RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 DHX57Q6P158 1386 aaKnown RBP14.92□□□□□ -0.02
PCDHGA1-202ENST00000517417 CHIC2Q9UKJ5 165 aa14.92□□□□□ -0.02
PCDHGA1-202ENST00000517417 CCNB3Q8WWL7 1395 aa14.92□□□□□ -0.02
PCDHGA1-202ENST00000517417 TSHZ2Q9NRE2 1034 aa14.91□□□□□ -0.02
PCDHGA1-202ENST00000517417 TONSLQ96HA7 1378 aa14.91□□□□□ -0.02
PCDHGA1-202ENST00000517417 HNRNPUQ00839 825 aaKnown RBP eCLIP14.89□□□□□ -0.03
PCDHGA1-202ENST00000517417 SIN3AQ96ST3 1273 aa14.88□□□□□ -0.03
PCDHGA1-202ENST00000517417 KIF27Q86VH2 1401 aa14.86□□□□□ -0.03
PCDHGA1-202ENST00000517417 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
PCDHGA1-202ENST00000517417 RTL5Q5HYW3 569 aaPredicted RBP14.86□□□□□ -0.03
PCDHGA1-202ENST00000517417 BCL11AQ9H165 835 aa14.85□□□□□ -0.03
PCDHGA1-202ENST00000517417 CHMP7Q8WUX9 453 aaPredicted RBP14.84□□□□□ -0.03
PCDHGA1-202ENST00000517417 IRX6P78412 446 aaPredicted RBP14.83□□□□□ -0.04
PCDHGA1-202ENST00000517417 CFTRP13569 1480 aa14.82□□□□□ -0.04
PCDHGA1-202ENST00000517417 KCNH8Q96L42 1107 aa14.82□□□□□ -0.04
PCDHGA1-202ENST00000517417 CADPSQ9ULU8 1353 aa14.82□□□□□ -0.04
PCDHGA1-202ENST00000517417 RAB3GAP2Q9H2M9 1393 aa14.8□□□□□ -0.04
PCDHGA1-202ENST00000517417 DNAJC5BQ9UF47 199 aa14.79□□□□□ -0.04
PCDHGA1-202ENST00000517417 TOP2BQ02880 1626 aa14.79□□□□□ -0.04
PCDHGA1-202ENST00000517417 CUX1P39880 1505 aa14.78□□□□□ -0.04
PCDHGA1-202ENST00000517417 KIF21BO75037 1637 aa14.78□□□□□ -0.04
PCDHGA1-202ENST00000517417 NPM1P06748 294 aaKnown RBP eCLIP14.78□□□□□ -0.04
PCDHGA1-202ENST00000517417 CHGAP10645 457 aaKnown RBP14.77□□□□□ -0.04
PCDHGA1-202ENST00000517417 SETD5Q9C0A6 1442 aa14.76□□□□□ -0.05
PCDHGA1-202ENST00000517417 FAM9BQ8IZU0 186 aa14.76□□□□□ -0.05
PCDHGA1-202ENST00000517417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.76□□□□□ -0.05
PCDHGA1-202ENST00000517417 SLC24A1O60721 1099 aa14.75□□□□□ -0.05
PCDHGA1-202ENST00000517417 RBM19Q9Y4C8 960 aaKnown RBP14.75□□□□□ -0.05
PCDHGA1-202ENST00000517417 CANXP27824 592 aaKnown RBP14.74□□□□□ -0.05
PCDHGA1-202ENST00000517417 SALL2Q9Y467 1007 aaPredicted RBP14.74□□□□□ -0.05
PCDHGA1-202ENST00000517417 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
PCDHGA1-202ENST00000517417 CCER2I3L3R5 266 aa14.71□□□□□ -0.05
PCDHGA1-202ENST00000517417 NESP48681 1621 aa14.7□□□□□ -0.06
PCDHGA1-202ENST00000517417 KDM2AQ9Y2K7 1162 aa14.7□□□□□ -0.06
PCDHGA1-202ENST00000517417 RRP7BPQ9NSQ0 103 aa14.69□□□□□ -0.06
PCDHGA1-202ENST00000517417 BIVM-ERCC5R4GMW8 1640 aa14.68□□□□□ -0.06
PCDHGA1-202ENST00000517417 TIMELESSQ9UNS1 1208 aa14.68□□□□□ -0.06
PCDHGA1-202ENST00000517417 TSPY4P0CV99 314 aa14.67□□□□□ -0.06
PCDHGA1-202ENST00000517417 TSPY10P0CW01 314 aa14.67□□□□□ -0.06
PCDHGA1-202ENST00000517417 PLPPR3Q6T4P5 718 aa14.66□□□□□ -0.06
PCDHGA1-202ENST00000517417 ZBTB47Q9UFB7 747 aaPredicted RBP14.66□□□□□ -0.06
PCDHGA1-202ENST00000517417 CUX2O14529 1486 aa14.66□□□□□ -0.06
PCDHGA1-202ENST00000517417 NEFMP07197 916 aa14.65□□□□□ -0.06
PCDHGA1-202ENST00000517417 MRS2Q9HD23 443 aa14.65□□□□□ -0.06
PCDHGA1-202ENST00000517417 FANCD2Q9BXW9 1451 aa14.65□□□□□ -0.06
PCDHGA1-202ENST00000517417 FHAD1B1AJZ9 1412 aa14.63□□□□□ -0.07
PCDHGA1-202ENST00000517417 CARMIL1Q5VZK9 1371 aa14.63□□□□□ -0.07
PCDHGA1-202ENST00000517417 EIF4G2P78344 907 aaKnown RBP eCLIP14.63□□□□□ -0.07
PCDHGA1-202ENST00000517417 PPP1R15AO75807 674 aaPredicted RBP14.62□□□□□ -0.07
PCDHGA1-202ENST00000517417 ANP32AP39687 249 aaKnown RBP14.62□□□□□ -0.07
PCDHGA1-202ENST00000517417 NPM2Q86SE8 214 aaKnown RBP14.62□□□□□ -0.07
PCDHGA1-202ENST00000517417 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
PCDHGA1-202ENST00000517417 ESF1Q9H501 851 aaKnown RBP14.62□□□□□ -0.07
PCDHGA1-202ENST00000517417 FGD5Q6ZNL6 1462 aa14.61□□□□□ -0.07
PCDHGA1-202ENST00000517417 TMC1Q8TDI8 760 aa14.61□□□□□ -0.07
PCDHGA1-202ENST00000517417 ARAP1Q96P48 1450 aa14.6□□□□□ -0.07
PCDHGA1-202ENST00000517417 RRBP1Q9P2E9 1410 aaKnown RBP14.6□□□□□ -0.07
PCDHGA1-202ENST00000517417 PRXQ9BXM0 1461 aa14.6□□□□□ -0.07
PCDHGA1-202ENST00000517417 NBR1Q14596 966 aa14.59□□□□□ -0.07
PCDHGA1-202ENST00000517417 SENP3Q9H4L4 574 aaPredicted RBP14.58□□□□□ -0.07
PCDHGA1-202ENST00000517417 ARHGAP35Q9NRY4 1499 aa14.58□□□□□ -0.08
PCDHGA1-202ENST00000517417 PPP4R2Q9NY27 417 aa14.57□□□□□ -0.08
PCDHGA1-202ENST00000517417 IGF1RP08069 1367 aa14.57□□□□□ -0.08
PCDHGA1-202ENST00000517417 RAD54L2Q9Y4B4 1467 aa14.56□□□□□ -0.08
PCDHGA1-202ENST00000517417 CCDC136Q96JN2 1154 aa14.56□□□□□ -0.08
PCDHGA1-202ENST00000517417 SENP3-EIF4A1A0A087X0R7 540 aa14.55□□□□□ -0.08
PCDHGA1-202ENST00000517417 ERICH3Q5RHP9 1530 aa14.55□□□□□ -0.08
PCDHGA1-202ENST00000517417 RGL3Q3MIN7 710 aa14.53□□□□□ -0.08
PCDHGA1-202ENST00000517417 B4GALNT3Q6L9W6 998 aa14.52□□□□□ -0.08
PCDHGA1-202ENST00000517417 PLEKHD1A6NEE1 506 aa14.51□□□□□ -0.09
PCDHGA1-202ENST00000517417 HSPA5P11021 654 aaKnown RBP14.51□□□□□ -0.09
PCDHGA1-202ENST00000517417 PRDM2Q13029 1718 aa14.5□□□□□ -0.09
PCDHGA1-202ENST00000517417 PHLDB1Q86UU1 1377 aa14.48□□□□□ -0.09
PCDHGA1-202ENST00000517417 TOPBP1Q92547 1522 aa14.48□□□□□ -0.09
PCDHGA1-202ENST00000517417 FHOD3Q2V2M9 1422 aa14.47□□□□□ -0.09
PCDHGA1-202ENST00000517417 TDRD9Q8NDG6 1382 aaKnown RBP14.47□□□□□ -0.09
PCDHGA1-202ENST00000517417 POLA1P09884 1462 aaPredicted RBP14.47□□□□□ -0.09
PCDHGA1-202ENST00000517417 CFDP1Q9UEE9 299 aaPredicted RBP14.46□□□□□ -0.09
PCDHGA1-202ENST00000517417 WDR43Q15061 677 aaKnown RBP eCLIP14.44□□□□□ -0.1
PCDHGA1-202ENST00000517417 LRRC9Q6ZRR7 1453 aa14.44□□□□□ -0.1
PCDHGA1-202ENST00000517417 DNMBPQ6XZF7 1577 aa14.43□□□□□ -0.1
PCDHGA1-202ENST00000517417 NOP58Q9Y2X3 529 aaKnown RBP14.43□□□□□ -0.1
PCDHGA1-202ENST00000517417 WDR97A6NE52 1622 aa14.43□□□□□ -0.1
PCDHGA1-202ENST00000517417 ERICH6BQ5W0A0 696 aa14.42□□□□□ -0.1
PCDHGA1-202ENST00000517417 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
PCDHGA1-202ENST00000517417 LAMC3Q9Y6N6 1575 aa14.4□□□□□ -0.1
PCDHGA1-202ENST00000517417 DEKP35659 375 aaKnown RBP14.39□□□□□ -0.11
PCDHGA1-202ENST00000517417 CCDC18Q5T9S5 1454 aa14.39□□□□□ -0.11
PCDHGA1-202ENST00000517417 FOXD1Q16676 465 aa14.38□□□□□ -0.11
PCDHGA1-202ENST00000517417 CARMIL2Q6F5E8 1435 aa14.38□□□□□ -0.11
PCDHGA1-202ENST00000517417 FMN1Q68DA7 1419 aa14.38□□□□□ -0.11
PCDHGA1-202ENST00000517417 FANCIQ9NVI1 1328 aa14.37□□□□□ -0.11
PCDHGA1-202ENST00000517417 MRC2Q9UBG0 1479 aa14.37□□□□□ -0.11
PCDHGA1-202ENST00000517417 ABCA10Q8WWZ4 1543 aa14.36□□□□□ -0.11
PCDHGA1-202ENST00000517417 TIAM1Q13009 1591 aa14.36□□□□□ -0.11
PCDHGA1-202ENST00000517417 PLEKHG5O94827 1062 aa14.34□□□□□ -0.11
PCDHGA1-202ENST00000517417 CARD11Q9BXL7 1154 aa14.33□□□□□ -0.12
PCDHGA1-202ENST00000517417 HSP90AA1P07900 732 aaKnown RBP14.33□□□□□ -0.12
PCDHGA1-202ENST00000517417 MPHOSPH9Q99550 1183 aa14.33□□□□□ -0.12
PCDHGA1-202ENST00000517417 L3MBTL2Q969R5 705 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms