RNA–Protein interactions for RNA: ENST00000517386.1

HMBOX1-204, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-204ENST00000517386 SYNJ1O43426 1573 aa14.15□□□□□ -0.14
HMBOX1-204ENST00000517386 GAPVD1Q14C86 1478 aa14.15□□□□□ -0.14
HMBOX1-204ENST00000517386 SYNJ2O15056 1496 aa14.14□□□□□ -0.15
HMBOX1-204ENST00000517386 WDR97A6NE52 1622 aa14.12□□□□□ -0.15
HMBOX1-204ENST00000517386 PBRM1Q86U86 1689 aa14.11□□□□□ -0.15
HMBOX1-204ENST00000517386 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
HMBOX1-204ENST00000517386 ABCA10Q8WWZ4 1543 aa14.08□□□□□ -0.16
HMBOX1-204ENST00000517386 ABCA5Q8WWZ7 1642 aa14.06□□□□□ -0.16
HMBOX1-204ENST00000517386 ERCC6L2Q5T890 1561 aa14.05□□□□□ -0.16
HMBOX1-204ENST00000517386 WRNQ14191 1432 aaPredicted RBP eCLIP14.04□□□□□ -0.16
HMBOX1-204ENST00000517386 GRIN2AQ12879 1464 aa14.01□□□□□ -0.17
HMBOX1-204ENST00000517386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.99□□□□□ -0.17
HMBOX1-204ENST00000517386 ADAMTS12P58397 1594 aa13.99□□□□□ -0.17
HMBOX1-204ENST00000517386 CEP170Q5SW79 1584 aa13.99□□□□□ -0.17
HMBOX1-204ENST00000517386 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
HMBOX1-204ENST00000517386 BIVM-ERCC5R4GMW8 1640 aa13.95□□□□□ -0.18
HMBOX1-204ENST00000517386 FHAD1B1AJZ9 1412 aa13.95□□□□□ -0.18
HMBOX1-204ENST00000517386 NUP160Q12769 1436 aa13.95□□□□□ -0.18
HMBOX1-204ENST00000517386 PRG4Q92954 1404 aaPredicted RBP13.89□□□□□ -0.19
HMBOX1-204ENST00000517386 DSG3P32926 999 aa13.88□□□□□ -0.19
HMBOX1-204ENST00000517386 JPH4Q96JJ6 628 aa13.88□□□□□ -0.19
HMBOX1-204ENST00000517386 ERICH3Q5RHP9 1530 aa13.88□□□□□ -0.19
HMBOX1-204ENST00000517386 SHROOM2Q13796 1616 aa13.86□□□□□ -0.19
HMBOX1-204ENST00000517386 TTBK1Q5TCY1 1321 aaPredicted RBP13.83□□□□□ -0.2
HMBOX1-204ENST00000517386 FAM69CQ0P6D2 419 aa13.78□□□□□ -0.2
HMBOX1-204ENST00000517386 RUSC2Q8N2Y8 1516 aa13.78□□□□□ -0.2
HMBOX1-204ENST00000517386 NPM1P06748 294 aaKnown RBP eCLIP13.77□□□□□ -0.21
HMBOX1-204ENST00000517386 IGF1RP08069 1367 aa13.77□□□□□ -0.21
HMBOX1-204ENST00000517386 KIF13AQ9H1H9 1805 aa13.76□□□□□ -0.21
HMBOX1-204ENST00000517386 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
HMBOX1-204ENST00000517386 CAPN15O75808 1086 aa13.73□□□□□ -0.21
HMBOX1-204ENST00000517386 KIF27Q86VH2 1401 aa13.73□□□□□ -0.21
HMBOX1-204ENST00000517386 ADCY10Q96PN6 1610 aa13.71□□□□□ -0.22
HMBOX1-204ENST00000517386 KIAA0586Q9BVV6 1533 aa13.7□□□□□ -0.22
HMBOX1-204ENST00000517386 ABCC10Q5T3U5 1492 aa13.69□□□□□ -0.22
HMBOX1-204ENST00000517386 CARMIL1Q5VZK9 1371 aa13.68□□□□□ -0.22
HMBOX1-204ENST00000517386 PTPRGP23470 1445 aa13.65□□□□□ -0.22
HMBOX1-204ENST00000517386 DIP2BQ9P265 1576 aa13.65□□□□□ -0.22
HMBOX1-204ENST00000517386 CUL7Q14999 1698 aa13.65□□□□□ -0.22
HMBOX1-204ENST00000517386 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
HMBOX1-204ENST00000517386 TSPOAP1O95153 1857 aa13.64□□□□□ -0.23
HMBOX1-204ENST00000517386 TNIKQ9UKE5 1360 aa13.59□□□□□ -0.23
HMBOX1-204ENST00000517386 CARMIL2Q6F5E8 1435 aa13.58□□□□□ -0.24
HMBOX1-204ENST00000517386 KDM6BO15054 1643 aa13.58□□□□□ -0.24
HMBOX1-204ENST00000517386 U3KPZ7 1027 aaPredicted RBP13.57□□□□□ -0.24
HMBOX1-204ENST00000517386 KDM4FA0A1W2PPD8 638 aa13.56□□□□□ -0.24
HMBOX1-204ENST00000517386 IQGAP2Q13576 1575 aa13.56□□□□□ -0.24
HMBOX1-204ENST00000517386 ASXL2Q76L83 1435 aa13.56□□□□□ -0.24
HMBOX1-204ENST00000517386 ABCC2Q92887 1545 aa13.54□□□□□ -0.24
HMBOX1-204ENST00000517386 DISP1Q96F81 1524 aa13.54□□□□□ -0.24
HMBOX1-204ENST00000517386 UACAQ9BZF9 1416 aa13.52□□□□□ -0.25
HMBOX1-204ENST00000517386 RAPGEF2Q9Y4G8 1499 aa13.51□□□□□ -0.25
HMBOX1-204ENST00000517386 PLB1Q6P1J6 1458 aa13.49□□□□□ -0.25
HMBOX1-204ENST00000517386 UHRF1BP1LA0JNW5 1464 aa13.47□□□□□ -0.25
HMBOX1-204ENST00000517386 ARID3CA6NKF2 412 aa13.46□□□□□ -0.25
HMBOX1-204ENST00000517386 PPRC1Q5VV67 1664 aaKnown RBP13.46□□□□□ -0.26
HMBOX1-204ENST00000517386 UGGT2Q9NYU1 1516 aa13.45□□□□□ -0.26
HMBOX1-204ENST00000517386 COL17A1Q9UMD9 1497 aaPredicted RBP13.45□□□□□ -0.26
HMBOX1-204ENST00000517386 EPRSP07814 1512 aaKnown RBP13.44□□□□□ -0.26
HMBOX1-204ENST00000517386 KIAA0556O60303 1618 aa13.44□□□□□ -0.26
HMBOX1-204ENST00000517386 KCNH8Q96L42 1107 aa13.44□□□□□ -0.26
HMBOX1-204ENST00000517386 ZCCHC11Q5TAX3 1644 aaKnown RBP13.43□□□□□ -0.26
HMBOX1-204ENST00000517386 GLI2P10070 1586 aa13.43□□□□□ -0.26
HMBOX1-204ENST00000517386 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
HMBOX1-204ENST00000517386 KDM5BQ9UGL1 1544 aa13.43□□□□□ -0.26
HMBOX1-204ENST00000517386 P3H3Q8IVL6 736 aa13.42□□□□□ -0.26
HMBOX1-204ENST00000517386 ADGRL1O94910 1474 aa13.4□□□□□ -0.26
HMBOX1-204ENST00000517386 CHRDL2Q6WN34 429 aa13.38□□□□□ -0.27
HMBOX1-204ENST00000517386 MAP3K4Q9Y6R4 1608 aa13.38□□□□□ -0.27
HMBOX1-204ENST00000517386 WDR7Q9Y4E6 1490 aa13.37□□□□□ -0.27
HMBOX1-204ENST00000517386 RANGAP1P46060 587 aaPredicted RBP13.37□□□□□ -0.27
HMBOX1-204ENST00000517386 ABCB7O75027 752 aa13.36□□□□□ -0.27
HMBOX1-204ENST00000517386 CTTNBP2Q8WZ74 1663 aa13.36□□□□□ -0.27
HMBOX1-204ENST00000517386 TEX14Q8IWB6 1497 aa13.35□□□□□ -0.27
HMBOX1-204ENST00000517386 GOLGA3Q08378 1498 aa13.34□□□□□ -0.27
HMBOX1-204ENST00000517386 CD109Q6YHK3 1445 aa13.33□□□□□ -0.28
HMBOX1-204ENST00000517386 PRXQ9BXM0 1461 aa13.33□□□□□ -0.28
HMBOX1-204ENST00000517386 ABCA8O94911 1581 aa13.32□□□□□ -0.28
HMBOX1-204ENST00000517386 FAM9AQ8IZU1 332 aaPredicted RBP13.3□□□□□ -0.28
HMBOX1-204ENST00000517386 ILDR1Q86SU0 546 aaPredicted RBP13.29□□□□□ -0.28
HMBOX1-204ENST00000517386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
HMBOX1-204ENST00000517386 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
HMBOX1-204ENST00000517386 CSRNP3Q8WYN3 585 aa13.27□□□□□ -0.29
HMBOX1-204ENST00000517386 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
HMBOX1-204ENST00000517386 MAGI3Q5TCQ9 1506 aa13.26□□□□□ -0.29
HMBOX1-204ENST00000517386 ATP10BO94823 1461 aa13.25□□□□□ -0.29
HMBOX1-204ENST00000517386 CFAP43Q8NDM7 1665 aa13.24□□□□□ -0.29
HMBOX1-204ENST00000517386 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
HMBOX1-204ENST00000517386 HECW2Q9P2P5 1572 aa13.24□□□□□ -0.29
HMBOX1-204ENST00000517386 RAPGEF3O95398 923 aa13.23□□□□□ -0.29
HMBOX1-204ENST00000517386 KIF21BO75037 1637 aa13.21□□□□□ -0.29
HMBOX1-204ENST00000517386 FHOD3Q2V2M9 1422 aa13.2□□□□□ -0.3
HMBOX1-204ENST00000517386 SAMD9Q5K651 1589 aa13.17□□□□□ -0.3
HMBOX1-204ENST00000517386 RAPGEF6Q8TEU7 1601 aa13.17□□□□□ -0.3
HMBOX1-204ENST00000517386 ARID4BQ4LE39 1312 aaPredicted RBP13.16□□□□□ -0.3
HMBOX1-204ENST00000517386 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
HMBOX1-204ENST00000517386 ARAP3Q8WWN8 1544 aa13.15□□□□□ -0.3
HMBOX1-204ENST00000517386 NUP153P49790 1475 aaKnown RBP13.15□□□□□ -0.3
HMBOX1-204ENST00000517386 ABCA9Q8IUA7 1624 aa13.14□□□□□ -0.31
HMBOX1-204ENST00000517386 NPM3O75607 178 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms