC1-202ENST00000518560 ZNF579Q8NAF0 562 aaKnown RBP16.54■□□□□ 0.24
TTC1-202ENST00000518560 MAPKBP1O60336 1514 aa16.52■□□□□ 0.24
TTC1-202ENST00000518560 DIP2BQ9P265 1576 aa16.51■□□□□ 0.23
TTC1-202ENST00000518560 DISP1Q96F81 1524 aa16.51■□□□□ 0.23
TTC1-202ENST00000518560 PTPRGP23470 1445 aa16.49■□□□□ 0.23
TTC1-202ENST00000518560 KIAA0556O60303 1618 aa16.48■□□□□ 0.23
TTC1-202ENST00000518560 CARMIL2Q6F5E8 1435 aa16.48■□□□□ 0.23
TTC1-202ENST00000518560 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
TTC1-202ENST00000518560 CREBZFQ9NS37 354 aa16.48■□□□□ 0.23
TTC1-202ENST00000518560 TNIKQ9UKE5 1360 aa16.48■□□□□ 0.23
TTC1-202ENST00000518560 TSPOAP1O95153 1857 aa16.48■□□□□ 0.23
TTC1-202ENST00000518560 ABCC10Q5T3U5 1492 aa16.48■□□□□ 0.23
TTC1-202ENST00000518560 UGGT2Q9NYU1 1516 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms