RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 AEBP2Q6ZN18 517 aaPredicted RBP20.71■□□□□ 0.91
LINC00535-202ENST00000517785 CHIC1Q5VXU3 224 aa19.65■□□□□ 0.74
LINC00535-202ENST00000517785 SENP3Q9H4L4 574 aaPredicted RBP17.65■□□□□ 0.42
LINC00535-202ENST00000517785 PHF23Q9BUL5 403 aaPredicted RBP17.43■□□□□ 0.38
LINC00535-202ENST00000517785 FOXD1Q16676 465 aa16.47■□□□□ 0.23
LINC00535-202ENST00000517785 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
LINC00535-202ENST00000517785 PPP6R1Q9UPN7 881 aa15.4■□□□□ 0.06
LINC00535-202ENST00000517785 MSH5O43196 834 aa15.39■□□□□ 0.05
LINC00535-202ENST00000517785 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
LINC00535-202ENST00000517785 ADRA2BP18089 450 aa15.34■□□□□ 0.05
LINC00535-202ENST00000517785 POTEDQ86YR6 584 aa15.06■□□□□ 0
LINC00535-202ENST00000517785 NISCHQ9Y2I1 1504 aa14.64□□□□□ -0.07
LINC00535-202ENST00000517785 MAPK8IP2Q13387 824 aaPredicted RBP14.09□□□□□ -0.15
LINC00535-202ENST00000517785 DMRT2Q9Y5R5 561 aa14.01□□□□□ -0.17
LINC00535-202ENST00000517785 SCAF1Q9H7N4 1312 aaKnown RBP14□□□□□ -0.17
LINC00535-202ENST00000517785 ABCC9O60706 1549 aa13.84□□□□□ -0.19
LINC00535-202ENST00000517785 PPP4R3CPQ6ZMV5 832 aa13.76□□□□□ -0.21
LINC00535-202ENST00000517785 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
LINC00535-202ENST00000517785 HOXD11P31277 338 aaPredicted RBP13.48□□□□□ -0.25
LINC00535-202ENST00000517785 DCAF8L1A6NGE4 600 aa13.4□□□□□ -0.26
LINC00535-202ENST00000517785 RNF216Q9NWF9 866 aaPredicted RBP13.37□□□□□ -0.27
LINC00535-202ENST00000517785 DNAJC5BQ9UF47 199 aa13.36□□□□□ -0.27
LINC00535-202ENST00000517785 CCDC180Q9P1Z9 1646 aa13.31□□□□□ -0.28
LINC00535-202ENST00000517785 CACNB1Q02641 598 aaPredicted RBP13.21□□□□□ -0.29
LINC00535-202ENST00000517785 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
LINC00535-202ENST00000517785 RNF39Q9H2S5 420 aa13.14□□□□□ -0.31
LINC00535-202ENST00000517785 NPM3O75607 178 aaKnown RBP13.04□□□□□ -0.32
LINC00535-202ENST00000517785 C1QBPQ07021 282 aaKnown RBP12.95□□□□□ -0.34
LINC00535-202ENST00000517785 RB1CC1Q8TDY2 1594 aa12.9□□□□□ -0.35
LINC00535-202ENST00000517785 PABPN1Q86U42 306 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00535-202ENST00000517785 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC00535-202ENST00000517785 KCNA4P22459 653 aa12.78□□□□□ -0.36
LINC00535-202ENST00000517785 UNC13AQ9UPW8 1703 aa12.68□□□□□ -0.38
LINC00535-202ENST00000517785 NACADO15069 1562 aa12.67□□□□□ -0.38
LINC00535-202ENST00000517785 DCAF8L2P0C7V8 631 aa12.65□□□□□ -0.38
LINC00535-202ENST00000517785 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
LINC00535-202ENST00000517785 BICRAQ9NZM4 1560 aa12.56□□□□□ -0.4
LINC00535-202ENST00000517785 DNAJC5Q9H3Z4 198 aa12.51□□□□□ -0.41
LINC00535-202ENST00000517785 CECR2Q9BXF3 1484 aa12.47□□□□□ -0.41
LINC00535-202ENST00000517785 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
LINC00535-202ENST00000517785 CC2D2AQ9P2K1 1620 aa12.44□□□□□ -0.42
LINC00535-202ENST00000517785 SPINK5Q9NQ38 1064 aaPredicted RBP12.4□□□□□ -0.42
LINC00535-202ENST00000517785 CAPN15O75808 1086 aa12.36□□□□□ -0.43
LINC00535-202ENST00000517785 DSG3P32926 999 aa12.31□□□□□ -0.44
LINC00535-202ENST00000517785 EIF4G1Q04637 1599 aaKnown RBP12.29□□□□□ -0.44
LINC00535-202ENST00000517785 MYO15BQ96JP2 1530 aa12.28□□□□□ -0.44
LINC00535-202ENST00000517785 SHROOM4Q9ULL8 1493 aa12.23□□□□□ -0.45
LINC00535-202ENST00000517785 SCRIBQ14160 1630 aa12.21□□□□□ -0.46
LINC00535-202ENST00000517785 APLP2Q06481 763 aa12.2□□□□□ -0.46
LINC00535-202ENST00000517785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.18□□□□□ -0.46
LINC00535-202ENST00000517785 HNRNPUL2Q1KMD3 747 aaKnown RBP12.18□□□□□ -0.46
LINC00535-202ENST00000517785 TRHP20396 242 aaPredicted RBP12.16□□□□□ -0.46
LINC00535-202ENST00000517785 ZNF219Q9P2Y4 722 aaPredicted RBP12.13□□□□□ -0.47
LINC00535-202ENST00000517785 SAMD1Q6SPF0 538 aaPredicted RBP12.12□□□□□ -0.47
LINC00535-202ENST00000517785 ABCB7O75027 752 aa12.09□□□□□ -0.47
LINC00535-202ENST00000517785 MYCNP04198 464 aaPredicted RBP12.05□□□□□ -0.48
LINC00535-202ENST00000517785 ZCCHC6Q5VYS8 1495 aaKnown RBP12.04□□□□□ -0.48
LINC00535-202ENST00000517785 SLC4A1APQ9BWU0 796 aaKnown RBP12.04□□□□□ -0.48
LINC00535-202ENST00000517785 CUX2O14529 1486 aa12.01□□□□□ -0.49
LINC00535-202ENST00000517785 DCAF1Q9Y4B6 1507 aa11.99□□□□□ -0.49
LINC00535-202ENST00000517785 ERCC6Q03468 1493 aa11.95□□□□□ -0.5
LINC00535-202ENST00000517785 FOXD4L1Q9NU39 408 aa11.92□□□□□ -0.5
LINC00535-202ENST00000517785 TRIM41Q8WV44 630 aa11.91□□□□□ -0.5
LINC00535-202ENST00000517785 POLA2Q14181 598 aa11.84□□□□□ -0.51
LINC00535-202ENST00000517785 POTEHQ6S545 545 aa11.79□□□□□ -0.52
LINC00535-202ENST00000517785 ATF5Q9Y2D1 282 aaPredicted RBP11.79□□□□□ -0.52
LINC00535-202ENST00000517785 NESP48681 1621 aa11.77□□□□□ -0.53
LINC00535-202ENST00000517785 ZBTB22O15209 634 aa11.76□□□□□ -0.53
LINC00535-202ENST00000517785 RBM42Q9BTD8 480 aaKnown RBP11.72□□□□□ -0.53
LINC00535-202ENST00000517785 THOC2Q8NI27 1593 aaKnown RBP11.7□□□□□ -0.54
LINC00535-202ENST00000517785 NCAPD3P42695 1498 aa11.7□□□□□ -0.54
LINC00535-202ENST00000517785 SMARCA2P51531 1590 aa11.67□□□□□ -0.54
LINC00535-202ENST00000517785 ATAD2BQ9ULI0 1458 aa11.64□□□□□ -0.55
LINC00535-202ENST00000517785 KIF21AQ7Z4S6 1674 aa11.6□□□□□ -0.55
LINC00535-202ENST00000517785 HMGXB3Q12766 1538 aa11.59□□□□□ -0.55
LINC00535-202ENST00000517785 ZBTB12Q9Y330 459 aaPredicted RBP11.58□□□□□ -0.56
LINC00535-202ENST00000517785 ATXN8OSP0DMR3 200 aa11.55□□□□□ -0.56
LINC00535-202ENST00000517785 SMARCA4P51532 1647 aa11.54□□□□□ -0.56
LINC00535-202ENST00000517785 BAZ1BQ9UIG0 1483 aaKnown RBP11.52□□□□□ -0.56
LINC00535-202ENST00000517785 LAMC3Q9Y6N6 1575 aa11.52□□□□□ -0.57
LINC00535-202ENST00000517785 BAZ1AQ9NRL2 1556 aaPredicted RBP11.49□□□□□ -0.57
LINC00535-202ENST00000517785 CHRDL2Q6WN34 429 aa11.48□□□□□ -0.57
LINC00535-202ENST00000517785 PDS5BQ9NTI5 1447 aa11.47□□□□□ -0.57
LINC00535-202ENST00000517785 OSCARQ8IYS5 282 aa11.47□□□□□ -0.57
LINC00535-202ENST00000517785 AKT1S1Q96B36 256 aa11.47□□□□□ -0.57
LINC00535-202ENST00000517785 MRC2Q9UBG0 1479 aa11.44□□□□□ -0.58
LINC00535-202ENST00000517785 WDR62O43379 1518 aa11.4□□□□□ -0.58
LINC00535-202ENST00000517785 RIMBP3CA6NJZ7 1639 aa11.37□□□□□ -0.59
LINC00535-202ENST00000517785 RIMBP3BA6NNM3 1639 aa11.37□□□□□ -0.59
LINC00535-202ENST00000517785 RIMBP3Q9UFD9 1639 aa11.37□□□□□ -0.59
LINC00535-202ENST00000517785 PEG3Q9GZU2 1588 aa11.37□□□□□ -0.59
LINC00535-202ENST00000517785 REM2Q8IYK8 340 aaPredicted RBP11.36□□□□□ -0.59
LINC00535-202ENST00000517785 CADPSQ9ULU8 1353 aa11.34□□□□□ -0.59
LINC00535-202ENST00000517785 MROH2BQ7Z745 1585 aa11.32□□□□□ -0.6
LINC00535-202ENST00000517785 FBLN2P98095 1184 aa11.3□□□□□ -0.6
LINC00535-202ENST00000517785 CEP164Q9UPV0 1460 aa11.3□□□□□ -0.6
LINC00535-202ENST00000517785 ARHGEF11O15085 1522 aa11.27□□□□□ -0.61
LINC00535-202ENST00000517785 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
LINC00535-202ENST00000517785 MKRN4PQ13434 485 aaPredicted RBP11.25□□□□□ -0.61
LINC00535-202ENST00000517785 SPDYE2BA6NHP3 402 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms