RNA–Protein interactions for RNA: ENST00000517529.1

SMG1P4-203, Transcript of SMG1 pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene SMG1P4, Length 1,589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-203ENST00000517529 RIMBP3BA6NNM3 1639 aa11.69□□□□□ -0.54
SMG1P4-203ENST00000517529 RIMBP3Q9UFD9 1639 aa11.69□□□□□ -0.54
SMG1P4-203ENST00000517529 RBM42Q9BTD8 480 aaKnown RBP11.67□□□□□ -0.54
SMG1P4-203ENST00000517529 ZNF608Q9ULD9 1512 aaPredicted RBP11.66□□□□□ -0.54
SMG1P4-203ENST00000517529 ARHGEF11O15085 1522 aa11.62□□□□□ -0.55
SMG1P4-203ENST00000517529 IFT140Q96RY7 1462 aa11.62□□□□□ -0.55
SMG1P4-203ENST00000517529 CCDC88BA6NC98 1476 aa11.6□□□□□ -0.55
SMG1P4-203ENST00000517529 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
SMG1P4-203ENST00000517529 TOPBP1Q92547 1522 aa11.59□□□□□ -0.55
SMG1P4-203ENST00000517529 EIF4G3O43432 1585 aaKnown RBP11.59□□□□□ -0.55
SMG1P4-203ENST00000517529 EHMT2Q96KQ7 1210 aa11.57□□□□□ -0.56
SMG1P4-203ENST00000517529 CHD1O14646 1710 aa11.55□□□□□ -0.56
SMG1P4-203ENST00000517529 TARBP1Q13395 1621 aaKnown RBP11.53□□□□□ -0.56
SMG1P4-203ENST00000517529 DNMBPQ6XZF7 1577 aa11.53□□□□□ -0.56
SMG1P4-203ENST00000517529 AQRO60306 1485 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMG1P4-203ENST00000517529 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
SMG1P4-203ENST00000517529 ARAP1Q96P48 1450 aa11.5□□□□□ -0.57
SMG1P4-203ENST00000517529 CYB5RLQ6IPT4 315 aa11.5□□□□□ -0.57
SMG1P4-203ENST00000517529 FBLN2P98095 1184 aa11.47□□□□□ -0.57
SMG1P4-203ENST00000517529 POLA1P09884 1462 aaPredicted RBP11.47□□□□□ -0.57
SMG1P4-203ENST00000517529 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
SMG1P4-203ENST00000517529 AKT1S1Q96B36 256 aa11.41□□□□□ -0.58
SMG1P4-203ENST00000517529 CLASP1Q7Z460 1538 aa11.4□□□□□ -0.58
SMG1P4-203ENST00000517529 TDRD9Q8NDG6 1382 aaKnown RBP11.4□□□□□ -0.58
SMG1P4-203ENST00000517529 SNAPC4Q5SXM2 1469 aa11.39□□□□□ -0.59
SMG1P4-203ENST00000517529 SOGA1O94964 1423 aa11.38□□□□□ -0.59
SMG1P4-203ENST00000517529 FGD5Q6ZNL6 1462 aa11.37□□□□□ -0.59
SMG1P4-203ENST00000517529 SP7Q8TDD2 431 aaPredicted RBP11.37□□□□□ -0.59
SMG1P4-203ENST00000517529 WDR97A6NE52 1622 aa11.36□□□□□ -0.59
SMG1P4-203ENST00000517529 CUX1P39880 1505 aa11.35□□□□□ -0.59
SMG1P4-203ENST00000517529 SYNJ1O43426 1573 aa11.34□□□□□ -0.59
SMG1P4-203ENST00000517529 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
SMG1P4-203ENST00000517529 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
SMG1P4-203ENST00000517529 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
SMG1P4-203ENST00000517529 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
SMG1P4-203ENST00000517529 MKRN4PQ13434 485 aaPredicted RBP11.31□□□□□ -0.6
SMG1P4-203ENST00000517529 GRIN2BQ13224 1484 aa11.31□□□□□ -0.6
SMG1P4-203ENST00000517529 PBRM1Q86U86 1689 aa11.31□□□□□ -0.6
SMG1P4-203ENST00000517529 SYNJ2O15056 1496 aa11.3□□□□□ -0.6
SMG1P4-203ENST00000517529 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
SMG1P4-203ENST00000517529 CHMP7Q8WUX9 453 aaPredicted RBP11.29□□□□□ -0.6
SMG1P4-203ENST00000517529 ZEB1P37275 1124 aaPredicted RBP11.28□□□□□ -0.6
SMG1P4-203ENST00000517529 ERICH6Q7L0X2 663 aa11.28□□□□□ -0.6
SMG1P4-203ENST00000517529 PPARGC1BQ86YN6 1023 aaKnown RBP11.28□□□□□ -0.6
SMG1P4-203ENST00000517529 REM2Q8IYK8 340 aaPredicted RBP11.27□□□□□ -0.61
SMG1P4-203ENST00000517529 GAPVD1Q14C86 1478 aa11.26□□□□□ -0.61
SMG1P4-203ENST00000517529 ABCA5Q8WWZ7 1642 aa11.26□□□□□ -0.61
SMG1P4-203ENST00000517529 ERCC6L2Q5T890 1561 aa11.24□□□□□ -0.61
SMG1P4-203ENST00000517529 ABCA10Q8WWZ4 1543 aa11.21□□□□□ -0.61
SMG1P4-203ENST00000517529 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
SMG1P4-203ENST00000517529 CEP170Q5SW79 1584 aa11.19□□□□□ -0.62
SMG1P4-203ENST00000517529 GRIN2AQ12879 1464 aa11.18□□□□□ -0.62
SMG1P4-203ENST00000517529 PCGF6Q9BYE7 350 aa11.18□□□□□ -0.62
SMG1P4-203ENST00000517529 ADAMTS12P58397 1594 aa11.17□□□□□ -0.62
SMG1P4-203ENST00000517529 CENPBP07199 599 aaPredicted RBP11.17□□□□□ -0.62
SMG1P4-203ENST00000517529 ACIN1Q9UKV3 1341 aaKnown RBP11.17□□□□□ -0.62
SMG1P4-203ENST00000517529 PRKCSHP14314 528 aaPredicted RBP11.16□□□□□ -0.62
SMG1P4-203ENST00000517529 SSUH2Q9Y2M2 353 aa11.16□□□□□ -0.62
SMG1P4-203ENST00000517529 NUP160Q12769 1436 aa11.15□□□□□ -0.62
SMG1P4-203ENST00000517529 SHROOM2Q13796 1616 aa11.15□□□□□ -0.62
SMG1P4-203ENST00000517529 BCL11AQ9H165 835 aa11.15□□□□□ -0.62
SMG1P4-203ENST00000517529 PITPNM1O00562 1244 aa11.14□□□□□ -0.63
SMG1P4-203ENST00000517529 KIF13AQ9H1H9 1805 aa11.13□□□□□ -0.63
SMG1P4-203ENST00000517529 BIVM-ERCC5R4GMW8 1640 aa11.12□□□□□ -0.63
SMG1P4-203ENST00000517529 TOP2BQ02880 1626 aa11.1□□□□□ -0.63
SMG1P4-203ENST00000517529 WRNQ14191 1432 aaPredicted RBP eCLIP11.1□□□□□ -0.63
SMG1P4-203ENST00000517529 FHAD1B1AJZ9 1412 aa11.09□□□□□ -0.63
SMG1P4-203ENST00000517529 SPDYE1Q8NFV5 336 aaPredicted RBP11.08□□□□□ -0.64
SMG1P4-203ENST00000517529 ERICH3Q5RHP9 1530 aa11.07□□□□□ -0.64
SMG1P4-203ENST00000517529 PIP4P2Q8N4L2 257 aa11.04□□□□□ -0.64
SMG1P4-203ENST00000517529 PRG4Q92954 1404 aaPredicted RBP11.04□□□□□ -0.64
SMG1P4-203ENST00000517529 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
SMG1P4-203ENST00000517529 RUSC2Q8N2Y8 1516 aa11.03□□□□□ -0.64
SMG1P4-203ENST00000517529 FXR2P51116 673 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMG1P4-203ENST00000517529 CLEC11AQ9Y240 323 aa11.01□□□□□ -0.65
SMG1P4-203ENST00000517529 ADCY10Q96PN6 1610 aa10.99□□□□□ -0.65
SMG1P4-203ENST00000517529 JPH4Q96JJ6 628 aa10.99□□□□□ -0.65
SMG1P4-203ENST00000517529 ABCC10Q5T3U5 1492 aa10.99□□□□□ -0.65
SMG1P4-203ENST00000517529 DIP2BQ9P265 1576 aa10.99□□□□□ -0.65
SMG1P4-203ENST00000517529 MAPKBP1O60336 1514 aa10.98□□□□□ -0.65
SMG1P4-203ENST00000517529 TRIM26Q12899 539 aaPredicted RBP10.97□□□□□ -0.65
SMG1P4-203ENST00000517529 FAM69CQ0P6D2 419 aa10.96□□□□□ -0.65
SMG1P4-203ENST00000517529 FAM9AQ8IZU1 332 aaPredicted RBP10.95□□□□□ -0.66
SMG1P4-203ENST00000517529 GTF3C3Q9Y5Q9 886 aa10.95□□□□□ -0.66
SMG1P4-203ENST00000517529 NEUROD1Q13562 356 aa10.94□□□□□ -0.66
SMG1P4-203ENST00000517529 TSPOAP1O95153 1857 aa10.93□□□□□ -0.66
SMG1P4-203ENST00000517529 KDM6BO15054 1643 aa10.92□□□□□ -0.66
SMG1P4-203ENST00000517529 SPDYE4A6NLX3 237 aa10.92□□□□□ -0.66
SMG1P4-203ENST00000517529 KDM4FA0A1W2PPD8 638 aa10.9□□□□□ -0.66
SMG1P4-203ENST00000517529 KIAA0586Q9BVV6 1533 aa10.9□□□□□ -0.66
SMG1P4-203ENST00000517529 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.67
SMG1P4-203ENST00000517529 ANP32EQ9BTT0 268 aa10.9□□□□□ -0.67
SMG1P4-203ENST00000517529 PRR29P0C7W0 189 aa10.88□□□□□ -0.67
SMG1P4-203ENST00000517529 PLSCR2Q9NRY7 297 aa10.88□□□□□ -0.67
SMG1P4-203ENST00000517529 IGF1RP08069 1367 aa10.88□□□□□ -0.67
SMG1P4-203ENST00000517529 CUL7Q14999 1698 aa10.88□□□□□ -0.67
SMG1P4-203ENST00000517529 PRKAR2AP13861 404 aaKnown RBP10.86□□□□□ -0.67
SMG1P4-203ENST00000517529 PPRC1Q5VV67 1664 aaKnown RBP10.86□□□□□ -0.67
SMG1P4-203ENST00000517529 HAX1O00165 279 aa10.86□□□□□ -0.67
SMG1P4-203ENST00000517529 KIF27Q86VH2 1401 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms