RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
LINC00535-202ENST00000517785 SPDYE6P0CI01 402 aa11.24□□□□□ -0.61
LINC00535-202ENST00000517785 SPDYE2Q495Y8 402 aa11.24□□□□□ -0.61
LINC00535-202ENST00000517785 CYB5RLQ6IPT4 315 aa11.23□□□□□ -0.61
LINC00535-202ENST00000517785 PIP4P2Q8N4L2 257 aa11.22□□□□□ -0.61
LINC00535-202ENST00000517785 URB2Q14146 1524 aaKnown RBP11.2□□□□□ -0.62
LINC00535-202ENST00000517785 CSRNP3Q8WYN3 585 aa11.2□□□□□ -0.62
LINC00535-202ENST00000517785 WIZO95785 1651 aa11.19□□□□□ -0.62
LINC00535-202ENST00000517785 ZNF608Q9ULD9 1512 aaPredicted RBP11.16□□□□□ -0.62
LINC00535-202ENST00000517785 FXR2P51116 673 aaKnown RBP eCLIP11.16□□□□□ -0.62
LINC00535-202ENST00000517785 ARAP1Q96P48 1450 aa11.13□□□□□ -0.63
LINC00535-202ENST00000517785 CFTRP13569 1480 aa11.12□□□□□ -0.63
LINC00535-202ENST00000517785 ZNF692Q9BU19 519 aaPredicted RBP11.1□□□□□ -0.63
LINC00535-202ENST00000517785 SSUH2Q9Y2M2 353 aa11.1□□□□□ -0.63
LINC00535-202ENST00000517785 CHD1O14646 1710 aa11.09□□□□□ -0.63
LINC00535-202ENST00000517785 EIF4G3O43432 1585 aaKnown RBP11.07□□□□□ -0.64
LINC00535-202ENST00000517785 IFT140Q96RY7 1462 aa11.06□□□□□ -0.64
LINC00535-202ENST00000517785 SP7Q8TDD2 431 aaPredicted RBP11.05□□□□□ -0.64
LINC00535-202ENST00000517785 SPDYE1Q8NFV5 336 aaPredicted RBP11.04□□□□□ -0.64
LINC00535-202ENST00000517785 EHMT2Q96KQ7 1210 aa11.03□□□□□ -0.64
LINC00535-202ENST00000517785 CLEC11AQ9Y240 323 aa11.02□□□□□ -0.65
LINC00535-202ENST00000517785 PRDM2Q13029 1718 aa11.01□□□□□ -0.65
LINC00535-202ENST00000517785 HAX1O00165 279 aa11□□□□□ -0.65
LINC00535-202ENST00000517785 AQRO60306 1485 aaKnown RBP eCLIP11□□□□□ -0.65
LINC00535-202ENST00000517785 TOPBP1Q92547 1522 aa10.99□□□□□ -0.65
LINC00535-202ENST00000517785 RSF1Q96T23 1441 aaPredicted RBP10.99□□□□□ -0.65
LINC00535-202ENST00000517785 TOP2AP11388 1531 aaKnown RBP10.97□□□□□ -0.65
LINC00535-202ENST00000517785 PRKAR2AP13861 404 aaKnown RBP10.95□□□□□ -0.66
LINC00535-202ENST00000517785 TARBP1Q13395 1621 aaKnown RBP10.92□□□□□ -0.66
LINC00535-202ENST00000517785 DNMBPQ6XZF7 1577 aa10.9□□□□□ -0.66
LINC00535-202ENST00000517785 CLASP1Q7Z460 1538 aa10.89□□□□□ -0.67
LINC00535-202ENST00000517785 EVX2Q03828 476 aa10.89□□□□□ -0.67
LINC00535-202ENST00000517785 SNAPC4Q5SXM2 1469 aa10.87□□□□□ -0.67
LINC00535-202ENST00000517785 RAD54L2Q9Y4B4 1467 aa10.87□□□□□ -0.67
LINC00535-202ENST00000517785 TDRD9Q8NDG6 1382 aaKnown RBP10.86□□□□□ -0.67
LINC00535-202ENST00000517785 CCDC88BA6NC98 1476 aa10.86□□□□□ -0.67
LINC00535-202ENST00000517785 POLA1P09884 1462 aaPredicted RBP10.86□□□□□ -0.67
LINC00535-202ENST00000517785 ABCC8Q09428 1581 aa10.86□□□□□ -0.67
LINC00535-202ENST00000517785 SYNJ1O43426 1573 aa10.85□□□□□ -0.67
LINC00535-202ENST00000517785 PRR29P0C7W0 189 aa10.84□□□□□ -0.67
LINC00535-202ENST00000517785 GAPVD1Q14C86 1478 aa10.83□□□□□ -0.68
LINC00535-202ENST00000517785 CHADLQ6NUI6 762 aa10.83□□□□□ -0.68
LINC00535-202ENST00000517785 ILDR1Q86SU0 546 aaPredicted RBP10.83□□□□□ -0.68
LINC00535-202ENST00000517785 CHMP7Q8WUX9 453 aaPredicted RBP10.83□□□□□ -0.68
LINC00535-202ENST00000517785 C19orf67A6NJJ6 358 aa10.79□□□□□ -0.68
LINC00535-202ENST00000517785 SOGA1O94964 1423 aa10.78□□□□□ -0.68
LINC00535-202ENST00000517785 ERCC6L2Q5T890 1561 aa10.77□□□□□ -0.69
LINC00535-202ENST00000517785 MAGI1Q96QZ7 1491 aaPredicted RBP10.75□□□□□ -0.69
LINC00535-202ENST00000517785 SYNJ2O15056 1496 aa10.74□□□□□ -0.69
LINC00535-202ENST00000517785 KIF13AQ9H1H9 1805 aa10.74□□□□□ -0.69
LINC00535-202ENST00000517785 FGD5Q6ZNL6 1462 aa10.74□□□□□ -0.69
LINC00535-202ENST00000517785 GRIN2BQ13224 1484 aa10.73□□□□□ -0.69
LINC00535-202ENST00000517785 PBRM1Q86U86 1689 aa10.72□□□□□ -0.69
LINC00535-202ENST00000517785 WDR97A6NE52 1622 aa10.7□□□□□ -0.7
LINC00535-202ENST00000517785 SPDYE4A6NLX3 237 aa10.69□□□□□ -0.7
LINC00535-202ENST00000517785 KDM4FA0A1W2PPD8 638 aa10.68□□□□□ -0.7
LINC00535-202ENST00000517785 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
LINC00535-202ENST00000517785 CUX1P39880 1505 aa10.66□□□□□ -0.7
LINC00535-202ENST00000517785 CEP170Q5SW79 1584 aa10.65□□□□□ -0.7
LINC00535-202ENST00000517785 GABBR2O75899 941 aa10.63□□□□□ -0.71
LINC00535-202ENST00000517785 STAG3Q9UJ98 1225 aa10.63□□□□□ -0.71
LINC00535-202ENST00000517785 FAM69CQ0P6D2 419 aa10.62□□□□□ -0.71
LINC00535-202ENST00000517785 GRIN2AQ12879 1464 aa10.61□□□□□ -0.71
LINC00535-202ENST00000517785 TSPOAP1O95153 1857 aa10.6□□□□□ -0.71
LINC00535-202ENST00000517785 ABCA5Q8WWZ7 1642 aa10.6□□□□□ -0.71
LINC00535-202ENST00000517785 KDM6BO15054 1643 aa10.59□□□□□ -0.71
LINC00535-202ENST00000517785 CD44P16070 742 aaKnown RBP10.59□□□□□ -0.71
LINC00535-202ENST00000517785 CREBZFQ9NS37 354 aa10.59□□□□□ -0.71
LINC00535-202ENST00000517785 SHROOM2Q13796 1616 aa10.58□□□□□ -0.72
LINC00535-202ENST00000517785 NUP160Q12769 1436 aa10.57□□□□□ -0.72
LINC00535-202ENST00000517785 ADAMTS12P58397 1594 aa10.56□□□□□ -0.72
LINC00535-202ENST00000517785 DIP2BQ9P265 1576 aa10.56□□□□□ -0.72
LINC00535-202ENST00000517785 ABCC10Q5T3U5 1492 aa10.56□□□□□ -0.72
LINC00535-202ENST00000517785 ABCA10Q8WWZ4 1543 aa10.54□□□□□ -0.72
LINC00535-202ENST00000517785 PRG4Q92954 1404 aaPredicted RBP10.54□□□□□ -0.72
LINC00535-202ENST00000517785 HECW2Q9P2P5 1572 aa10.52□□□□□ -0.73
LINC00535-202ENST00000517785 ADGRL1O94910 1474 aa10.5□□□□□ -0.73
LINC00535-202ENST00000517785 MAPKBP1O60336 1514 aa10.5□□□□□ -0.73
LINC00535-202ENST00000517785 NPM1P06748 294 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC00535-202ENST00000517785 ADCY10Q96PN6 1610 aa10.49□□□□□ -0.73
LINC00535-202ENST00000517785 FHAD1B1AJZ9 1412 aa10.47□□□□□ -0.73
LINC00535-202ENST00000517785 PROM2Q8N271 834 aa10.46□□□□□ -0.73
LINC00535-202ENST00000517785 JPH4Q96JJ6 628 aa10.46□□□□□ -0.73
LINC00535-202ENST00000517785 ZRANB1Q9UGI0 708 aa10.45□□□□□ -0.74
LINC00535-202ENST00000517785 CLCN6P51797 869 aa10.44□□□□□ -0.74
LINC00535-202ENST00000517785 ZNF579Q8NAF0 562 aaKnown RBP10.44□□□□□ -0.74
LINC00535-202ENST00000517785 RUSC2Q8N2Y8 1516 aa10.43□□□□□ -0.74
LINC00535-202ENST00000517785 POTEIP0CG38 1075 aa10.42□□□□□ -0.74
LINC00535-202ENST00000517785 WRNQ14191 1432 aaPredicted RBP eCLIP10.41□□□□□ -0.74
LINC00535-202ENST00000517785 TTBK1Q5TCY1 1321 aaPredicted RBP10.41□□□□□ -0.74
LINC00535-202ENST00000517785 MNX1P50219 401 aaPredicted RBP10.41□□□□□ -0.74
LINC00535-202ENST00000517785 PPRC1Q5VV67 1664 aaKnown RBP10.4□□□□□ -0.74
LINC00535-202ENST00000517785 ERICH3Q5RHP9 1530 aa10.39□□□□□ -0.75
LINC00535-202ENST00000517785 FBXO41Q8TF61 875 aa10.38□□□□□ -0.75
LINC00535-202ENST00000517785 LHX8Q68G74 356 aa10.36□□□□□ -0.75
LINC00535-202ENST00000517785 COL17A1Q9UMD9 1497 aaPredicted RBP10.36□□□□□ -0.75
LINC00535-202ENST00000517785 BIVM-ERCC5R4GMW8 1640 aa10.35□□□□□ -0.75
LINC00535-202ENST00000517785 TOP2BQ02880 1626 aa10.34□□□□□ -0.75
LINC00535-202ENST00000517785 PAK3O75914 559 aaPredicted RBP10.34□□□□□ -0.75
LINC00535-202ENST00000517785 DCBLD2Q96PD2 775 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms