RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 LRRC9Q6ZRR7 1453 aa24.34■■□□□ 1.49
TSPAN17-209ENST00000515708 NESP48681 1621 aa24.33■■□□□ 1.49
TSPAN17-209ENST00000515708 SETD5Q9C0A6 1442 aa24.29■■□□□ 1.48
TSPAN17-209ENST00000515708 PHLDB1Q86UU1 1377 aa24.28■■□□□ 1.48
TSPAN17-209ENST00000515708 FHAD1B1AJZ9 1412 aa24.28■■□□□ 1.48
TSPAN17-209ENST00000515708 FANCD2Q9BXW9 1451 aa24.27■■□□□ 1.48
TSPAN17-209ENST00000515708 CFAP43Q8NDM7 1665 aa24.26■■□□□ 1.47
TSPAN17-209ENST00000515708 PCF11O94913 1555 aaKnown RBP24.23■■□□□ 1.47
TSPAN17-209ENST00000515708 SUPT16HQ9Y5B9 1047 aaKnown RBP24.22■■□□□ 1.47
TSPAN17-209ENST00000515708 FAM50AQ14320 339 aaKnown RBP24.17■■□□□ 1.46
TSPAN17-209ENST00000515708 WDR97A6NE52 1622 aa24.14■■□□□ 1.45
TSPAN17-209ENST00000515708 P3H3Q8IVL6 736 aa24.14■■□□□ 1.45
TSPAN17-209ENST00000515708 FHOD3Q2V2M9 1422 aa24.11■■□□□ 1.45
TSPAN17-209ENST00000515708 FYCO1Q9BQS8 1478 aa24.11■■□□□ 1.45
TSPAN17-209ENST00000515708 SIN3AQ96ST3 1273 aa24.1■■□□□ 1.45
TSPAN17-209ENST00000515708 EFCAB5A4FU69 1503 aa24.1■■□□□ 1.45
TSPAN17-209ENST00000515708 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
TSPAN17-209ENST00000515708 LAMC3Q9Y6N6 1575 aa24.09■■□□□ 1.45
TSPAN17-209ENST00000515708 ABCA10Q8WWZ4 1543 aa24.09■■□□□ 1.45
TSPAN17-209ENST00000515708 KCNH8Q96L42 1107 aa24.08■■□□□ 1.44
TSPAN17-209ENST00000515708 ATP1B4Q9UN42 357 aaPredicted RBP24.07■■□□□ 1.44
TSPAN17-209ENST00000515708 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
TSPAN17-209ENST00000515708 CASKIN1Q8WXD9 1431 aa24.07■■□□□ 1.44
TSPAN17-209ENST00000515708 TIMELESSQ9UNS1 1208 aa24.06■■□□□ 1.44
TSPAN17-209ENST00000515708 AQRO60306 1485 aaKnown RBP eCLIP24.06■■□□□ 1.44
TSPAN17-209ENST00000515708 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.05■■□□□ 1.44
TSPAN17-209ENST00000515708 TOPBP1Q92547 1522 aa24.04■■□□□ 1.44
TSPAN17-209ENST00000515708 POLA1P09884 1462 aaPredicted RBP24.04■■□□□ 1.44
TSPAN17-209ENST00000515708 CUL7Q14999 1698 aa24.02■■□□□ 1.44
TSPAN17-209ENST00000515708 CTTNBP2Q8WZ74 1663 aa24.01■■□□□ 1.43
TSPAN17-209ENST00000515708 DDX10Q13206 875 aaKnown RBP24■■□□□ 1.43
TSPAN17-209ENST00000515708 URB2Q14146 1524 aaKnown RBP23.97■■□□□ 1.43
TSPAN17-209ENST00000515708 PPP1R15AO75807 674 aaPredicted RBP23.96■■□□□ 1.43
TSPAN17-209ENST00000515708 PDS5BQ9NTI5 1447 aa23.96■■□□□ 1.43
TSPAN17-209ENST00000515708 FMN1Q68DA7 1419 aa23.95■■□□□ 1.42
TSPAN17-209ENST00000515708 FGD6Q6ZV73 1430 aa23.95■■□□□ 1.42
TSPAN17-209ENST00000515708 SNAPC4Q5SXM2 1469 aa23.93■■□□□ 1.42
TSPAN17-209ENST00000515708 KIF21AQ7Z4S6 1674 aa23.88■■□□□ 1.41
TSPAN17-209ENST00000515708 CCDC18Q5T9S5 1454 aa23.87■■□□□ 1.41
TSPAN17-209ENST00000515708 TSHZ2Q9NRE2 1034 aa23.86■■□□□ 1.41
TSPAN17-209ENST00000515708 MTUS2Q5JR59 1369 aa23.85■■□□□ 1.41
TSPAN17-209ENST00000515708 HIRIP3Q9BW71 556 aaPredicted RBP23.85■■□□□ 1.41
TSPAN17-209ENST00000515708 HFM1A2PYH4 1435 aa23.85■■□□□ 1.41
TSPAN17-209ENST00000515708 PTPRKQ15262 1439 aa23.83■■□□□ 1.41
TSPAN17-209ENST00000515708 SAMD9Q5K651 1589 aa23.83■■□□□ 1.41
TSPAN17-209ENST00000515708 UACAQ9BZF9 1416 aa23.82■■□□□ 1.4
TSPAN17-209ENST00000515708 TONSLQ96HA7 1378 aa23.82■■□□□ 1.4
TSPAN17-209ENST00000515708 PTPN23Q9H3S7 1636 aa23.82■■□□□ 1.4
TSPAN17-209ENST00000515708 LRRIQ1Q96JM4 1722 aa23.82■■□□□ 1.4
TSPAN17-209ENST00000515708 CCER2I3L3R5 266 aa23.81■■□□□ 1.4
TSPAN17-209ENST00000515708 ABCA5Q8WWZ7 1642 aa23.78■■□□□ 1.4
TSPAN17-209ENST00000515708 NCOA2Q15596 1464 aa23.78■■□□□ 1.4
TSPAN17-209ENST00000515708 ANP32CO43423 234 aa23.77■■□□□ 1.4
TSPAN17-209ENST00000515708 GRIN2BQ13224 1484 aa23.77■■□□□ 1.4
TSPAN17-209ENST00000515708 MYOM3Q5VTT5 1437 aa23.77■■□□□ 1.4
TSPAN17-209ENST00000515708 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
TSPAN17-209ENST00000515708 THOC2Q8NI27 1593 aaKnown RBP23.75■■□□□ 1.39
TSPAN17-209ENST00000515708 NAIPQ13075 1403 aa23.75■■□□□ 1.39
TSPAN17-209ENST00000515708 FKBP8Q14318 412 aa23.74■■□□□ 1.39
TSPAN17-209ENST00000515708 SUPT6HQ7KZ85 1726 aaKnown RBP23.73■■□□□ 1.39
TSPAN17-209ENST00000515708 BCANQ96GW7 911 aa23.72■■□□□ 1.39
TSPAN17-209ENST00000515708 GAPVD1Q14C86 1478 aa23.72■■□□□ 1.39
TSPAN17-209ENST00000515708 EHBP1L1Q8N3D4 1523 aa23.72■■□□□ 1.39
TSPAN17-209ENST00000515708 TRIM52Q96A61 297 aa23.67■■□□□ 1.38
TSPAN17-209ENST00000515708 UGGT2Q9NYU1 1516 aa23.66■■□□□ 1.38
TSPAN17-209ENST00000515708 KDM5BQ9UGL1 1544 aa23.66■■□□□ 1.38
TSPAN17-209ENST00000515708 ARHGEF11O15085 1522 aa23.65■■□□□ 1.38
TSPAN17-209ENST00000515708 NEFLP07196 543 aa23.63■■□□□ 1.37
TSPAN17-209ENST00000515708 MRC2Q9UBG0 1479 aa23.62■■□□□ 1.37
TSPAN17-209ENST00000515708 MAGI3Q5TCQ9 1506 aa23.62■■□□□ 1.37
TSPAN17-209ENST00000515708 TARBP1Q13395 1621 aaKnown RBP23.61■■□□□ 1.37
TSPAN17-209ENST00000515708 TCOF1Q13428 1488 aaKnown RBP23.58■■□□□ 1.37
TSPAN17-209ENST00000515708 GCC2Q8IWJ2 1684 aa23.57■■□□□ 1.36
TSPAN17-209ENST00000515708 HECW1Q76N89 1606 aa23.55■■□□□ 1.36
TSPAN17-209ENST00000515708 RRP7BPQ9NSQ0 103 aa23.54■■□□□ 1.36
TSPAN17-209ENST00000515708 DENND4BO75064 1496 aaPredicted RBP23.54■■□□□ 1.36
TSPAN17-209ENST00000515708 AKNAQ7Z591 1439 aa23.52■■□□□ 1.36
TSPAN17-209ENST00000515708 CHIC2Q9UKJ5 165 aa23.5■■□□□ 1.35
TSPAN17-209ENST00000515708 ANP32EQ9BTT0 268 aa23.48■■□□□ 1.35
TSPAN17-209ENST00000515708 EPRSP07814 1512 aaKnown RBP23.48■■□□□ 1.35
TSPAN17-209ENST00000515708 KDM6BO15054 1643 aa23.47■■□□□ 1.35
TSPAN17-209ENST00000515708 WASHC2AQ641Q2 1341 aa23.47■■□□□ 1.35
TSPAN17-209ENST00000515708 ERCC6Q03468 1493 aa23.47■■□□□ 1.35
TSPAN17-209ENST00000515708 WDR62O43379 1518 aa23.47■■□□□ 1.35
TSPAN17-209ENST00000515708 HSPA5P11021 654 aaKnown RBP23.46■■□□□ 1.35
TSPAN17-209ENST00000515708 IQGAP2Q13576 1575 aa23.46■■□□□ 1.35
TSPAN17-209ENST00000515708 MIA2Q96PC5 1412 aa23.45■■□□□ 1.34
TSPAN17-209ENST00000515708 PBRM1Q86U86 1689 aa23.44■■□□□ 1.34
TSPAN17-209ENST00000515708 ZNF608Q9ULD9 1512 aaPredicted RBP23.44■■□□□ 1.34
TSPAN17-209ENST00000515708 BCL11AQ9H165 835 aa23.43■■□□□ 1.34
TSPAN17-209ENST00000515708 CDK13Q14004 1512 aaKnown RBP23.42■■□□□ 1.34
TSPAN17-209ENST00000515708 HNRNPUQ00839 825 aaKnown RBP eCLIP23.41■■□□□ 1.34
TSPAN17-209ENST00000515708 EIF4G2P78344 907 aaKnown RBP eCLIP23.4■■□□□ 1.34
TSPAN17-209ENST00000515708 MPHOSPH9Q99550 1183 aa23.4■■□□□ 1.34
TSPAN17-209ENST00000515708 ADAMTS12P58397 1594 aa23.39■■□□□ 1.33
TSPAN17-209ENST00000515708 RBM19Q9Y4C8 960 aaKnown RBP23.38■■□□□ 1.33
TSPAN17-209ENST00000515708 IFT140Q96RY7 1462 aa23.38■■□□□ 1.33
TSPAN17-209ENST00000515708 CNTLNQ9NXG0 1405 aa23.35■■□□□ 1.33
TSPAN17-209ENST00000515708 L3MBTL2Q969R5 705 aa23.35■■□□□ 1.33
TSPAN17-209ENST00000515708 FOXD1Q16676 465 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms